Genomic map of Achromobacter phage JWAlpha (NC_023556)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023556
Definition
Achromobacter phage JWAlpha, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Jwalphavirus.
DB of origin
REFSEQ
Length
72329
Host Name
Achromobacter xylosoxidans
Host domain
Bacteria
Is prophage?
undef
Number of proteins
91
%GC
54.41
Number of singletons
5
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009004758.1 NC_023556_p57 hypothetical protein phrog_5974 unknown function unknown function 1 31406 31828
YP_009004735.1 NC_023556_p34 hypothetical protein phrog_19202 unknown function unknown function 1 15149 15340
YP_009004730.1 NC_023556_p29 hypothetical protein phrog_22234 unknown function unknown function 1 13031 13294
YP_009004749.1 NC_023556_p48 hypothetical protein phrog_26767 unknown function unknown function 1 20439 20909
YP_009004708.1 NC_023556_p7 hypothetical protein phrog_24239 unknown function unknown function 1 2153 2422
YP_009004704.1 NC_023556_p3 hypothetical protein phrog_36040 unknown function unknown function 1 1181 1348
YP_009004731.1 NC_023556_p30 hypothetical protein singleton unknown function unknown function 1 13276 13707
YP_009004740.1 NC_023556_p39 hypothetical protein phrog_19749 unknown function unknown function 1 17495 17734
YP_009004775.1 NC_023556_p74 hypothetical protein phrog_1357 major head protein head and packaging -1 56767 57990
YP_009004736.1 NC_023556_p35 hypothetical protein phrog_13631 unknown function unknown function 1 15354 15722
YP_009004789.1 NC_023556_p88 hypothetical protein phrog_30381 unknown function unknown function 1 70505 70828
YP_009004742.1 NC_023556_p41 hypothetical protein singleton unknown function unknown function 1 17972 18061
YP_009004783.1 NC_023556_p82 hypothetical protein phrog_36697 unknown function unknown function -1 63836 66289
YP_009004723.1 NC_023556_p22 hypothetical protein phrog_24167 unknown function unknown function 1 9129 9899
YP_009004713.1 NC_023556_p12 hypothetical protein phrog_2072 unknown function unknown function 1 3373 3762
YP_009004760.1 NC_023556_p59 hypothetical protein phrog_2139 exonuclease DNA, RNA and nucleotide metabolism 1 32356 33348
YP_009004715.1 NC_023556_p14 hypothetical protein phrog_2166 N4-like RNA polymerase DNA, RNA and nucleotide metabolism 1 4005 4835
YP_009004761.1 NC_023556_p60 DNA primase phrog_2135 DNA primase DNA, RNA and nucleotide metabolism 1 33345 35489
YP_009004782.1 NC_023556_p81 hypothetical protein phrog_5211 unknown function unknown function -1 63374 63712
YP_009004772.1 NC_023556_p71 hypothetical protein phrog_2220 unknown function unknown function -1 52344 55016
YP_009004754.1 NC_023556_p53 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 26387 26845
YP_009004773.1 NC_023556_p72 hypothetical protein phrog_2050 virion structural protein head and packaging -1 55020 55919
YP_009004734.1 NC_023556_p33 hypothetical protein phrog_1297 ATPase other 1 14108 15145
YP_009004770.1 NC_023556_p69 hypothetical protein phrog_6126 virion structural protein head and packaging -1 49747 51798
YP_009004779.1 NC_023556_p78 hypothetical protein phrog_6197 Rz-like spanin lysis -1 62038 62553
YP_009004728.1 NC_023556_p27 hypothetical protein phrog_17762 unknown function unknown function 1 12376 12723
YP_009004790.1 NC_023556_p89 hypothetical protein phrog_23882 unknown function unknown function 1 70825 71142
YP_009004786.1 NC_023556_p85 hypothetical protein phrog_2109 unknown function unknown function -1 68609 69289
YP_009004718.1 NC_023556_p17 hypothetical protein phrog_2051 RNA polymerase DNA, RNA and nucleotide metabolism 1 6080 6889
YP_009004741.1 NC_023556_p40 hypothetical protein phrog_27287 unknown function unknown function 1 17797 17955
YP_009004702.1 NC_023556_p1 hypothetical protein phrog_5020 unknown function unknown function 1 116 436
YP_009004746.1 NC_023556_p45 hypothetical protein phrog_25795 unknown function unknown function 1 19458 20036
YP_009004722.1 NC_023556_p21 hypothetical protein phrog_31180 unknown function unknown function 1 8901 9113
YP_009004712.1 NC_023556_p11 hypothetical protein phrog_36682 unknown function unknown function 1 3263 3376
YP_009004748.1 NC_023556_p47 hypothetical protein phrog_38162 unknown function unknown function 1 20224 20439
YP_009004781.1 NC_023556_p80 hypothetical protein phrog_1356 holin lysis -1 63126 63395
YP_009004751.1 NC_023556_p50 hypothetical protein phrog_2979 RIIA lysis inhibitor lysis 1 21881 24418
YP_009004710.1 NC_023556_p9 hypothetical protein phrog_5005 unknown function unknown function 1 2740 2952
YP_009004727.1 NC_023556_p26 hypothetical protein phrog_17232 unknown function unknown function 1 12014 12373
YP_009004785.1 NC_023556_p84 hypothetical protein phrog_38 terminase large subunit head and packaging -1 67006 68616
YP_009004787.1 NC_023556_p86 hypothetical protein phrog_3934 unknown function unknown function -1 69332 69799
YP_009004720.1 NC_023556_p19 hypothetical protein phrog_34947 unknown function unknown function 1 7316 7804
YP_009004726.1 NC_023556_p25 hypothetical protein phrog_20531 unknown function unknown function 1 11035 11949
YP_009004719.1 NC_023556_p18 hypothetical protein singleton unknown function unknown function 1 6964 7260
YP_009004788.1 NC_023556_p87 hypothetical protein phrog_7213 unknown function unknown function 1 69940 70251
YP_009004792.1 NC_023556_p91 hypothetical protein phrog_29119 unknown function unknown function 1 71521 71838
YP_009004711.1 NC_023556_p10 hypothetical protein phrog_464 unknown function unknown function 1 2956 3273
YP_009004732.1 NC_023556_p31 hypothetical protein phrog_34899 unknown function unknown function 1 13704 13889
YP_009004769.1 NC_023556_p68 virion RNA polymerase phrog_2206 virion RNA polymerase DNA, RNA and nucleotide metabolism -1 39371 49648
YP_009004791.1 NC_023556_p90 hypothetical protein phrog_31930 unknown function unknown function 1 71111 71524
YP_009004706.1 NC_023556_p5 hypothetical protein phrog_28690 unknown function unknown function 1 1527 1787
YP_009004755.1 NC_023556_p54 DNA helicase phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 26901 28205
YP_009004762.1 NC_023556_p61 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 35537 36310
YP_009004716.1 NC_023556_p15 hypothetical protein phrog_20599 RNA polymerase DNA, RNA and nucleotide metabolism 1 4870 5283
YP_009004763.1 NC_023556_p62 single-stranded DNA-binding protein phrog_743 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 36342 37103
YP_009004744.1 NC_023556_p43 hypothetical protein singleton unknown function unknown function -1 18547 18888
YP_009004709.1 NC_023556_p8 hypothetical protein phrog_2510 unknown function unknown function 1 2409 2738
YP_009004703.1 NC_023556_p2 hypothetical protein phrog_4099 unknown function unknown function 1 613 1038
YP_009004729.1 NC_023556_p28 hypothetical protein phrog_24427 unknown function unknown function 1 12729 13034
YP_009004738.1 NC_023556_p37 hypothetical protein singleton unknown function unknown function 1 16852 16998
YP_009004725.1 NC_023556_p24 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 10242 10940
YP_009004777.1 NC_023556_p76 hypothetical protein phrog_2346 unknown function unknown function -1 59360 59731
YP_009004767.1 NC_023556_p66 hypothetical protein phrog_18842 unknown function unknown function 1 38711 39136
YP_009004737.1 NC_023556_p36 hypothetical protein phrog_1314 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15695 16855
YP_009004768.1 NC_023556_p67 hypothetical protein phrog_19025 unknown function unknown function 1 39153 39335
YP_009004757.1 NC_023556_p56 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 28749 31409
YP_009004756.1 NC_023556_p55 hypothetical protein phrog_4881 unknown function unknown function 1 28216 28740
YP_009004724.1 NC_023556_p23 hypothetical protein phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 9901 10245
YP_009004714.1 NC_023556_p13 hypothetical protein phrog_35866 unknown function unknown function 1 3762 3989
YP_009004721.1 NC_023556_p20 hypothetical protein phrog_215 structural protein with Ig domain head and packaging 1 7829 8821
YP_009004733.1 NC_023556_p32 hypothetical protein phrog_21163 unknown function unknown function 1 13889 14092
YP_009004705.1 NC_023556_p4 hypothetical protein phrog_37143 unknown function unknown function 1 1375 1527
YP_009004707.1 NC_023556_p6 hypothetical protein phrog_24111 unknown function unknown function 1 1809 2153
YP_009004774.1 NC_023556_p73 hypothetical protein phrog_2130 unknown function unknown function -1 55998 56696
YP_009004745.1 NC_023556_p44 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 19124 19447
YP_009004753.1 NC_023556_p52 hypothetical protein phrog_6377 unknown function unknown function 1 26068 26595
YP_009004778.1 NC_023556_p77 portal protein phrog_1216 portal protein head and packaging -1 59742 62030
YP_009004743.1 NC_023556_p42 hypothetical protein phrog_30184 unknown function unknown function 1 18163 18345
YP_009004780.1 NC_023556_p79 N-acetylmuramidase phrog_315 endolysin lysis -1 62531 63163
YP_009004766.1 NC_023556_p65 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38202 38693
YP_009004771.1 NC_023556_p70 hypothetical protein phrog_16623 unknown function unknown function -1 51810 52334
YP_009004717.1 NC_023556_p16 hypothetical protein phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 5382 5942
YP_009004747.1 NC_023556_p46 hypothetical protein phrog_23639 unknown function unknown function 1 20036 20224
YP_009004750.1 NC_023556_p49 thymidilate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 20906 21817
YP_009004759.1 NC_023556_p58 hypothetical protein phrog_9919 unknown function unknown function 1 31831 32307
YP_009004776.1 NC_023556_p75 tape measure protein phrog_2120 tail length tape measure protein tail -1 58003 59334
YP_009004765.1 NC_023556_p64 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37631 38191
YP_009004764.1 NC_023556_p63 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 37107 37634
YP_009004784.1 NC_023556_p83 hypothetical protein phrog_2125 virion structural protein head and packaging -1 66293 66997
YP_009004739.1 NC_023556_p38 dCTP deaminase phrog_1663 dCTP deaminase DNA, RNA and nucleotide metabolism 1 17001 17495
YP_009004752.1 NC_023556_p51 hypothetical protein phrog_2886 RIIB lysis inhibitor lysis 1 24428 26032