Genomic map of Mycobacterium phage Echild (NC_023553)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023553
Definition
Mycobacterium phage Echild, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
53159
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
63.69
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009004493.1 NC_023553_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28991 30778
YP_009004451.1 NC_023553_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 662 1495
YP_009004460.1 NC_023553_p11 lysin B phrog_102 endolysin lysis 1 6541 7518
YP_009004498.1 NC_023553_p49 ThyX-like protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31795 32520
YP_009004488.1 NC_023553_p39 hypothetical protein phrog_383 unknown function unknown function -1 27555 27938
YP_009004505.1 NC_023553_p56 phosphoesterase phrog_221 metallo-phosphoesterase other -1 36365 37135
YP_009004492.1 NC_023553_p43 hypothetical protein phrog_896 unknown function unknown function -1 28742 28960
YP_009004458.1 NC_023553_p9 lysin A phrog_317 endolysin lysis 1 4797 6086
YP_009004497.1 NC_023553_p48 hypothetical protein phrog_690 unknown function unknown function -1 31584 31793
YP_009004514.1 NC_023553_p65 hypothetical protein singleton unknown function unknown function -1 40203 40463
YP_009004462.1 NC_023553_p13 portal protein phrog_104 portal protein head and packaging 1 9325 10788
YP_009004539.1 NC_023553_p90 hypothetical protein phrog_9713 unknown function unknown function -1 48815 48883
YP_009004527.1 NC_023553_p78 hypothetical protein phrog_4294 unknown function unknown function -1 45640 45798
YP_009004513.1 NC_023553_p64 hydrolase phrog_789 esterase/lipase other -1 39364 40203
YP_009004540.1 NC_023553_p91 hypothetical protein phrog_2223 unknown function unknown function -1 48880 49146
YP_009004537.1 NC_023553_p88 hypothetical protein phrog_855 unknown function unknown function -1 48371 48508
YP_009004499.1 NC_023553_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32600 33130
YP_009004545.1 NC_023553_p96 hypothetical protein phrog_3207 unknown function unknown function -1 50185 50475
YP_009004521.1 NC_023553_p72 hypothetical protein phrog_666 unknown function unknown function -1 42760 42954
YP_009004467.1 NC_023553_p18 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13473 13850
YP_009004483.1 NC_023553_p34 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 26075 26632
YP_009004509.1 NC_023553_p60 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38184 38573
YP_009004455.1 NC_023553_p6 hypothetical protein phrog_226 minor tail protein tail 1 3007 3477
YP_009004471.1 NC_023553_p22 hypothetical protein phrog_123 tail terminator connector 1 14751 15176
YP_009004520.1 NC_023553_p71 hypothetical protein phrog_520 unknown function unknown function -1 42492 42731
YP_009004456.1 NC_023553_p7 hypothetical protein phrog_1260 minor tail protein tail 1 3559 4524
YP_009004544.1 NC_023553_p95 hypothetical protein phrog_1556 unknown function unknown function -1 49892 50188
YP_009004519.1 NC_023553_p70 hypothetical protein phrog_1540 unknown function unknown function -1 42118 42495
YP_009004476.1 NC_023553_p27 minor tail protein phrog_106 minor tail protein tail 1 19279 20295
YP_009004549.1 NC_023553_p100 hypothetical protein phrog_1676 unknown function unknown function -1 51660 51953
YP_009004480.1 NC_023553_p31 minor tail protein phrog_737 minor tail protein tail 1 22854 25181
YP_009004468.1 NC_023553_p19 hypothetical protein phrog_830 head-tail connector protein connector 1 13847 14041
YP_009004464.1 NC_023553_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11720 12232
YP_009004472.1 NC_023553_p23 major tail subunit phrog_117 major tail protein tail 1 15194 15787
YP_009004470.1 NC_023553_p21 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14406 14741
YP_009004535.1 NC_023553_p86 hypothetical protein singleton unknown function unknown function -1 47557 47619
YP_009004461.1 NC_023553_p12 terminase phrog_9 terminase large subunit head and packaging 1 7541 9328
YP_009004517.1 NC_023553_p68 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41174 41980
YP_009004475.1 NC_023553_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 16721 19258
YP_009004536.1 NC_023553_p87 hypothetical protein phrog_421 unknown function unknown function -1 47616 48371
YP_009004454.1 NC_023553_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2672 2968
YP_009004542.1 NC_023553_p93 hypothetical protein phrog_519 unknown function unknown function -1 49525 49692
YP_009004465.1 NC_023553_p16 major capsid protein phrog_10 major head protein head and packaging 1 12262 13218
YP_009004507.1 NC_023553_p58 NrdH-like protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37452 37724
YP_009004450.1 NC_023553_p1 hypothetical protein phrog_7736 unknown function unknown function 1 330 443
YP_009004459.1 NC_023553_p10 holin phrog_526 holin lysis 1 6083 6544
YP_009004478.1 NC_023553_p29 minor tail protein phrog_352 minor tail protein tail 1 22081 22527
YP_009004500.1 NC_023553_p51 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33127 35166
YP_009004466.1 NC_023553_p17 hypothetical protein phrog_748 head-tail connector protein connector 1 13288 13470
YP_009004457.1 NC_023553_p8 hypothetical protein phrog_1087 unknown function unknown function 1 4639 4797
YP_009004515.1 NC_023553_p66 hypothetical protein phrog_397 unknown function unknown function -1 40460 40693
YP_009004495.1 NC_023553_p46 hypothetical protein phrog_3812 unknown function unknown function -1 30977 31165
YP_009004522.1 NC_023553_p73 hypothetical protein phrog_642 unknown function unknown function -1 42951 43175
YP_009004485.1 NC_023553_p36 hypothetical protein singleton unknown function unknown function 1 26911 27204
YP_009004490.1 NC_023553_p41 hypothetical protein phrog_3771 unknown function unknown function -1 28231 28515
YP_009004543.1 NC_023553_p94 hypothetical protein phrog_1946 unknown function unknown function -1 49689 49889
YP_009004525.1 NC_023553_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 44502 45077
YP_009004532.1 NC_023553_p83 hypothetical protein phrog_3351 unknown function unknown function -1 46894 47127
YP_009004546.1 NC_023553_p97 hypothetical protein phrog_1617 unknown function unknown function -1 50496 51377
YP_009004506.1 NC_023553_p57 hypothetical protein phrog_474 phosphofructokinase other -1 37132 37455
YP_009004512.1 NC_023553_p63 hypothetical protein phrog_2187 unknown function unknown function -1 39251 39367
YP_009004486.1 NC_023553_p37 hypothetical protein phrog_9463 unknown function unknown function -1 27314 27499
YP_009004526.1 NC_023553_p77 hypothetical protein phrog_1173 unknown function unknown function -1 45329 45496
YP_009004523.1 NC_023553_p74 RecB-like recombinase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43221 44033
YP_009004484.1 NC_023553_p35 ParB phrog_38291 unknown function unknown function 1 26632 26898
YP_009004469.1 NC_023553_p20 hypothetical protein phrog_320 head closure Hc1 connector 1 14038 14406
YP_009004510.1 NC_023553_p61 hypothetical protein phrog_1370 unknown function unknown function -1 38655 38786
YP_009004479.1 NC_023553_p30 minor tail protein phrog_404 minor tail protein tail 1 22524 22853
YP_009004528.1 NC_023553_p79 hypothetical protein phrog_4569 unknown function unknown function -1 45798 46073
YP_009004538.1 NC_023553_p89 hypothetical protein phrog_3718 unknown function unknown function -1 48519 48818
YP_009004547.1 NC_023553_p98 hypothetical protein phrog_2499 unknown function unknown function -1 51374 51550
YP_009004453.1 NC_023553_p4 hypothetical protein phrog_3585 immunity protein other 1 2337 2675
YP_009004474.1 NC_023553_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15899 16306
YP_009004481.1 NC_023553_p32 hypothetical protein phrog_2570 unknown function unknown function 1 25256 25444
YP_009004548.1 NC_023553_p99 hypothetical protein phrog_1445 unknown function unknown function -1 51547 51630
YP_009004503.1 NC_023553_p54 transcription factor phrog_354 sigma-K factor transcription regulation -1 35529 36212
YP_009004501.1 NC_023553_p52 hypothetical protein phrog_2046 unknown function unknown function -1 35166 35369
YP_009004518.1 NC_023553_p69 hypothetical protein phrog_2731 unknown function unknown function -1 41990 42121
YP_009004524.1 NC_023553_p75 hypothetical protein phrog_1562 unknown function unknown function -1 44030 44443
YP_009004491.1 NC_023553_p42 hypothetical protein phrog_3283 unknown function unknown function -1 28515 28742
YP_009004533.1 NC_023553_p84 hypothetical protein phrog_1477 unknown function unknown function -1 47127 47255
YP_009004489.1 NC_023553_p40 hypothetical protein phrog_2099 unknown function unknown function -1 27935 28234
YP_009004508.1 NC_023553_p59 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37724 38356
YP_009004482.1 NC_023553_p33 hypothetical protein singleton unknown function unknown function 1 25457 25939
YP_009004477.1 NC_023553_p28 minor tail protein phrog_110 minor tail protein tail 1 20292 22064
YP_009004463.1 NC_023553_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10785 11669
YP_009004502.1 NC_023553_p53 hypothetical protein phrog_499 unknown function unknown function -1 35366 35545
YP_009004494.1 NC_023553_p45 hypothetical protein phrog_4326 unknown function unknown function -1 30786 30980
YP_009004531.1 NC_023553_p82 hypothetical protein phrog_1875 unknown function unknown function -1 46664 46897
YP_009004516.1 NC_023553_p67 hypothetical protein phrog_5101 unknown function unknown function -1 40847 41146
YP_009004541.1 NC_023553_p92 hypothetical protein phrog_586 unknown function unknown function -1 49175 49528
YP_009004452.1 NC_023553_p3 hypothetical protein phrog_5234 unknown function unknown function 1 1543 2358
YP_009004504.1 NC_023553_p55 hypothetical protein phrog_2436 unknown function unknown function -1 36209 36361
YP_009004530.1 NC_023553_p81 hypothetical protein phrog_1178 unknown function unknown function -1 46254 46667
YP_009004511.1 NC_023553_p62 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38812 39285
YP_009004529.1 NC_023553_p80 hypothetical protein singleton unknown function unknown function -1 46075 46257
YP_009004487.1 NC_023553_p38 hypothetical protein singleton unknown function unknown function -1 27496 27558
YP_009004534.1 NC_023553_p85 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47255 47560
YP_009004496.1 NC_023553_p47 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31165 31587
YP_009004473.1 NC_023553_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15899 16731