| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023566 |
Definition |
Rhizobium phage vB_RglS_P106B, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rigallicvirus; Rhizobium virus P106B. |
DB of origin |
REFSEQ |
Length |
56024 |
Host Name |
Rhizobium gallicum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
47.92 |
Number of singletons |
55 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009005991.1 | NC_023566_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42994 | 43227 |
| YP_009005953.1 | NC_023566_p27 | hypothetical protein | phrog_179 | tail terminator | connector | 1 | 17394 | 17819 |
| YP_009005959.1 | NC_023566_p33 | minor tail protein | phrog_14 | minor tail protein | tail | 1 | 21784 | 22149 |
| YP_009005942.1 | NC_023566_p16 | hypothetical protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 11085 | 11603 |
| YP_009005952.1 | NC_023566_p26 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 16990 | 17394 |
| YP_009005987.1 | NC_023566_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42139 | 42363 |
| YP_009005988.1 | NC_023566_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42421 | 42627 |
| YP_009005948.1 | NC_023566_p22 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 14189 | 15367 |
| YP_009005930.1 | NC_023566_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4330 | 4536 |
| YP_009005928.1 | NC_023566_p2 | structural protein | phrog_145 | portal protein | head and packaging | 1 | 1750 | 3411 |
| YP_009005937.1 | NC_023566_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6968 | 7225 |
| YP_009005970.1 | NC_023566_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31462 | 31782 |
| YP_009005927.1 | NC_023566_p1 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1 | 1737 |
| YP_009005935.1 | NC_023566_p9 | coat protein | phrog_283 | major head protein | head and packaging | 1 | 5095 | 6312 |
| YP_009005962.1 | NC_023566_p36 | tail protein | phrog_32 | tail assembly protein | tail | 1 | 23589 | 24179 |
| YP_009005946.1 | NC_023566_p20 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | -1 | 13657 | 13965 |
| YP_009005998.1 | NC_023566_p72 | hypothetical protein | phrog_27218 | unknown function | unknown function | -1 | 47558 | 48133 |
| YP_009005963.1 | NC_023566_p37 | tail component | phrog_31 | central tail fiber J | tail | 1 | 24552 | 28070 |
| YP_009006019.1 | NC_023566_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54783 | 55346 |
| YP_009005969.1 | NC_023566_p43 | hypothetical protein | phrog_20399 | unknown function | unknown function | -1 | 31154 | 31315 |
| YP_009006021.1 | NC_023566_p95 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55723 | 55968 |
| YP_009005966.1 | NC_023566_p40 | lysozyme | phrog_7 | endolysin | lysis | 1 | 29745 | 30728 |
| YP_009005947.1 | NC_023566_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13984 | 14208 |
| YP_009005934.1 | NC_023566_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4986 | 5102 |
| YP_009005977.1 | NC_023566_p51 | hypothetical protein | phrog_7011 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 35536 | 36474 |
| YP_009005983.1 | NC_023566_p57 | hypothetical protein | phrog_5845 | unknown function | unknown function | 1 | 39371 | 39781 |
| YP_009005940.1 | NC_023566_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 9027 | 10661 |
| YP_009005938.1 | NC_023566_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7232 | 7795 |
| YP_009006020.1 | NC_023566_p94 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55351 | 55716 |
| YP_009005997.1 | NC_023566_p71 | DNA Primase | singleton | unknown function | unknown function | 1 | 45089 | 47428 |
| YP_009005951.1 | NC_023566_p25 | hypothetical protein | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 15782 | 16903 |
| YP_009005992.1 | NC_023566_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43291 | 43563 |
| YP_009005954.1 | NC_023566_p28 | hypothetical protein | phrog_158 | major tail protein | tail | 1 | 17836 | 18627 |
| YP_009005931.1 | NC_023566_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4533 | 4724 |
| YP_009005968.1 | NC_023566_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30957 | 31124 |
| YP_009005956.1 | NC_023566_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19349 | 19480 |
| YP_009005967.1 | NC_023566_p41 | hypothetical protein | phrog_12535 | unknown function | unknown function | 1 | 30725 | 30991 |
| YP_009006006.1 | NC_023566_p80 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51059 | 51451 |
| YP_009006002.1 | NC_023566_p76 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49468 | 49677 |
| YP_009005979.1 | NC_023566_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37659 | 37952 |
| YP_009006010.1 | NC_023566_p84 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52233 | 52439 |
| YP_009005975.1 | NC_023566_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34556 | 34723 |
| YP_009005994.1 | NC_023566_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44321 | 44545 |
| YP_009006009.1 | NC_023566_p83 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52108 | 52236 |
| YP_009005996.1 | NC_023566_p70 | transcriptional regulator | singleton | excisionase and transcriptional regulator | integration and excision | 1 | 44859 | 45092 |
| YP_009005978.1 | NC_023566_p52 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 36579 | 37652 |
| YP_009006003.1 | NC_023566_p77 | tail assembly-like protein | phrog_2613 | unknown function | unknown function | -1 | 49719 | 50267 |
| YP_009005943.1 | NC_023566_p17 | hypothetical protein | singleton | unknown function | unknown function | -1 | 11670 | 12161 |
| YP_009006001.1 | NC_023566_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 49081 | 49293 |
| YP_009005932.1 | NC_023566_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4721 | 4846 |
| YP_009005958.1 | NC_023566_p32 | tail length tape measure protein precursor | phrog_1716 | tail length tape measure protein | tail | 1 | 20617 | 21780 |
| YP_009006000.1 | NC_023566_p74 | hypothetical protein | singleton | unknown function | unknown function | -1 | 48673 | 48909 |
| YP_009005972.1 | NC_023566_p46 | hypothetical protein | phrog_2320 | unknown function | unknown function | -1 | 31915 | 32286 |
| YP_009005961.1 | NC_023566_p35 | tail assembly protein | phrog_30 | minor tail protein | tail | 1 | 22862 | 23611 |
| YP_009005929.1 | NC_023566_p3 | hypothetical protein | phrog_784 | unknown function | unknown function | 1 | 3449 | 4258 |
| YP_009005981.1 | NC_023566_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38501 | 39142 |
| YP_009005986.1 | NC_023566_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41855 | 42142 |
| YP_009006014.1 | NC_023566_p88 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53717 | 53938 |
| YP_009005999.1 | NC_023566_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48187 | 48531 |
| YP_009005965.1 | NC_023566_p39 | tail fiber assembly-like protein | phrog_6034 | unknown function | unknown function | 1 | 29236 | 29748 |
| YP_009005980.1 | NC_023566_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37949 | 38395 |
| YP_009005989.1 | NC_023566_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42624 | 42815 |
| YP_009005960.1 | NC_023566_p34 | minor tail protein | phrog_18 | minor tail protein | tail | 1 | 22146 | 22862 |
| YP_009005985.1 | NC_023566_p59 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41469 | 41858 |
| YP_009005976.1 | NC_023566_p50 | exodeoxyribonuclease | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 34723 | 35418 |
| YP_009005950.1 | NC_023566_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15582 | 15785 |
| YP_009005933.1 | NC_023566_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4856 | 4975 |
| YP_009006017.1 | NC_023566_p91 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54392 | 54604 |
| YP_009005944.1 | NC_023566_p18 | hypothetical protein | phrog_161 | head closure Hc1 | connector | 1 | 12243 | 12605 |
| YP_009005982.1 | NC_023566_p56 | hypothetical protein | phrog_2855 | unknown function | unknown function | 1 | 39139 | 39369 |
| YP_009005939.1 | NC_023566_p13 | lysophospholipase L1-like esterase | phrog_8480 | lysophospholipase L1-like esterase | other | 1 | 7797 | 9014 |
| YP_009006004.1 | NC_023566_p78 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50264 | 50464 |
| YP_009005990.1 | NC_023566_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42812 | 42997 |
| YP_009005936.1 | NC_023566_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6415 | 6966 |
| YP_009006012.1 | NC_023566_p86 | hypothetical protein | phrog_3848 | unknown function | unknown function | -1 | 53149 | 53424 |
| YP_009005993.1 | NC_023566_p67 | nucleoside triphosphate pyrophosphohydrolase | phrog_229 | MazG-like pyrophosphatase | other | -1 | 43584 | 44324 |
| YP_009005973.1 | NC_023566_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32289 | 32486 |
| YP_009005941.1 | NC_023566_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10685 | 11008 |
| YP_009005964.1 | NC_023566_p38 | tail collar domain-containing protein | phrog_523 | tail collar fiber protein | tail | 1 | 28067 | 29224 |
| YP_009005971.1 | NC_023566_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31802 | 31918 |
| YP_009005957.1 | NC_023566_p31 | tail protein | singleton | unknown function | unknown function | 1 | 19502 | 20353 |
| YP_009005995.1 | NC_023566_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44511 | 44771 |
| YP_009006013.1 | NC_023566_p87 | hypothetical protein | phrog_33971 | unknown function | unknown function | -1 | 53421 | 53720 |
| YP_009006018.1 | NC_023566_p92 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54636 | 54758 |
| YP_009005955.1 | NC_023566_p29 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 18714 | 19112 |
| YP_009006005.1 | NC_023566_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50625 | 51011 |
| YP_009005984.1 | NC_023566_p58 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 39781 | 41472 |
| YP_009006011.1 | NC_023566_p85 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52405 | 52746 |
| YP_009006008.1 | NC_023566_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51945 | 52103 |
| YP_009005945.1 | NC_023566_p19 | head morphogenesis protein | phrog_3517 | head morphogenesis | head and packaging | 1 | 12608 | 13660 |
| YP_009006007.1 | NC_023566_p81 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51469 | 51945 |
| YP_009005974.1 | NC_023566_p48 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 32500 | 34551 |
| YP_009005949.1 | NC_023566_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15364 | 15585 |
| YP_009006016.1 | NC_023566_p90 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54114 | 54377 |
| YP_009006015.1 | NC_023566_p89 | hypothetical protein | singleton | unknown function | unknown function | -1 | 53943 | 54113 |