Genomic map of Streptococcus phage 20617 (NC_023503)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023503
Definition
Streptococcus phage 20617 complete prophage genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
48800
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
68
%GC
39.97
Number of singletons
7
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009003370.1 NC_023503_p32 hypothetical protein phrog_98 unknown function unknown function 1 16177 16611
YP_009003398.1 NC_023503_p60 hypothetical protein phrog_12732 unknown function unknown function 1 41745 42089
YP_009003361.1 NC_023503_p23 hypothetical protein phrog_1982 unknown function unknown function 1 13325 13564
YP_009003393.1 NC_023503_p55 hypothetical protein phrog_1060 unknown function unknown function 1 39233 39655
YP_009003356.1 NC_023503_p18 hypothetical protein phrog_3159 unknown function unknown function 1 10446 10628
YP_009003339.1 NC_023503_p1 glycerate kinase singleton unknown function unknown function 1 112 966
YP_009003355.1 NC_023503_p17 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 9667 10449
YP_009003376.1 NC_023503_p38 phage portal protein phrog_64 portal protein head and packaging 1 20127 21626
YP_009003382.1 NC_023503_p44 hypothetical protein phrog_132 head-tail adaptor connector 1 24932 25276
YP_009003371.1 NC_023503_p33 hypothetical protein phrog_24146 unknown function unknown function 1 16608 16856
YP_009003366.1 NC_023503_p28 hypothetical protein singleton unknown function unknown function 1 14840 14956
YP_009003396.1 NC_023503_p58 phage holin phrog_297 holin lysis 1 40171 40413
YP_009003401.1 NC_023503_p63 hypothetical protein phrog_11483 unknown function unknown function 1 42965 43144
YP_009003394.1 NC_023503_p56 hypothetical protein phrog_1567 unknown function unknown function 1 39679 39825
YP_009003399.1 NC_023503_p61 hypothetical protein phrog_4964 unknown function unknown function 1 42111 42662
YP_009003354.1 NC_023503_p16 phage replication initiation protein phrog_29927 replication initiation protein DNA, RNA and nucleotide metabolism 1 9226 9654
YP_009003367.1 NC_023503_p29 hypothetical protein phrog_121 unknown function unknown function 1 14977 15480
YP_009003388.1 NC_023503_p50 hypothetical protein phrog_441 tail assembly chaperone tail 1 27313 27630
YP_009003341.1 NC_023503_p3 enolase phrog_35063 unknown function unknown function 1 1669 2973
YP_009003349.1 NC_023503_p11 excisionase phrog_904 excisionase integration and excision 1 7457 7726
YP_009003392.1 NC_023503_p54 phage capsid and scaffold protein phrog_372 tail protein tail 1 37208 39217
YP_009003390.1 NC_023503_p52 phage capsid and scaffold protein phrog_202 distal tail protein Dit tail 1 32236 33771
YP_009003377.1 NC_023503_p39 hypothetical protein phrog_115 minor head protein head and packaging 1 21630 22523
YP_009003360.1 NC_023503_p22 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 12867 13328
YP_009003406.1 NC_023503_p68 3-dehydroquinate dehydratase I singleton unknown function unknown function 1 47945 48622
YP_009003384.1 NC_023503_p46 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 25587 25925
YP_009003359.1 NC_023503_p21 single stranded DNA-binding protein phage associated phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 12393 12857
YP_009003381.1 NC_023503_p43 hypothetical protein phrog_5279 unknown function unknown function 1 24759 24914
YP_009003373.1 NC_023503_p35 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 17846 18262
YP_009003386.1 NC_023503_p48 phage tail protein phrog_238 major tail protein tail 1 26325 26831
YP_009003405.1 NC_023503_p67 methyltransferase phrog_26699 DNA methyltransferase other 1 46785 47948
YP_009003344.1 NC_023503_p6 cl-like repressor phrog_87 metallo-protease other -1 4852 5220
YP_009003364.1 NC_023503_p26 hypothetical protein phrog_35322 unknown function unknown function 1 13932 14114
YP_009003363.1 NC_023503_p25 hypothetical protein phrog_1489 unknown function unknown function 1 13722 13883
YP_009003372.1 NC_023503_p34 hypothetical protein phrog_1814 unknown function unknown function 1 16926 17633
YP_009003340.1 NC_023503_p2 hypothetical protein singleton unknown function unknown function -1 1005 1460
YP_009003374.1 NC_023503_p36 phage terminase small subunit phrog_51 terminase small subunit head and packaging 1 18444 18896
YP_009003383.1 NC_023503_p45 hypothetical protein phrog_348 minor head protein head and packaging 1 25273 25587
YP_009003347.1 NC_023503_p9 hypothetical protein phrog_1733 unknown function unknown function 1 6008 6910
YP_009003380.1 NC_023503_p42 phage major capsid protein phrog_29 major head protein head and packaging 1 23697 24743
YP_009003400.1 NC_023503_p62 hypothetical protein phrog_16094 unknown function unknown function 1 42688 42939
YP_009003378.1 NC_023503_p40 phage capsid and scaffold protein phrog_172 head scaffolding protein head and packaging 1 22705 23298
YP_009003353.1 NC_023503_p15 hypothetical protein phrog_5968 replisome organizer DNA, RNA and nucleotide metabolism 1 8807 9253
YP_009003402.1 NC_023503_p64 hypothetical protein phrog_8 transcriptional regulator transcription regulation 1 43203 43625
YP_009003391.1 NC_023503_p53 phage capsid and scaffold protein phrog_588 tail fiber protein and host specificity tail 1 33771 37205
YP_009003387.1 NC_023503_p49 hypothetical protein phrog_183 tail chaperone protein tail 1 26909 27262
YP_009003397.1 NC_023503_p59 phage lysin phrog_998 endolysin lysis 1 40415 41260
YP_009003342.1 NC_023503_p4 phage integrase phrog_1 integrase integration and excision -1 3033 4202
YP_009003362.1 NC_023503_p24 hypothetical protein phrog_803 host nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 13552 13725
YP_009003348.1 NC_023503_p10 hypothetical protein phrog_2902 anti-repressor transcription regulation 1 6903 7451
YP_009003351.1 NC_023503_p13 hypothetical protein phrog_17359 unknown function unknown function 1 8150 8413
YP_009003346.1 NC_023503_p8 cro-repressor phrog_3 transcriptional repressor transcription regulation 1 5763 5990
YP_009003357.1 NC_023503_p19 recombination function protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10754 11410
YP_009003343.1 NC_023503_p5 hypothetical protein phrog_4980 superinfection exclusion moron, auxiliary metabolic gene and host takeover -1 4344 4772
YP_009003403.1 NC_023503_p65 hypothetical protein singleton unknown function unknown function -1 44090 44275
YP_009003368.1 NC_023503_p30 phage DNA-binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 15481 15903
YP_009003389.1 NC_023503_p51 phage tail fiber phrog_1204 tail protein tail 1 27620 32236
YP_009003352.1 NC_023503_p14 hypothetical protein phrog_1022 unknown function unknown function 1 8432 8590
YP_009003395.1 NC_023503_p57 hypothetical protein phrog_1296 holin lysis 1 39839 40162
YP_009003379.1 NC_023503_p41 phage major capsid protein phrog_909 major head protein head and packaging 1 23315 23674
YP_009003350.1 NC_023503_p12 hypothetical protein singleton unknown function unknown function 1 7704 8012
YP_009003369.1 NC_023503_p31 hypothetical protein phrog_884 unknown function unknown function 1 15872 16180
YP_009003404.1 NC_023503_p66 lipoteichoic acid synthase singleton unknown function unknown function -1 44437 46479
YP_009003385.1 NC_023503_p47 hypothetical protein phrog_176 tail terminator connector 1 25927 26313
YP_009003375.1 NC_023503_p37 phage terminase small subunit phrog_2 terminase large subunit head and packaging 1 18883 20118
YP_009003345.1 NC_023503_p7 cl-like repressor phage associated phrog_8 transcriptional regulator transcription regulation -1 5227 5577
YP_009003365.1 NC_023503_p27 hypothetical protein phrog_121 unknown function unknown function 1 14242 14856
YP_009003358.1 NC_023503_p20 hypothetical protein phrog_674 unknown function unknown function 1 11413 12372