Genomic map of Mycobacterium phage Donovan (NC_023552)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023552
Definition
Mycobacterium phage Donovan, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus.
DB of origin
REFSEQ
Length
47162
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
78
%GC
67.18
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009004436.1 NC_023552_p65 hypothetical protein phrog_908 unknown function unknown function 1 42034 42936
YP_009004423.1 NC_023552_p52 hypothetical protein phrog_2233 unknown function unknown function 1 35711 36400
YP_009004425.1 NC_023552_p54 HTH DNA binding protein phrog_17383 DNA binding protein DNA, RNA and nucleotide metabolism 1 36798 37037
YP_009004392.1 NC_023552_p21 minor tail protein phrog_3493 minor tail protein tail 1 19027 21288
YP_009004408.1 NC_023552_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29365 29763
YP_009004399.1 NC_023552_p28 hypothetical protein phrog_443 holin lysis 1 25229 25477
YP_009004377.1 NC_023552_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5299 6243
YP_009004393.1 NC_023552_p22 minor tail protein phrog_416 minor tail protein tail 1 21288 22325
YP_009004374.1 NC_023552_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3569
YP_009004373.1 NC_023552_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
YP_009004375.1 NC_023552_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3560 4894
YP_009004433.1 NC_023552_p62 HTH DNA binding protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 40357 41247
YP_009004402.1 NC_023552_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26968 27369
YP_009004409.1 NC_023552_p38 hypothetical protein phrog_658 unknown function unknown function 1 29827 30333
YP_009004439.1 NC_023552_p68 hypothetical protein phrog_10505 unknown function unknown function 1 43456 43638
YP_009004382.1 NC_023552_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7645 7914
YP_009004428.1 NC_023552_p57 DNA methylase phrog_67 DNA methyltransferase other 1 37840 39126
YP_009004416.1 NC_023552_p45 hypothetical protein phrog_4702 unknown function unknown function 1 31494 31643
YP_009004420.1 NC_023552_p49 FtsK phrog_6152 unknown function unknown function 1 33944 35011
YP_009004415.1 NC_023552_p44 hypothetical protein phrog_11260 unknown function unknown function 1 31408 31494
YP_009004410.1 NC_023552_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30333 30566
YP_009004427.1 NC_023552_p56 hypothetical protein phrog_5921 unknown function unknown function 1 37695 37847
YP_009004418.1 NC_023552_p47 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32566 33558
YP_009004413.1 NC_023552_p42 hypothetical protein phrog_5559 unknown function unknown function 1 31104 31283
YP_009004432.1 NC_023552_p61 hypothetical protein phrog_2451 unknown function unknown function 1 40222 40356
YP_009004442.1 NC_023552_p71 hypothetical protein phrog_2202 unknown function unknown function 1 44563 44889
YP_009004396.1 NC_023552_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22868 23038
YP_009004384.1 NC_023552_p13 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 8288 8725
YP_009004372.1 NC_023552_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
YP_009004438.1 NC_023552_p67 hypothetical protein phrog_2074 unknown function unknown function 1 43202 43456
YP_009004398.1 NC_023552_p27 lysin B phrog_102 endolysin lysis 1 24041 25207
YP_009004449.1 NC_023552_p78 hypothetical protein phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46571 46954
YP_009004411.1 NC_023552_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30563 30838
YP_009004378.1 NC_023552_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6243 6590
YP_009004403.1 NC_023552_p32 Xis phrog_66 excisionase and transcriptional regulator integration and excision 1 27486 27731
YP_009004395.1 NC_023552_p24 hypothetical protein phrog_240 head protein head and packaging 1 22506 22868
YP_009004385.1 NC_023552_p14 major tail subunit phrog_476 major tail protein tail 1 8819 9817
YP_009004441.1 NC_023552_p70 hypothetical protein phrog_7429 unknown function unknown function 1 44287 44499
YP_009004431.1 NC_023552_p60 hypothetical protein phrog_3008 DNA methyltransferase other 1 39971 40225
YP_009004414.1 NC_023552_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31280 31411
YP_009004440.1 NC_023552_p69 hypothetical protein phrog_5855 unknown function unknown function 1 43711 44211
YP_009004445.1 NC_023552_p74 hypothetical protein phrog_4738 transcriptional repressor transcription regulation 1 45256 45429
YP_009004391.1 NC_023552_p20 minor tail protein phrog_732 minor tail protein tail 1 18133 19026
YP_009004421.1 NC_023552_p50 RusA phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35008 35508
YP_009004419.1 NC_023552_p48 hypothetical protein phrog_4387 unknown function unknown function 1 33555 33947
YP_009004407.1 NC_023552_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29117 29365
YP_009004383.1 NC_023552_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7914 8291
YP_009004387.1 NC_023552_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9933 10532
YP_009004424.1 NC_023552_p53 DNA methylase phrog_2060 DNA methyltransferase other 1 36400 36801
YP_009004397.1 NC_023552_p26 lysin A phrog_6707 endolysin lysis 1 23109 24044
YP_009004430.1 NC_023552_p59 hypothetical protein phrog_7789 unknown function unknown function 1 39907 39996
YP_009004405.1 NC_023552_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27961 28824
YP_009004376.1 NC_023552_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4896 5261
YP_009004446.1 NC_023552_p75 hypothetical protein phrog_6617 unknown function unknown function 1 45628 45966
YP_009004401.2 NC_023552_p30 integrase phrog_1 integrase integration and excision -1 25908 26897
YP_009004379.1 NC_023552_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6594 6956
YP_009004404.1 NC_023552_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27728 27964
YP_009004406.1 NC_023552_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28821 29120
YP_009004448.1 NC_023552_p77 hypothetical protein phrog_7285 unknown function unknown function 1 46318 46566
YP_009004434.1 NC_023552_p63 hypothetical protein phrog_3599 unknown function unknown function 1 41244 41774
YP_009004444.1 NC_023552_p73 hypothetical protein phrog_10254 unknown function unknown function 1 45056 45247
YP_009004394.1 NC_023552_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22340 22489
YP_009004388.1 NC_023552_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10865 14632
YP_009004386.1 NC_023552_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9933 10851
YP_009004447.1 NC_023552_p76 hypothetical protein phrog_1186 unknown function unknown function 1 45963 46331
YP_009004380.1 NC_023552_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6956 7306
YP_009004389.1 NC_023552_p18 minor tail protein phrog_106 minor tail protein tail 1 14629 16374
YP_009004417.1 NC_023552_p46 RecE phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31640 32569
YP_009004443.1 NC_023552_p72 hypothetical protein phrog_4550 unknown function unknown function 1 44886 45059
YP_009004390.1 NC_023552_p19 minor tail protein phrog_110 minor tail protein tail 1 16374 18110
YP_009004400.1 NC_023552_p29 hypothetical protein phrog_404 minor tail protein tail 1 25474 25833
YP_009004412.1 NC_023552_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30835 31107
YP_009004426.1 NC_023552_p55 HTH DNA binding protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 37034 37702
YP_009004422.1 NC_023552_p51 hypothetical protein phrog_10863 unknown function unknown function 1 35505 35714
YP_009004435.1 NC_023552_p64 hypothetical protein phrog_7254 unknown function unknown function 1 41771 42037
YP_009004437.1 NC_023552_p66 hypothetical protein phrog_16825 unknown function unknown function 1 42933 43205
YP_009004429.1 NC_023552_p58 hypothetical protein phrog_25269 unknown function unknown function 1 39119 39907
YP_009004381.1 NC_023552_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7322 7645