| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023559 |
Definition |
Oenococcus phage phi9805, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
46145 |
Host Name |
Oenococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
38.86 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009005172.1 | NC_023559_p17 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 9965 | 11170 |
| YP_009005186.1 | NC_023559_p31 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 20285 | 20644 |
| YP_009005203.1 | NC_023559_p48 | hypothetical protein | phrog_585 | unknown function | unknown function | -1 | 39624 | 40034 |
| YP_009005200.1 | NC_023559_p45 | ABC transporter, ATP-binding protein-related protein | phrog_25246 | ABC transporter | moron, auxiliary metabolic gene and host takeover | 1 | 36407 | 38287 |
| YP_009005204.1 | NC_023559_p49 | hypothetical protein | phrog_26225 | unknown function | unknown function | 1 | 40235 | 41554 |
| YP_009005177.1 | NC_023559_p22 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 12725 | 13486 |
| YP_009005181.1 | NC_023559_p26 | minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 16518 | 17696 |
| YP_009005164.1 | NC_023559_p9 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4336 | 5058 |
| YP_009005178.1 | NC_023559_p23 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 13476 | 14771 |
| YP_009005199.1 | NC_023559_p44 | Hol44 | phrog_19617 | holin | lysis | 1 | 35940 | 36305 |
| YP_009005179.1 | NC_023559_p24 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 14790 | 16262 |
| YP_009005160.1 | NC_023559_p5 | hypothetical protein | phrog_13553 | unknown function | unknown function | 1 | 2532 | 2720 |
| YP_009005205.1 | NC_023559_p50 | bactoprenol glucosyl transferase | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 41573 | 42523 |
| YP_009005167.1 | NC_023559_p12 | hypothetical protein | phrog_15154 | unknown function | unknown function | 1 | 6561 | 6722 |
| YP_009005183.1 | NC_023559_p28 | hypothetical protein | phrog_909 | major head protein | head and packaging | 1 | 18537 | 18893 |
| YP_009005188.1 | NC_023559_p33 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 21203 | 21556 |
| YP_009005202.1 | NC_023559_p47 | hypothetical protein | phrog_22307 | unknown function | unknown function | -1 | 38624 | 39433 |
| YP_009005194.1 | NC_023559_p39 | hypothetical protein | phrog_22212 | unknown function | unknown function | 1 | 27895 | 33456 |
| YP_009005158.1 | NC_023559_p3 | transcriptional regulator, Cro/CI family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1684 | 1995 |
| YP_009005163.1 | NC_023559_p8 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 3413 | 4339 |
| YP_009005184.1 | NC_023559_p29 | hypothetical protein | phrog_29 | major head protein | head and packaging | 1 | 18924 | 19964 |
| YP_009005210.1 | NC_023559_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45529 | 45729 |
| YP_009005191.1 | NC_023559_p36 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 22576 | 22839 |
| YP_009005185.1 | NC_023559_p30 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 19983 | 20288 |
| YP_009005201.1 | NC_023559_p46 | hypothetical protein | phrog_20939 | unknown function | unknown function | 1 | 38330 | 38572 |
| YP_009005176.1 | NC_023559_p21 | hypothetical protein | phrog_21290 | unknown function | unknown function | 1 | 12217 | 12687 |
| YP_009005193.1 | NC_023559_p38 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 27508 | 27873 |
| YP_009005168.1 | NC_023559_p13 | hypothetical protein | phrog_11894 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6719 | 7087 |
| YP_009005180.1 | NC_023559_p25 | hypothetical protein | phrog_4478 | peptidase | other | 1 | 16222 | 16515 |
| YP_009005208.1 | NC_023559_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44521 | 45135 |
| YP_009005189.1 | NC_023559_p34 | major tail protein | phrog_158 | major tail protein | tail | 1 | 21559 | 22023 |
| YP_009005170.1 | NC_023559_p15 | transporter | phrog_5836 | unknown function | unknown function | 1 | 7667 | 9001 |
| YP_009005175.1 | NC_023559_p20 | hypothetical protein | phrog_2277 | unknown function | unknown function | -1 | 11855 | 12061 |
| YP_009005182.1 | NC_023559_p27 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 17860 | 18519 |
| YP_009005206.1 | NC_023559_p51 | hypothetical protein | phrog_6148 | beta-lactamase-inhibitor protein BLIP | moron, auxiliary metabolic gene and host takeover | 1 | 42792 | 43256 |
| YP_009005209.1 | NC_023559_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45256 | 45384 |
| YP_009005166.1 | NC_023559_p11 | replication initiation | phrog_1163 | unknown function | unknown function | 1 | 5632 | 6564 |
| YP_009005174.1 | NC_023559_p19 | hypothetical protein | phrog_20346 | unknown function | unknown function | 1 | 11628 | 11858 |
| YP_009005173.1 | NC_023559_p18 | hypothetical protein | phrog_22525 | unknown function | unknown function | 1 | 11277 | 11555 |
| YP_009005162.1 | NC_023559_p7 | hypothetical protein | phrog_23368 | unknown function | unknown function | 1 | 2999 | 3394 |
| YP_009005171.1 | NC_023559_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9068 | 9517 |
| YP_009005157.1 | NC_023559_p2 | hypothetical protein | phrog_13670 | unknown function | unknown function | -1 | 1392 | 1679 |
| YP_009005156.1 | NC_023559_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 231 | 1274 |
| YP_009005207.1 | NC_023559_p52 | hypothetical protein | phrog_26308 | unknown function | unknown function | 1 | 43274 | 44293 |
| YP_009005169.1 | NC_023559_p14 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 7084 | 7572 |
| YP_009005190.1 | NC_023559_p35 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 22085 | 22486 |
| YP_009005192.1 | NC_023559_p37 | tail length tape-measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 22875 | 27491 |
| YP_009005197.1 | NC_023559_p42 | hypothetical protein | phrog_23900 | unknown function | unknown function | 1 | 34182 | 34556 |
| YP_009005196.1 | NC_023559_p41 | hypothetical protein | phrog_13237 | unknown function | unknown function | 1 | 33763 | 34182 |
| YP_009005195.1 | NC_023559_p40 | hypothetical protein | phrog_17369 | unknown function | unknown function | 1 | 33477 | 33785 |
| YP_009005159.1 | NC_023559_p4 | hypothetical protein | phrog_17849 | unknown function | unknown function | 1 | 2245 | 2490 |
| YP_009005165.1 | NC_023559_p10 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5048 | 5620 |
| YP_009005187.1 | NC_023559_p32 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20637 | 21188 |
| YP_009005161.1 | NC_023559_p6 | hypothetical protein | phrog_19177 | unknown function | unknown function | 1 | 2860 | 3021 |
| YP_009005198.1 | NC_023559_p43 | lysin | phrog_291 | endolysin | lysis | 1 | 34637 | 35929 |