Genomic map of Rhizobium phage vB_RleS_L338C (NC_023502)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023502
Definition
Rhizobium phage vB_RleS_L338C, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
109558
Host Name
Rhizobium leguminosarum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
181
%GC
59
Number of singletons
141
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009003186.1 NC_023502_p29 hypothetical protein phrog_290 minor tail protein tail 1 20685 21896
YP_009003206.1 NC_023502_p49 hypothetical protein singleton unknown function unknown function 1 39999 40277
YP_009003208.1 NC_023502_p51 hypothetical protein singleton unknown function unknown function 1 42386 43024
YP_009003255.1 NC_023502_p98 hypothetical protein singleton unknown function unknown function 1 73372 73575
YP_009003184.1 NC_023502_p27 hypothetical protein singleton unknown function unknown function 1 20219 20485
YP_009003189.1 NC_023502_p32 hypothetical protein singleton unknown function unknown function 1 22764 23021
YP_009003296.1 NC_023502_p139 hypothetical protein singleton unknown function unknown function 1 85940 86299
YP_009003309.1 NC_023502_p152 hypothetical protein phrog_420 unknown function unknown function 1 91723 92280
YP_009003323.1 NC_023502_p166 hypothetical protein phrog_32858 unknown function unknown function 1 97585 97914
YP_009003283.1 NC_023502_p126 hypothetical protein singleton unknown function unknown function 1 81701 81817
YP_009003297.1 NC_023502_p140 hypothetical protein singleton unknown function unknown function 1 86311 86682
YP_009003300.1 NC_023502_p143 polysaccharidase protein singleton unknown function unknown function 1 88237 89034
YP_009003200.1 NC_023502_p43 tail assembly chaperone singleton unknown function unknown function 1 36918 37328
YP_009003173.1 NC_023502_p16 hypothetical protein singleton unknown function unknown function 1 10995 12563
YP_009003320.1 NC_023502_p163 hypothetical protein singleton unknown function unknown function 1 96444 96647
YP_009003159.1 NC_023502_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1258 3330
YP_009003205.1 NC_023502_p48 hypothetical protein singleton unknown function unknown function 1 39727 40026
YP_009003236.1 NC_023502_p79 ribonucleoside-thiphosphate reductase singleton unknown function unknown function 1 63264 64433
YP_009003250.1 NC_023502_p93 hypothetical protein singleton unknown function unknown function 1 70457 70648
YP_009003252.1 NC_023502_p95 hypothetical protein singleton unknown function unknown function 1 72022 72414
YP_009003290.1 NC_023502_p133 hypothetical protein singleton unknown function unknown function 1 83813 84067
YP_009003303.1 NC_023502_p146 hypothetical protein singleton unknown function unknown function 1 89473 89745
YP_009003336.1 NC_023502_p179 hypothetical protein singleton unknown function unknown function 1 107970 108452
YP_009003174.1 NC_023502_p17 portal protein phrog_12 portal protein head and packaging 1 12628 14388
YP_009003171.1 NC_023502_p14 hypothetical protein singleton unknown function unknown function 1 9854 10225
YP_009003262.1 NC_023502_p105 hypothetical protein singleton unknown function unknown function -1 75821 76021
YP_009003231.1 NC_023502_p74 hypothetical protein phrog_17202 unknown function unknown function 1 59795 61150
YP_009003292.1 NC_023502_p135 hypothetical protein singleton unknown function unknown function 1 84652 84972
YP_009003166.1 NC_023502_p9 hypothetical protein singleton unknown function unknown function 1 6734 7264
YP_009003326.1 NC_023502_p169 hypothetical protein phrog_32858 unknown function unknown function 1 101639 101962
YP_009003288.1 NC_023502_p131 hypothetical protein singleton unknown function unknown function 1 83218 83628
YP_009003334.1 NC_023502_p177 hypothetical protein singleton unknown function unknown function 1 106651 106956
YP_009003195.1 NC_023502_p38 tail assembly protein phrog_30 minor tail protein tail 1 28957 29796
YP_009003241.1 NC_023502_p84 hypothetical protein singleton unknown function unknown function 1 65475 65987
YP_009003267.1 NC_023502_p110 hypothetical protein singleton unknown function unknown function 1 77040 77219
YP_009003165.1 NC_023502_p8 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 6290 6532
YP_009003180.1 NC_023502_p23 hypothetical protein singleton unknown function unknown function 1 18508 18774
YP_009003226.1 NC_023502_p69 RecA protein phrog_97 UvsX-like recombinase other 1 56501 57595
YP_009003225.1 NC_023502_p68 hypothetical protein singleton unknown function unknown function 1 56107 56499
YP_009003217.1 NC_023502_p60 hypothetical protein singleton unknown function unknown function 1 50735 51148
YP_009003230.1 NC_023502_p73 crossover junction endodeoxyribonuclease RuvC protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 59086 59688
YP_009003280.1 NC_023502_p123 hypothetical protein singleton unknown function unknown function 1 80521 80733
YP_009003260.1 NC_023502_p103 hypothetical protein singleton unknown function unknown function 1 75345 75548
YP_009003210.1 NC_023502_p53 hypothetical protein singleton unknown function unknown function 1 43601 43819
YP_009003158.1 NC_023502_p1 hypothetical protein singleton unknown function unknown function 1 23 1261
YP_009003201.1 NC_023502_p44 hypothetical protein phrog_10540 unknown function unknown function 1 37418 37711
YP_009003274.1 NC_023502_p117 hypothetical protein singleton unknown function unknown function 1 78608 78814
YP_009003272.1 NC_023502_p115 hypothetical protein singleton unknown function unknown function 1 78224 78418
YP_009003234.1 NC_023502_p77 ribonucleoside-thiphosphate reductase singleton unknown function unknown function 1 62379 62879
YP_009003229.1 NC_023502_p72 hypothetical protein phrog_2506 exonuclease DNA, RNA and nucleotide metabolism 1 58265 59089
YP_009003332.1 NC_023502_p175 hypothetical protein singleton unknown function unknown function 1 105615 105935
YP_009003256.1 NC_023502_p99 hypothetical protein singleton unknown function unknown function 1 73604 73738
YP_009003182.1 NC_023502_p25 hypothetical protein singleton unknown function unknown function 1 19234 19572
YP_009003276.1 NC_023502_p119 hypothetical protein singleton unknown function unknown function 1 79172 79729
YP_009003291.1 NC_023502_p134 hypothetical protein singleton unknown function unknown function 1 84188 84655
YP_009003199.1 NC_023502_p42 hypothetical protein singleton unknown function unknown function 1 36533 36928
YP_009003219.1 NC_023502_p62 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 51651 52721
YP_009003251.1 NC_023502_p94 hypothetical protein singleton unknown function unknown function 1 71078 71926
YP_009003202.1 NC_023502_p45 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other 1 37892 38566
YP_009003293.1 NC_023502_p136 hypothetical protein singleton unknown function unknown function 1 84969 85316
YP_009003328.1 NC_023502_p171 hypothetical protein singleton unknown function unknown function 1 103976 104170
YP_009003168.1 NC_023502_p11 hypothetical protein singleton unknown function unknown function 1 8177 8443
YP_009003192.1 NC_023502_p35 tail tape measure domain containing protein singleton unknown function unknown function 1 26382 27944
YP_009003284.1 NC_023502_p127 hypothetical protein singleton unknown function unknown function 1 81817 82371
YP_009003279.1 NC_023502_p122 hypothetical protein singleton unknown function unknown function 1 80318 80524
YP_009003271.1 NC_023502_p114 hypothetical protein singleton unknown function unknown function 1 77937 78227
YP_009003269.1 NC_023502_p112 hypothetical protein singleton unknown function unknown function 1 77582 77758
YP_009003322.1 NC_023502_p165 hypothetical protein singleton unknown function unknown function 1 96904 97485
YP_009003338.1 NC_023502_p181 hypothetical protein phrog_21667 unknown function unknown function 1 108875 109519
YP_009003327.1 NC_023502_p170 hypothetical protein phrog_8480 lysophospholipase L1-like esterase other 1 101975 103822
YP_009003160.1 NC_023502_p3 hypothetical protein singleton unknown function unknown function 1 3382 3840
YP_009003211.1 NC_023502_p54 hypothetical protein phrog_38408 unknown function unknown function 1 43972 44340
YP_009003204.1 NC_023502_p47 hydrolase with a peptidoglycan binding domain singleton unknown function unknown function 1 38906 39730
YP_009003270.1 NC_023502_p113 hypothetical protein singleton unknown function unknown function 1 77755 77940
YP_009003295.1 NC_023502_p138 hypothetical protein singleton unknown function unknown function 1 85614 85943
YP_009003247.1 NC_023502_p90 co-activator of prophage gene expression IbrB phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 69252 69782
YP_009003175.1 NC_023502_p18 hypothetical protein singleton unknown function unknown function 1 14468 14875
YP_009003282.1 NC_023502_p125 hypothetical protein phrog_18249 unknown function unknown function 1 80968 81381
YP_009003319.1 NC_023502_p162 hypothetical protein singleton unknown function unknown function 1 96140 96454
YP_009003213.1 NC_023502_p56 hypothetical protein singleton unknown function unknown function 1 45942 46502
YP_009003176.1 NC_023502_p19 phage head morphogenesis protein singleton unknown function unknown function 1 15057 15434
YP_009003302.1 NC_023502_p145 hypothetical protein singleton unknown function unknown function 1 89354 89488
YP_009003246.1 NC_023502_p89 co-activator of prophage gene expression IbrA phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 68059 69135
YP_009003313.1 NC_023502_p156 hypothetical protein singleton unknown function unknown function 1 93663 94136
YP_009003243.1 NC_023502_p86 hypothetical protein singleton unknown function unknown function 1 66658 66879
YP_009003318.1 NC_023502_p161 hypothetical protein singleton unknown function unknown function 1 95781 96143
YP_009003311.1 NC_023502_p154 hypothetical protein singleton unknown function unknown function 1 92818 93207
YP_009003249.1 NC_023502_p92 hypothetical protein singleton unknown function unknown function 1 70222 70416
YP_009003181.1 NC_023502_p24 hypothetical protein singleton unknown function unknown function 1 18845 19228
YP_009003172.1 NC_023502_p15 hypothetical protein singleton unknown function unknown function 1 10281 10916
YP_009003273.1 NC_023502_p116 hypothetical protein singleton unknown function unknown function 1 78396 78611
YP_009003196.1 NC_023502_p39 tail assembly protein phrog_32 tail assembly protein tail 1 29786 30373
YP_009003266.1 NC_023502_p109 hypothetical protein singleton unknown function unknown function 1 76808 77098
YP_009003207.1 NC_023502_p50 AAA+ family ATPase phrog_8638 unknown function unknown function 1 40500 42173
YP_009003191.1 NC_023502_p34 tail tape measure protein phrog_3336 tail length tape measure protein tail 1 23467 26274
YP_009003278.1 NC_023502_p121 hypothetical protein singleton unknown function unknown function 1 80130 80321
YP_009003253.1 NC_023502_p96 hypothetical protein singleton unknown function unknown function 1 72580 72789
YP_009003238.1 NC_023502_p81 hypothetical protein singleton unknown function unknown function 1 64710 64916
YP_009003220.1 NC_023502_p63 hypothetical protein singleton unknown function unknown function 1 52774 53004
YP_009003304.1 NC_023502_p147 hypothetical protein phrog_1540 unknown function unknown function 1 89742 90134
YP_009003170.1 NC_023502_p13 hypothetical protein singleton unknown function unknown function 1 9301 9783
YP_009003248.1 NC_023502_p91 hypothetical protein singleton unknown function unknown function 1 69932 70225
YP_009003257.1 NC_023502_p100 hypothetical protein singleton unknown function unknown function 1 73731 73922
YP_009003221.1 NC_023502_p64 hypothetical protein singleton unknown function unknown function 1 53316 54116
YP_009003169.1 NC_023502_p12 hypothetical protein singleton unknown function unknown function 1 8587 9192
YP_009003177.1 NC_023502_p20 hypothetical protein phrog_15223 protease other 1 15522 16121
YP_009003218.1 NC_023502_p61 hypothetical protein singleton unknown function unknown function 1 51155 51658
YP_009003305.1 NC_023502_p148 hypothetical protein singleton unknown function unknown function 1 90131 90337
YP_009003317.1 NC_023502_p160 hypothetical protein singleton unknown function unknown function 1 95244 95654
YP_009003179.1 NC_023502_p22 capsid protein phrog_1623 virion structural protein head and packaging 1 17471 18430
YP_009003163.1 NC_023502_p6 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 5459 5932
YP_009003188.1 NC_023502_p31 hypothetical protein singleton unknown function unknown function 1 22213 22644
YP_009003167.1 NC_023502_p10 thymidylate synthase phrog_22708 thymidylate synthase DNA, RNA and nucleotide metabolism 1 7273 8001
YP_009003214.1 NC_023502_p57 replicative DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 46499 47797
YP_009003185.1 NC_023502_p28 hypothetical protein singleton unknown function unknown function 1 20488 20673
YP_009003258.1 NC_023502_p101 hypothetical protein singleton unknown function unknown function 1 73978 74490
YP_009003237.1 NC_023502_p80 hypothetical protein singleton unknown function unknown function 1 64430 64645
YP_009003329.1 NC_023502_p172 hypothetical protein singleton unknown function unknown function 1 104170 104604
YP_009003245.1 NC_023502_p88 DNA methyltransferase phrog_620 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 67288 67983
YP_009003264.1 NC_023502_p107 hypothetical protein singleton unknown function unknown function 1 76298 76543
YP_009003203.1 NC_023502_p46 hypothetical protein singleton unknown function unknown function 1 38544 38909
YP_009003190.1 NC_023502_p33 hypothetical protein singleton unknown function unknown function 1 23092 23394
YP_009003244.1 NC_023502_p87 hypothetical protein singleton unknown function unknown function 1 66876 67295
YP_009003240.1 NC_023502_p83 hypothetical protein singleton unknown function unknown function 1 65380 65475
YP_009003259.1 NC_023502_p102 hypothetical protein singleton unknown function unknown function 1 74604 75263
YP_009003224.1 NC_023502_p67 hypothetical protein singleton unknown function unknown function 1 55619 56095
YP_009003330.1 NC_023502_p173 hypothetical protein singleton unknown function unknown function 1 104604 105041
YP_009003289.1 NC_023502_p132 hypothetical protein singleton unknown function unknown function 1 83628 83816
YP_009003197.1 NC_023502_p40 tail fiber protein phrog_31 central tail fiber J tail 1 30389 35344
YP_009003233.1 NC_023502_p76 hypothetical protein singleton unknown function unknown function 1 62020 62379
YP_009003294.1 NC_023502_p137 hypothetical protein singleton unknown function unknown function 1 85432 85617
YP_009003209.1 NC_023502_p52 hypothetical protein singleton unknown function unknown function 1 43103 43546
YP_009003281.1 NC_023502_p124 hypothetical protein singleton unknown function unknown function 1 80730 80978
YP_009003194.1 NC_023502_p37 minor tail protein phrog_18 minor tail protein tail 1 28302 29009
YP_009003162.1 NC_023502_p5 hypothetical protein singleton unknown function unknown function 1 4505 5251
YP_009003198.1 NC_023502_p41 hypothetical protein singleton unknown function unknown function 1 35496 36536
YP_009003277.1 NC_023502_p120 hypothetical protein singleton unknown function unknown function 1 79816 80133
YP_009003178.1 NC_023502_p21 hypothetical protein singleton unknown function unknown function 1 16240 17415
YP_009003298.1 NC_023502_p141 hypothetical protein singleton unknown function unknown function 1 86700 86966
YP_009003268.1 NC_023502_p111 hypothetical protein singleton unknown function unknown function 1 77382 77585
YP_009003299.1 NC_023502_p142 PKD domain-containing protein singleton unknown function unknown function 1 87176 88255
YP_009003306.1 NC_023502_p149 hypothetical protein singleton unknown function unknown function 1 90327 90689
YP_009003232.1 NC_023502_p75 hypothetical protein phrog_4046 unknown function unknown function 1 61311 61901
YP_009003325.1 NC_023502_p168 hypothetical protein singleton unknown function unknown function 1 99859 101550
YP_009003263.1 NC_023502_p106 hypothetical protein singleton unknown function unknown function 1 76164 76286
YP_009003265.1 NC_023502_p108 hypothetical protein phrog_8785 unknown function unknown function 1 76584 76805
YP_009003321.1 NC_023502_p164 hypothetical protein singleton unknown function unknown function 1 96644 96904
YP_009003285.1 NC_023502_p128 hypothetical protein singleton unknown function unknown function 1 82358 82861
YP_009003314.1 NC_023502_p157 hypothetical protein singleton unknown function unknown function 1 94185 94418
YP_009003312.1 NC_023502_p155 hypothetical protein singleton unknown function unknown function 1 93200 93670
YP_009003223.1 NC_023502_p66 hypothetical protein singleton unknown function unknown function 1 55389 55619
YP_009003261.1 NC_023502_p104 hypothetical protein singleton unknown function unknown function 1 75560 75790
YP_009003216.1 NC_023502_p59 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 48627 50624
YP_009003287.1 NC_023502_p130 hypothetical protein singleton unknown function unknown function 1 83048 83155
YP_009003228.1 NC_023502_p71 hypothetical protein phrog_2002 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 57806 58171
YP_009003239.1 NC_023502_p82 HNH endonuclease phrog_11604 HNH endonuclease DNA, RNA and nucleotide metabolism 1 64916 65383
YP_009003324.1 NC_023502_p167 polysaccharidase singleton unknown function unknown function 1 98219 99874
YP_009003164.1 NC_023502_p7 hypothetical protein singleton unknown function unknown function 1 5947 6210
YP_009003315.1 NC_023502_p158 hypothetical protein singleton unknown function unknown function 1 94493 94699
YP_009003212.1 NC_023502_p55 hypothetical protein singleton unknown function unknown function 1 44527 45945
YP_009003235.1 NC_023502_p78 ribonucleoside-triphosphate reductase singleton unknown function unknown function 1 62845 63258
YP_009003183.1 NC_023502_p26 hypothetical protein singleton unknown function unknown function 1 19572 20210
YP_009003193.1 NC_023502_p36 minor tail protein phrog_14 minor tail protein tail 1 27949 28305
YP_009003227.1 NC_023502_p70 hypothetical protein singleton unknown function unknown function 1 57678 57806
YP_009003286.1 NC_023502_p129 hypothetical protein singleton unknown function unknown function 1 82845 83048
YP_009003161.1 NC_023502_p4 hypothetical protein singleton unknown function unknown function 1 3996 4493
YP_009003335.1 NC_023502_p178 hypothetical protein singleton unknown function unknown function 1 107231 107842
YP_009003337.1 NC_023502_p180 hypothetical protein singleton unknown function unknown function 1 108498 108875
YP_009003301.1 NC_023502_p144 hypothetical protein singleton unknown function unknown function 1 89118 89354
YP_009003222.1 NC_023502_p65 DNA repair protein RAD25 singleton unknown function unknown function 1 54511 55392
YP_009003187.1 NC_023502_p30 hypothetical protein singleton unknown function unknown function 1 21980 22162
YP_009003215.1 NC_023502_p58 DNA polymerase I singleton unknown function unknown function 1 47797 48687
YP_009003310.1 NC_023502_p153 hypothetical protein singleton unknown function unknown function 1 92273 92818
YP_009003254.1 NC_023502_p97 hypothetical protein singleton unknown function unknown function 1 72857 73285
YP_009003333.1 NC_023502_p176 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other 1 105939 106676
YP_009003308.1 NC_023502_p151 hypothetical protein singleton unknown function unknown function 1 91346 91726
YP_009003331.1 NC_023502_p174 hypothetical protein singleton unknown function unknown function 1 105130 105480
YP_009003275.1 NC_023502_p118 hypothetical protein singleton unknown function unknown function 1 78817 79179
YP_009003316.1 NC_023502_p159 hypothetical protein singleton unknown function unknown function 1 94880 95263
YP_009003307.1 NC_023502_p150 periplasmic protein singleton unknown function unknown function 1 90759 91295
YP_009003242.1 NC_023502_p85 hypothetical protein singleton unknown function unknown function 1 66240 66596