Genomic map of Lactobacillus virus LLKu (NC_022989)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_022989
Definition
Lactobacillus phage LL-Ku, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cequinquevirus.
DB of origin
REFSEQ
Length
31080
Host Name
Lactobacillus delbrueckii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
41.6
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_008859627.1 NC_022989_p49 holin phrog_1299 holin lysis 1 29398 29706
YP_008859601.1 NC_022989_p23 hypothetical protein phrog_15036 unknown function unknown function 1 19066 19233
YP_008859617.1 NC_022989_p39 hypothetical protein phrog_888 unknown function unknown function 1 26328 26723
YP_008859582.1 NC_022989_p4 truncated GIY-YIG endonuclease singleton unknown function unknown function 1 3034 3177
YP_008859591.1 NC_022989_p13 major tail protein phrog_88 major tail protein tail 1 8339 8911
YP_008859612.1 NC_022989_p34 hypothetical protein phrog_13519 unknown function unknown function 1 23662 23814
YP_008859629.1 NC_022989_p51 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 30605 30985
YP_008859588.1 NC_022989_p10 head-tail adaptor phrog_25 head closure Hc1 connector 1 7214 7567
YP_008859621.1 NC_022989_p43 hypothetical protein phrog_13668 unknown function unknown function 1 27356 27622
YP_008859581.1 NC_022989_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1355 3034
YP_008859583.1 NC_022989_p5 portal protein phrog_12 portal protein head and packaging 1 3729 4943
YP_008859587.1 NC_022989_p9 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 6907 7203
YP_008859619.1 NC_022989_p41 hypothetical protein phrog_15640 unknown function unknown function 1 26958 27170
YP_008859596.1 NC_022989_p18 glycerophosphoryl diesterphosphodiesterase phrog_13515 phosphodiesterase other 1 13497 16133
YP_008859605.1 NC_022989_p27 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 20442 21047
YP_008859603.1 NC_022989_p25 hypothetical protein phrog_14315 unknown function unknown function 1 19858 20127
YP_008859613.1 NC_022989_p35 DNA replication protein phrog_678 replication initiation O-like DNA, RNA and nucleotide metabolism 1 23883 24674
YP_008859584.1 NC_022989_p6 ClpP protease phrog_80 head maturation protease head and packaging 1 4933 5538
YP_008859585.1 NC_022989_p7 major head protein phrog_10 major head protein head and packaging 1 5541 6728
YP_008859626.1 NC_022989_p48 hypothetical protein singleton unknown function unknown function 1 29139 29273
YP_008859598.1 NC_022989_p20 hypothetical protein phrog_13632 unknown function unknown function 1 18109 18468
YP_008859579.1 NC_022989_p1 hypothetical protein phrog_842 beta-glucosyl-HMC-alpha-glucosyltransferase other 1 90 938
YP_008859600.1 NC_022989_p22 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 18864 19139
YP_008859618.1 NC_022989_p40 hypothetical protein phrog_21051 unknown function unknown function 1 26750 26971
YP_008859589.1 NC_022989_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7567 7998
YP_008859623.1 NC_022989_p45 hypothetical protein phrog_15049 unknown function unknown function 1 27855 28103
YP_008859604.1 NC_022989_p26 hypothetical protein phrog_6244 unknown function unknown function 1 20114 20437
YP_008859597.1 NC_022989_p19 antireceptor phrog_1067 minor head protein head and packaging 1 16153 18096
YP_008859608.1 NC_022989_p30 hypothetical protein phrog_7566 unknown function unknown function 1 22028 22315
YP_008859586.1 NC_022989_p8 hypothetical protein phrog_6865 unknown function unknown function 1 6747 6914
YP_008859595.1 NC_022989_p17 hypothetical protein phrog_1084 unknown function unknown function 1 13145 13483
YP_008859611.1 NC_022989_p33 hypothetical protein phrog_25027 unknown function unknown function 1 23352 23660
YP_008859593.1 NC_022989_p15 tape measure protein phrog_58 tail length tape measure protein tail 1 9526 12432
YP_008859590.1 NC_022989_p12 hypothetical protein phrog_78 tail terminator connector 1 7991 8326
YP_008859609.1 NC_022989_p31 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 22308 22799
YP_008859614.1 NC_022989_p36 DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 24640 25458
YP_008859592.1 NC_022989_p14 hypothetical protein phrog_2115 tail protein tail 1 8931 9281
YP_008859624.1 NC_022989_p46 hypothetical protein singleton unknown function unknown function 1 28246 28587
YP_008859622.1 NC_022989_p44 hypothetical protein phrog_14354 unknown function unknown function 1 27619 27858
YP_008859625.1 NC_022989_p47 hypothetical protein phrog_14005 unknown function unknown function 1 28593 28766
YP_008859580.1 NC_022989_p2 hypothetical protein phrog_13845 unknown function unknown function 1 1000 1365
YP_008859606.1 NC_022989_p28 single-stranded DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 21037 21498
YP_008859616.1 NC_022989_p38 hypothetical protein phrog_9702 unknown function unknown function 1 26122 26310
YP_008859610.1 NC_022989_p32 Holliday junction resolvase phrog_1682 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 22796 23161
YP_008859620.1 NC_022989_p42 hypothetical protein phrog_16790 unknown function unknown function 1 27170 27325
YP_008859607.1 NC_022989_p29 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 21508 22047
YP_008859628.1 NC_022989_p50 lysin phrog_291 endolysin lysis 1 29699 30601
YP_008859594.1 NC_022989_p16 tail component phrog_33 distal tail protein Dit tail 1 12444 13148
YP_008859599.1 NC_022989_p21 hypothetical protein phrog_31868 unknown function unknown function 1 18380 18592
YP_008859615.1 NC_022989_p37 hypothetical protein phrog_37154 unknown function unknown function 1 25591 25989
YP_008859602.1 NC_022989_p24 hypothetical protein phrog_11717 unknown function unknown function 1 19226 19768