| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_022976 |
Definition |
Mycobacterium phage Nala, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
REFSEQ |
Length |
75894 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
147 |
%GC |
63.05 |
Number of singletons |
0 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_008858370.1 | NC_022976_p90 | Pnk | phrog_505 | polynucleotide kinase | other | 1 | 53471 | 54412 |
| YP_008858410.1 | NC_022976_p130 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 70183 | 70443 |
| YP_008858414.1 | NC_022976_p134 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 71609 | 71926 |
| YP_008858364.1 | NC_022976_p84 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51767 | 51955 |
| YP_008858387.1 | NC_022976_p107 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 62493 | 62804 |
| YP_008858316.1 | NC_022976_p36 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32730 | 33146 |
| YP_008858296.1 | NC_022976_p16 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 10097 | 10477 |
| YP_008858330.1 | NC_022976_p50 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36714 | 36860 |
| YP_008858313.1 | NC_022976_p33 | holin | phrog_526 | holin | lysis | 1 | 31165 | 31548 |
| YP_008858378.1 | NC_022976_p98 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57769 | 58212 |
| YP_008858327.1 | NC_022976_p47 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36087 | 36254 |
| YP_008858375.1 | NC_022976_p95 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56881 | 57141 |
| YP_008858295.1 | NC_022976_p15 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 9765 | 10100 |
| YP_008858345.1 | NC_022976_p65 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43337 | 43636 |
| YP_008858333.1 | NC_022976_p53 | integrase (Y-Int) | phrog_1 | integrase | integration and excision | 1 | 38095 | 38976 |
| YP_008858335.1 | NC_022976_p55 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39332 | 40105 |
| YP_008858423.1 | NC_022976_p143 | hypothetical protein | phrog_5130 | unknown function | unknown function | -1 | 74114 | 74305 |
| YP_008858392.1 | NC_022976_p112 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 64473 | 64952 |
| YP_008858352.1 | NC_022976_p72 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46660 | 46971 |
| YP_008858424.1 | NC_022976_p144 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74370 | 74729 |
| YP_008858288.1 | NC_022976_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1904 | 4567 |
| YP_008858286.1 | NC_022976_p6 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1309 | 1551 |
| YP_008858336.1 | NC_022976_p56 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 40200 | 40640 |
| YP_008858314.1 | NC_022976_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31541 | 31879 |
| YP_008858357.1 | NC_022976_p77 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48353 | 48586 |
| YP_008858318.1 | NC_022976_p38 | Lsr2-like protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33578 | 33964 |
| YP_008858356.1 | NC_022976_p76 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 48177 | 48350 |
| YP_008858408.1 | NC_022976_p128 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 69415 | 69678 |
| YP_008858302.1 | NC_022976_p22 | tapemeasure | phrog_2723 | tail length tape measure protein | tail | 1 | 13357 | 18093 |
| YP_008858390.1 | NC_022976_p110 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 63822 | 64085 |
| YP_008858374.1 | NC_022976_p94 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 56081 | 56884 |
| YP_008858391.1 | NC_022976_p111 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 64096 | 64470 |
| YP_008858309.1 | NC_022976_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28568 | 28996 |
| YP_008858373.1 | NC_022976_p93 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54701 | 56026 |
| YP_008858312.1 | NC_022976_p32 | LysA | phrog_317 | endolysin | lysis | 1 | 29659 | 31161 |
| YP_008858283.1 | NC_022976_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| YP_008858331.1 | NC_022976_p51 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36860 | 37255 |
| YP_008858405.1 | NC_022976_p125 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68759 | 68890 |
| YP_008858376.1 | NC_022976_p96 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 57158 | 57316 |
| YP_008858397.1 | NC_022976_p117 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 67078 | 67251 |
| YP_008858322.1 | NC_022976_p42 | hypothetical protein | phrog_2591 | unknown function | unknown function | -1 | 34918 | 35103 |
| YP_008858418.1 | NC_022976_p138 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 72839 | 73222 |
| YP_008858325.1 | NC_022976_p45 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 35804 | 35917 |
| YP_008858341.1 | NC_022976_p61 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 42076 | 42354 |
| YP_008858281.1 | NC_022976_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| YP_008858334.1 | NC_022976_p54 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 39115 | 39354 |
| YP_008858292.1 | NC_022976_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7435 | 8928 |
| YP_008858425.1 | NC_022976_p145 | hypothetical protein | phrog_8080 | unknown function | unknown function | -1 | 74776 | 74982 |
| YP_008858307.1 | NC_022976_p27 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24703 | 27543 |
| YP_008858297.1 | NC_022976_p17 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 10455 | 10859 |
| YP_008858338.1 | NC_022976_p58 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40952 | 41089 |
| YP_008858311.1 | NC_022976_p31 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29301 | 29585 |
| YP_008858372.1 | NC_022976_p92 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 54606 | 54704 |
| YP_008858308.1 | NC_022976_p28 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 27544 | 28488 |
| YP_008858409.1 | NC_022976_p129 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69675 | 70064 |
| YP_008858340.1 | NC_022976_p60 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41933 | 42079 |
| YP_008858399.1 | NC_022976_p119 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 67437 | 67691 |
| YP_008858347.1 | NC_022976_p67 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 43919 | 44251 |
| YP_008858294.1 | NC_022976_p14 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 9186 | 9752 |
| YP_008858368.1 | NC_022976_p88 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52763 | 53125 |
| YP_008858285.1 | NC_022976_p5 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 776 | 1237 |
| YP_008858359.1 | NC_022976_p79 | HNH domain protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48993 | 49310 |
| YP_008858348.1 | NC_022976_p68 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 44248 | 44577 |
| YP_008858360.1 | NC_022976_p80 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 49300 | 49536 |
| YP_008858332.1 | NC_022976_p52 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 37542 | 37865 |
| YP_008858380.1 | NC_022976_p100 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58582 | 59088 |
| YP_008858403.1 | NC_022976_p123 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68458 | 68583 |
| YP_008858382.1 | NC_022976_p102 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60310 | 60750 |
| YP_008858398.1 | NC_022976_p118 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 67226 | 67456 |
| YP_008858369.1 | NC_022976_p89 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 53122 | 53316 |
| YP_008858361.1 | NC_022976_p81 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49533 | 50183 |
| YP_008858406.1 | NC_022976_p126 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68901 | 69035 |
| YP_008858319.1 | NC_022976_p39 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34012 | 34209 |
| YP_008858329.1 | NC_022976_p49 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36480 | 36695 |
| YP_008858320.1 | NC_022976_p40 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34206 | 34670 |
| YP_008858291.1 | NC_022976_p11 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6346 | 7347 |
| YP_008858362.1 | NC_022976_p82 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 50180 | 50515 |
| YP_008858411.1 | NC_022976_p131 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 70440 | 70808 |
| YP_008858282.1 | NC_022976_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| YP_008858305.1 | NC_022976_p25 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21460 | 22293 |
| YP_008858422.1 | NC_022976_p142 | hypothetical protein | phrog_5970 | unknown function | unknown function | -1 | 73854 | 74111 |
| YP_008858290.1 | NC_022976_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4787 | 6343 |
| YP_008858371.1 | NC_022976_p91 | hypothetical protein | phrog_7164 | unknown function | unknown function | 1 | 54412 | 54609 |
| YP_008858326.1 | NC_022976_p46 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 35914 | 36087 |
| YP_008858289.1 | NC_022976_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4579 | 4800 |
| YP_008858328.1 | NC_022976_p48 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36251 | 36421 |
| YP_008858293.1 | NC_022976_p13 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8995 | 9186 |
| YP_008858379.1 | NC_022976_p99 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 58214 | 58549 |
| YP_008858385.1 | NC_022976_p105 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 61841 | 62197 |
| YP_008858306.1 | NC_022976_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22310 | 24706 |
| YP_008858301.1 | NC_022976_p21 | HNH domain protein | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 12841 | 13356 |
| YP_008858417.1 | NC_022976_p137 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72299 | 72835 |
| YP_008858300.1 | NC_022976_p20 | tail assembly chaperone | phrog_5940 | tail assembly chaperone | tail | 1 | 12570 | 12851 |
| YP_008858284.1 | NC_022976_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 783 |
| YP_008858420.1 | NC_022976_p140 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73397 | 73642 |
| YP_008858383.1 | NC_022976_p103 | Clp protease | phrog_94 | head maturation protease | head and packaging | 1 | 60839 | 61645 |
| YP_008858303.1 | NC_022976_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18123 | 19784 |
| YP_008858323.1 | NC_022976_p43 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 35096 | 35539 |
| YP_008858299.1 | NC_022976_p19 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11977 | 12438 |
| YP_008858401.1 | NC_022976_p121 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 68098 | 68265 |
| YP_008858389.1 | NC_022976_p109 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 63601 | 63825 |
| YP_008858366.1 | NC_022976_p86 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 52187 | 52408 |
| YP_008858339.1 | NC_022976_p59 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 41086 | 41931 |
| YP_008858310.1 | NC_022976_p30 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28983 | 29168 |
| YP_008858393.1 | NC_022976_p113 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64963 | 65748 |
| YP_008858363.1 | NC_022976_p83 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50508 | 51770 |
| YP_008858287.1 | NC_022976_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1551 | 1859 |
| YP_008858342.1 | NC_022976_p62 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 42663 | 42851 |
| YP_008858421.1 | NC_022976_p141 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 73639 | 73851 |
| YP_008858367.1 | NC_022976_p87 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 52401 | 52766 |
| YP_008858402.1 | NC_022976_p122 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68249 | 68449 |
| YP_008858321.1 | NC_022976_p41 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34667 | 34921 |
| YP_008858396.1 | NC_022976_p116 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66954 | 67091 |
| YP_008858324.1 | NC_022976_p44 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35536 | 35811 |
| YP_008858337.1 | NC_022976_p57 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40857 | 40955 |
| YP_008858351.1 | NC_022976_p71 | Erf | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45945 | 46667 |
| YP_008858358.1 | NC_022976_p78 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48583 | 48996 |
| YP_008858386.1 | NC_022976_p106 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 62198 | 62488 |
| YP_008858344.1 | NC_022976_p64 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 43222 | 43329 |
| YP_008858365.1 | NC_022976_p85 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51952 | 52212 |
| YP_008858388.1 | NC_022976_p108 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62857 | 63147 |
| YP_008858298.1 | NC_022976_p18 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10886 | 11857 |
| YP_008858377.1 | NC_022976_p97 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57313 | 57765 |
| YP_008858407.1 | NC_022976_p127 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 69037 | 69150 |
| YP_008858415.1 | NC_022976_p135 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 71932 | 72057 |
| YP_008858346.1 | NC_022976_p66 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43569 | 43730 |
| YP_008858394.1 | NC_022976_p114 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65745 | 65987 |
| YP_008858426.1 | NC_022976_p146 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75102 | 75323 |
| YP_008858404.1 | NC_022976_p124 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68580 | 68759 |
| YP_008858349.1 | NC_022976_p69 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44574 | 45542 |
| YP_008858384.1 | NC_022976_p104 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 61647 | 61844 |
| YP_008858353.1 | NC_022976_p73 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46971 | 47441 |
| YP_008858427.1 | NC_022976_p147 | HNH domain protein | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 75313 | 75660 |
| YP_008858354.1 | NC_022976_p74 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47441 | 47809 |
| YP_008858304.1 | NC_022976_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19856 | 21451 |
| YP_008858419.1 | NC_022976_p139 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73227 | 73400 |
| YP_008858355.1 | NC_022976_p75 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47812 | 48177 |
| YP_008858413.1 | NC_022976_p133 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71278 | 71607 |
| YP_008858350.1 | NC_022976_p70 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45539 | 45952 |
| YP_008858395.1 | NC_022976_p115 | RecA | phrog_97 | UvsX-like recombinase | other | 1 | 65995 | 66957 |
| YP_008858315.1 | NC_022976_p35 | LysB | phrog_102 | endolysin | lysis | 1 | 31876 | 32733 |
| YP_008858416.1 | NC_022976_p136 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72047 | 72283 |
| YP_008858412.1 | NC_022976_p132 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70805 | 71263 |
| YP_008858317.1 | NC_022976_p37 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33153 | 33398 |
| YP_008858381.1 | NC_022976_p101 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 59085 | 60317 |
| YP_008858343.1 | NC_022976_p63 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42898 | 43203 |
| YP_008858400.1 | NC_022976_p120 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67640 | 68101 |