Genomic map of Pseudomonas phage PAK_P4 (NC_022986)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022986
Definition
Pseudomonas phage PAK_P4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Pakpunavirus.
DB of origin
REFSEQ
Length
93147
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
172
%GC
49.26
Number of singletons
1
Number of paralogs
7

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008859230.1 NC_022986_p19 hypothetical protein phrog_817 tail fiber protein tail 1 14530 15291
YP_008859231.1 NC_022986_p20 hypothetical protein phrog_349 virion structural protein head and packaging 1 15297 15653
YP_008859289.1 NC_022986_p78 ribonucleoside-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 48196 49242
YP_008859233.1 NC_022986_p22 baseplate assembly protein phrog_11 baseplate spike tail 1 16564 17304
YP_008859222.1 NC_022986_p11 hypothetical protein phrog_205 tail sheath tail 1 7813 9099
YP_008859317.1 NC_022986_p106 hypothetical protein phrog_6818 unknown function unknown function 1 60822 61016
YP_008859267.1 NC_022986_p56 hypothetical protein phrog_3878 unknown function unknown function 1 37940 38338
YP_008859314.1 NC_022986_p103 hypothetical protein phrog_7542 unknown function unknown function 1 60002 60355
YP_008859318.1 NC_022986_p107 hypothetical protein phrog_4261 unknown function unknown function 1 61034 61330
YP_008859320.1 NC_022986_p109 hypothetical protein phrog_4025 unknown function unknown function 1 61584 61850
YP_008859290.1 NC_022986_p79 ribonucleoside-diphosphate reductase alpha chain phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 49235 50980
YP_008859213.1 NC_022986_p2 hypothetical protein phrog_113 portal protein head and packaging 1 1534 2973
YP_008859377.1 NC_022986_p165 hypothetical protein phrog_343 unknown function unknown function -1 87167 87391
YP_008859281.1 NC_022986_p70 hypothetical protein phrog_7135 unknown function unknown function 1 44749 44931
YP_008859269.1 NC_022986_p58 hypothetical protein phrog_6824 unknown function unknown function 1 38536 39246
YP_008859327.1 NC_022986_p116 hypothetical protein phrog_1585 unknown function unknown function 1 64714 64947
YP_008859378.1 NC_022986_p166 hypothetical protein phrog_6961 unknown function unknown function -1 87388 87573
YP_008859221.1 NC_022986_p10 hypothetical protein phrog_4087 unknown function unknown function 1 7237 7800
YP_008859338.1 NC_022986_p126 hypothetical protein phrog_7262 unknown function unknown function -1 69319 69729
YP_008859225.1 NC_022986_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10546 11046
YP_008859234.1 NC_022986_p23 hypothetical protein phrog_120 baseplate wedge subunit tail 1 17315 17686
YP_008859310.1 NC_022986_p99 hypothetical protein phrog_4323 unknown function unknown function 1 58145 58291
YP_008859313.1 NC_022986_p102 hypothetical protein phrog_5336 unknown function unknown function 1 59664 60002
YP_008859336.1 NC_022986_p124 hypothetical protein phrog_8631 unknown function unknown function 1 68848 69006
YP_008859255.1 NC_022986_p44 hypothetical protein phrog_4256 unknown function unknown function 1 30368 30757
YP_008859333.1 NC_022986_p122 hypothetical protein phrog_4955 unknown function unknown function 1 66666 66926
YP_008859381.1 NC_022986_p169 hypothetical protein phrog_5019 unknown function unknown function -1 88583 89050
YP_008859376.1 NC_022986_p164 hypothetical protein phrog_7505 unknown function unknown function -1 86981 87166
YP_008859265.1 NC_022986_p54 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 33213 35075
YP_008859287.1 NC_022986_p76 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 46872 47819
YP_008859345.1 NC_022986_p133 hypothetical protein phrog_7178 unknown function unknown function -1 72123 72338
YP_008859341.1 NC_022986_p129 hypothetical protein phrog_7742 unknown function unknown function -1 70847 71125
YP_008859236.1 NC_022986_p25 hypothetical protein phrog_587 structural protein head and packaging 1 19170 19901
YP_008859328.1 NC_022986_p117 hypothetical protein phrog_6876 unknown function unknown function 1 64972 65142
YP_008859340.1 NC_022986_p128 hypothetical protein phrog_7453 unknown function unknown function -1 70158 70844
YP_008859261.1 NC_022986_p50 hypothetical protein phrog_6310 unknown function unknown function 1 32416 32544
YP_008859312.1 NC_022986_p101 hypothetical protein phrog_2554 unknown function unknown function 1 58988 59659
YP_008859304.1 NC_022986_p93 hypothetical protein phrog_5201 unknown function unknown function 1 56607 56876
YP_008859335.1 NC_022986_p123 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 67726 68328
YP_008859372.1 NC_022986_p160 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 85404 86063
YP_008859227.1 NC_022986_p16 hypothetical protein phrog_1613 tail assembly chaperone tail 1 11539 11910
YP_008859301.1 NC_022986_p90 hypothetical protein phrog_6076 unknown function unknown function 1 53677 53877
YP_008859292.1 NC_022986_p81 hypothetical protein phrog_343 unknown function unknown function 1 51198 51425
YP_008859219.1 NC_022986_p8 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6447 6860
YP_008859273.1 NC_022986_p62 exodeoxyribonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 40957 42009
YP_008859218.1 NC_022986_p7 hypothetical protein phrog_1732 unknown function unknown function 1 5933 6409
YP_008859375.1 NC_022986_p163 hypothetical protein phrog_7048 unknown function unknown function -1 86668 86946
YP_008859366.1 NC_022986_p154 hypothetical protein phrog_2686 unknown function unknown function -1 82579 83043
YP_008859274.1 NC_022986_p63 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42006 42569
YP_008859279.1 NC_022986_p68 hypothetical protein phrog_4305 unknown function unknown function 1 43794 43976
YP_008859323.1 NC_022986_p112 hypothetical protein phrog_4261 unknown function unknown function 1 62597 62926
YP_008859305.1 NC_022986_p94 hypothetical protein phrog_6353 unknown function unknown function 1 56889 57032
YP_008859330.1 NC_022986_p119 hypothetical protein phrog_5746 unknown function unknown function 1 65668 65958
YP_008859229.1 NC_022986_p18 tape measure protein phrog_991 tail length tape measure protein tail 1 12167 14533
YP_008859346.1 NC_022986_p134 hypothetical protein phrog_6967 unknown function unknown function -1 72335 72676
YP_008859253.1 NC_022986_p42 hypothetical protein phrog_3754 unknown function unknown function 1 29593 30078
YP_008859315.1 NC_022986_p104 hypothetical protein phrog_15780 unknown function unknown function 1 60433 60546
YP_008859384.1 NC_022986_p172 hypothetical protein phrog_2255 HNH endonuclease DNA, RNA and nucleotide metabolism 1 90562 90972
YP_008859369.1 NC_022986_p157 hypothetical protein phrog_7094 unknown function unknown function -1 84680 84907
YP_008859347.1 NC_022986_p135 hypothetical protein phrog_3360 unknown function unknown function -1 72678 73181
YP_008859321.1 NC_022986_p110 hypothetical protein phrog_6935 unknown function unknown function 1 61847 62239
YP_008859223.1 NC_022986_p12 endonuclease phrog_314 homing endonuclease DNA, RNA and nucleotide metabolism 1 9158 9934
YP_008859322.1 NC_022986_p111 hypothetical protein phrog_6091 unknown function unknown function 1 62340 62585
YP_008859324.1 NC_022986_p113 hypothetical protein phrog_1106 unknown function unknown function 1 62962 63441
YP_008859266.1 NC_022986_p55 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 35136 37850
YP_008859244.1 NC_022986_p33 hypothetical protein phrog_4172 unknown function unknown function 1 25247 25552
YP_008859365.1 NC_022986_p153 cell wall hydrolase phrog_938 endolysin lysis -1 81961 82521
YP_008859354.1 NC_022986_p142 nicotinamide phosphoribosyltransferase family protein phrog_448 nicotinamide phosphoribosyl transferase other -1 75302 76990
YP_008859326.1 NC_022986_p115 hypothetical protein phrog_5680 unknown function unknown function 1 64116 64643
YP_008859272.1 NC_022986_p61 hypothetical protein phrog_6983 unknown function unknown function 1 40694 40915
YP_008859350.1 NC_022986_p138 hypothetical protein phrog_8023 unknown function unknown function -1 74143 74454
YP_008859247.1 NC_022986_p36 hypothetical protein phrog_7083 unknown function unknown function -1 26269 26589
YP_008859248.1 NC_022986_p37 hypothetical protein phrog_6945 unknown function unknown function -1 26591 27400
YP_008859270.1 NC_022986_p59 hypothetical protein phrog_2544 unknown function unknown function 1 39348 40352
YP_008859331.1 NC_022986_p120 hypothetical protein phrog_4310 unknown function unknown function 1 66040 66234
YP_008859224.1 NC_022986_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9947 10471
YP_008859343.1 NC_022986_p131 hypothetical protein phrog_2614 unknown function unknown function -1 71424 71786
YP_008859362.1 NC_022986_p150 phosphoesterase domain containing protein phrog_547 phosphoesterase other -1 80424 80978
YP_008859361.1 NC_022986_p149 hypothetical protein phrog_5447 unknown function unknown function -1 80175 80411
YP_008859342.1 NC_022986_p130 hypothetical protein phrog_7430 unknown function unknown function -1 71113 71424
YP_008859319.1 NC_022986_p108 hypothetical protein phrog_6913 unknown function unknown function 1 61327 61551
YP_008859216.1 NC_022986_p5 hypothetical protein phrog_49 head decoration head and packaging 1 4395 4805
YP_008859235.1 NC_022986_p24 baseplate related protein phrog_6 baseplate wedge subunit tail 1 17688 19151
YP_008859278.1 NC_022986_p67 hypothetical protein phrog_4305 unknown function unknown function 1 43622 43792
YP_008859240.1 NC_022986_p29 endolysin phrog_2860 endolysin head and packaging 1 23868 24428
YP_008859358.1 NC_022986_p146 RNA ligase 1 and tail attachment protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 78565 79482
YP_008859355.1 NC_022986_p143 hypothetical protein phrog_7663 unknown function unknown function -1 77047 77265
YP_008859237.1 NC_022986_p26 tail protein phrog_2282 tail fiber protein tail 1 19912 21924
YP_008859288.1 NC_022986_p77 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 47822 48166
YP_008859285.1 NC_022986_p74 hypothetical protein phrog_7063 3'-phosphatase, 5'-polynucleotide kinase other 1 45715 46665
YP_008859250.1 NC_022986_p39 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism -1 27551 28687
YP_008859353.1 NC_022986_p141 hypothetical protein phrog_6997 unknown function unknown function -1 75093 75290
YP_008859306.1 NC_022986_p95 hypothetical protein phrog_6871 unknown function unknown function 1 57032 57319
YP_008859299.1 NC_022986_p88 hypothetical protein phrog_6846 unknown function unknown function 1 53179 53373
YP_008859359.1 NC_022986_p147 hypothetical protein phrog_944 membrane protein moron, auxiliary metabolic gene and host takeover -1 79494 79901
YP_008859367.1 NC_022986_p155 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 83056 84264
YP_008859294.1 NC_022986_p83 hypothetical protein phrog_7088 unknown function unknown function 1 51658 51894
YP_008859351.1 NC_022986_p139 hypothetical protein phrog_6391 unknown function unknown function -1 74456 74605
YP_008859243.1 NC_022986_p32 hypothetical protein phrog_5388 Rz-like spanin lysis 1 25126 25257
YP_008859332.1 NC_022986_p121 hypothetical protein phrog_9686 unknown function unknown function 1 66450 66611
YP_008859300.1 NC_022986_p89 hypothetical protein phrog_5041 unknown function unknown function 1 53375 53614
YP_008859212.1 NC_022986_p1 terminase large subunit phrog_979 terminase large subunit head and packaging 1 1 1521
YP_008859374.1 NC_022986_p162 hypothetical protein phrog_6991 unknown function unknown function -1 86393 86671
YP_008859238.1 NC_022986_p27 hypothetical protein phrog_4628 tail fiber assembly tail 1 21961 22338
YP_008859360.1 NC_022986_p148 hypothetical protein phrog_2339 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 79898 80173
YP_008859246.1 NC_022986_p35 hypothetical protein phrog_2827 unknown function unknown function -1 25950 26258
YP_008859275.1 NC_022986_p64 hypothetical protein phrog_5822 unknown function unknown function 1 42566 42964
YP_008859352.1 NC_022986_p140 hypothetical protein phrog_335 phosphatase other -1 74617 75096
YP_008859380.1 NC_022986_p168 hypothetical protein phrog_5067 unknown function unknown function -1 88230 88586
YP_008859303.1 NC_022986_p92 hypothetical protein phrog_3768 unknown function unknown function 1 56056 56532
YP_008859239.1 NC_022986_p28 tail fiber protein phrog_2282 tail fiber protein tail 1 22352 23851
YP_008859307.1 NC_022986_p96 hypothetical protein phrog_5289 unknown function unknown function 1 57331 57564
YP_008859249.1 NC_022986_p38 hypothetical protein phrog_7461 unknown function unknown function -1 27393 27548
YP_008859220.1 NC_022986_p9 hypothetical protein phrog_939 head protein head and packaging 1 6860 7240
YP_008859295.1 NC_022986_p84 hypothetical protein phrog_9028 unknown function unknown function 1 51894 52208
YP_008859344.1 NC_022986_p132 hypothetical protein phrog_2614 unknown function unknown function -1 71783 72067
YP_008859337.1 NC_022986_p125 hypothetical protein phrog_7340 unknown function unknown function -1 69060 69326
YP_008859245.1 NC_022986_p34 hypothetical protein phrog_3899 unknown function unknown function 1 25588 25902
YP_008859258.1 NC_022986_p47 hypothetical protein phrog_4991 unknown function unknown function 1 31573 31875
YP_008859215.1 NC_022986_p4 hypothetical protein phrog_4103 unknown function unknown function 1 3450 4367
YP_008859259.1 NC_022986_p48 hypothetical protein phrog_7141 unknown function unknown function 1 31876 32298
YP_008859271.1 NC_022986_p60 hypothetical protein phrog_7883 unknown function unknown function 1 40433 40684
YP_008859379.1 NC_022986_p167 hypothetical protein phrog_1827 ATP-dependent protease other -1 87634 88182
YP_008859277.1 NC_022986_p66 hypothetical protein phrog_7013 unknown function unknown function 1 43188 43625
YP_008859264.1 NC_022986_p53 hypothetical protein phrog_7863 unknown function unknown function 1 32974 33159
YP_008859252.1 NC_022986_p41 hypothetical protein phrog_6163 unknown function unknown function 1 29393 29590
YP_008859383.1 NC_022986_p171 hypothetical protein phrog_3900 unknown function unknown function 1 89843 90166
YP_008859226.1 NC_022986_p15 hypothetical protein phrog_280 virion structural protein head and packaging 1 11046 11525
YP_008859280.1 NC_022986_p69 hypothetical protein phrog_221 metallo-phosphoesterase other 1 43973 44752
YP_008859286.1 NC_022986_p75 hypothetical protein phrog_9669 unknown function unknown function 1 46662 46817
YP_008859349.1 NC_022986_p137 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 73565 73963
YP_008859217.1 NC_022986_p6 major head capsid protein phrog_29 major head protein head and packaging 1 4849 5883
YP_008859214.1 NC_022986_p3 hypothetical protein phrog_1530 DNA methyltransferase other 1 2983 3453
YP_008859283.1 NC_022986_p72 hypothetical protein phrog_6971 unknown function unknown function 1 45171 45506
YP_008859263.1 NC_022986_p52 hypothetical protein phrog_6115 unknown function unknown function 1 32732 32977
YP_008859356.1 NC_022986_p144 ribose-phosphate pyrophosphokinase phrog_619 ribose-phosphate pyrophosphokinase other -1 77262 78128
YP_008859325.1 NC_022986_p114 hypothetical protein phrog_4273 unknown function unknown function 1 63525 64040
YP_008859251.1 NC_022986_p40 hypothetical protein phrog_4794 unknown function unknown function -1 28719 28952
YP_008859316.1 NC_022986_p105 hypothetical protein singleton unknown function unknown function 1 60629 60775
YP_008859268.1 NC_022986_p57 hypothetical protein phrog_7532 unknown function unknown function 1 38367 38534
YP_008859254.1 NC_022986_p43 hypothetical protein phrog_2834 unknown function unknown function 1 30112 30366
YP_008859382.1 NC_022986_p170 hypothetical protein phrog_10364 unknown function unknown function 1 89512 89700
YP_008859364.1 NC_022986_p152 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 81399 81959
YP_008859228.1 NC_022986_p17 hypothetical protein phrog_4625 unknown function unknown function 1 12018 12170
YP_008859368.1 NC_022986_p156 CMP/dCMP deaminase, zinc-binding phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 84261 84677
YP_008859284.1 NC_022986_p73 hypothetical protein phrog_7016 unknown function unknown function 1 45510 45722
YP_008859373.1 NC_022986_p161 hypothetical protein phrog_3948 unknown function unknown function -1 86065 86412
YP_008859363.1 NC_022986_p151 hypothetical protein phrog_6781 unknown function unknown function -1 80978 81409
YP_008859297.1 NC_022986_p86 hypothetical protein phrog_6863 unknown function unknown function 1 52424 52672
YP_008859260.1 NC_022986_p49 hypothetical protein phrog_18296 unknown function unknown function 1 32307 32423
YP_008859329.1 NC_022986_p118 hypothetical protein phrog_7753 unknown function unknown function 1 65198 65650
YP_008859309.1 NC_022986_p98 hypothetical protein phrog_2267 unknown function unknown function 1 57763 58071
YP_008859357.1 NC_022986_p145 hypothetical protein phrog_2071 ATPase other -1 78138 78554
YP_008859257.1 NC_022986_p46 hypothetical protein phrog_6917 unknown function unknown function 1 31406 31570
YP_008859293.1 NC_022986_p82 hypothetical protein phrog_6898 unknown function unknown function 1 51425 51658
YP_008859311.1 NC_022986_p100 hypothetical protein phrog_7133 unknown function unknown function 1 58529 58912
YP_008859232.1 NC_022986_p21 hypothetical protein phrog_196 baseplate hub tail 1 15650 16567
YP_008859296.1 NC_022986_p85 hypothetical protein phrog_7233 unknown function unknown function 1 52198 52383
YP_008859242.1 NC_022986_p31 hypothetical protein phrog_4349 Rz-like spanin lysis 1 24672 25115
YP_008859348.1 NC_022986_p136 hypothetical protein phrog_6932 unknown function unknown function -1 73168 73545
YP_008859241.1 NC_022986_p30 hypothetical protein phrog_5847 holin lysis 1 24446 24685
YP_008859291.1 NC_022986_p80 hypothetical protein phrog_5604 unknown function unknown function 1 51055 51201
YP_008859302.1 NC_022986_p91 hypothetical protein phrog_6266 unknown function unknown function 1 54045 55031
YP_008859370.1 NC_022986_p158 hypothetical protein phrog_2251 unknown function unknown function -1 84917 85129
YP_008859282.1 NC_022986_p71 hypothetical protein phrog_6873 unknown function unknown function 1 44943 45152
YP_008859298.1 NC_022986_p87 hypothetical protein phrog_6974 unknown function unknown function 1 52684 53169
YP_008859256.1 NC_022986_p45 hypothetical protein phrog_7101 unknown function unknown function 1 30754 31419
YP_008859371.1 NC_022986_p159 hypothetical protein phrog_5276 unknown function unknown function -1 85126 85395
YP_008859276.1 NC_022986_p65 hypothetical protein phrog_7621 unknown function unknown function 1 42961 43191
YP_008859308.1 NC_022986_p97 hypothetical protein phrog_6265 unknown function unknown function 1 57635 57763
YP_008859262.1 NC_022986_p51 RNA methyltransferase phrog_7814 unknown function unknown function 1 32531 32722
YP_008859339.1 NC_022986_p127 hypothetical protein phrog_6773 unknown function unknown function -1 69719 70135