Genomic map of Rhizobium phage vB_RglS_P106B (NC_023566)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023566
Definition
Rhizobium phage vB_RglS_P106B, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Rigallicvirus; Rhizobium virus P106B.
DB of origin
REFSEQ
Length
56024
Host Name
Rhizobium gallicum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
47.92
Number of singletons
55
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009005991.1 NC_023566_p65 hypothetical protein singleton unknown function unknown function -1 42994 43227
YP_009005953.1 NC_023566_p27 hypothetical protein phrog_179 tail terminator connector 1 17394 17819
YP_009005959.1 NC_023566_p33 minor tail protein phrog_14 minor tail protein tail 1 21784 22149
YP_009005942.1 NC_023566_p16 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 11085 11603
YP_009005952.1 NC_023566_p26 hypothetical protein phrog_169 tail completion or Neck1 protein connector 1 16990 17394
YP_009005987.1 NC_023566_p61 hypothetical protein singleton unknown function unknown function -1 42139 42363
YP_009005988.1 NC_023566_p62 hypothetical protein singleton unknown function unknown function -1 42421 42627
YP_009005948.1 NC_023566_p22 hypothetical protein phrog_1909 unknown function unknown function -1 14189 15367
YP_009005930.1 NC_023566_p4 hypothetical protein singleton unknown function unknown function -1 4330 4536
YP_009005928.1 NC_023566_p2 structural protein phrog_145 portal protein head and packaging 1 1750 3411
YP_009005937.1 NC_023566_p11 hypothetical protein singleton unknown function unknown function 1 6968 7225
YP_009005970.1 NC_023566_p44 hypothetical protein singleton unknown function unknown function 1 31462 31782
YP_009005927.1 NC_023566_p1 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1 1737
YP_009005935.1 NC_023566_p9 coat protein phrog_283 major head protein head and packaging 1 5095 6312
YP_009005962.1 NC_023566_p36 tail protein phrog_32 tail assembly protein tail 1 23589 24179
YP_009005946.1 NC_023566_p20 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 13657 13965
YP_009005998.1 NC_023566_p72 hypothetical protein phrog_27218 unknown function unknown function -1 47558 48133
YP_009005963.1 NC_023566_p37 tail component phrog_31 central tail fiber J tail 1 24552 28070
YP_009006019.1 NC_023566_p93 hypothetical protein singleton unknown function unknown function 1 54783 55346
YP_009005969.1 NC_023566_p43 hypothetical protein phrog_20399 unknown function unknown function -1 31154 31315
YP_009006021.1 NC_023566_p95 hypothetical protein singleton unknown function unknown function -1 55723 55968
YP_009005966.1 NC_023566_p40 lysozyme phrog_7 endolysin lysis 1 29745 30728
YP_009005947.1 NC_023566_p21 hypothetical protein singleton unknown function unknown function -1 13984 14208
YP_009005934.1 NC_023566_p8 hypothetical protein singleton unknown function unknown function 1 4986 5102
YP_009005977.1 NC_023566_p51 hypothetical protein phrog_7011 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 35536 36474
YP_009005983.1 NC_023566_p57 hypothetical protein phrog_5845 unknown function unknown function 1 39371 39781
YP_009005940.1 NC_023566_p14 hypothetical protein singleton unknown function unknown function 1 9027 10661
YP_009005938.1 NC_023566_p12 hypothetical protein singleton unknown function unknown function 1 7232 7795
YP_009006020.1 NC_023566_p94 hypothetical protein singleton unknown function unknown function -1 55351 55716
YP_009005997.1 NC_023566_p71 DNA Primase singleton unknown function unknown function 1 45089 47428
YP_009005951.1 NC_023566_p25 hypothetical protein phrog_249 porphyrin biosynthesis moron, auxiliary metabolic gene and host takeover -1 15782 16903
YP_009005992.1 NC_023566_p66 hypothetical protein singleton unknown function unknown function -1 43291 43563
YP_009005954.1 NC_023566_p28 hypothetical protein phrog_158 major tail protein tail 1 17836 18627
YP_009005931.1 NC_023566_p5 hypothetical protein singleton unknown function unknown function -1 4533 4724
YP_009005968.1 NC_023566_p42 hypothetical protein singleton unknown function unknown function 1 30957 31124
YP_009005956.1 NC_023566_p30 hypothetical protein singleton unknown function unknown function 1 19349 19480
YP_009005967.1 NC_023566_p41 hypothetical protein phrog_12535 unknown function unknown function 1 30725 30991
YP_009006006.1 NC_023566_p80 hypothetical protein singleton unknown function unknown function -1 51059 51451
YP_009006002.1 NC_023566_p76 hypothetical protein singleton unknown function unknown function -1 49468 49677
YP_009005979.1 NC_023566_p53 hypothetical protein singleton unknown function unknown function -1 37659 37952
YP_009006010.1 NC_023566_p84 hypothetical protein singleton unknown function unknown function -1 52233 52439
YP_009005975.1 NC_023566_p49 hypothetical protein singleton unknown function unknown function -1 34556 34723
YP_009005994.1 NC_023566_p68 hypothetical protein singleton unknown function unknown function -1 44321 44545
YP_009006009.1 NC_023566_p83 hypothetical protein singleton unknown function unknown function -1 52108 52236
YP_009005996.1 NC_023566_p70 transcriptional regulator singleton excisionase and transcriptional regulator integration and excision 1 44859 45092
YP_009005978.1 NC_023566_p52 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 36579 37652
YP_009006003.1 NC_023566_p77 tail assembly-like protein phrog_2613 unknown function unknown function -1 49719 50267
YP_009005943.1 NC_023566_p17 hypothetical protein singleton unknown function unknown function -1 11670 12161
YP_009006001.1 NC_023566_p75 hypothetical protein singleton unknown function unknown function -1 49081 49293
YP_009005932.1 NC_023566_p6 hypothetical protein singleton unknown function unknown function -1 4721 4846
YP_009005958.1 NC_023566_p32 tail length tape measure protein precursor phrog_1716 tail length tape measure protein tail 1 20617 21780
YP_009006000.1 NC_023566_p74 hypothetical protein singleton unknown function unknown function -1 48673 48909
YP_009005972.1 NC_023566_p46 hypothetical protein phrog_2320 unknown function unknown function -1 31915 32286
YP_009005961.1 NC_023566_p35 tail assembly protein phrog_30 minor tail protein tail 1 22862 23611
YP_009005929.1 NC_023566_p3 hypothetical protein phrog_784 unknown function unknown function 1 3449 4258
YP_009005981.1 NC_023566_p55 hypothetical protein singleton unknown function unknown function 1 38501 39142
YP_009005986.1 NC_023566_p60 hypothetical protein singleton unknown function unknown function 1 41855 42142
YP_009006014.1 NC_023566_p88 hypothetical protein singleton unknown function unknown function -1 53717 53938
YP_009005999.1 NC_023566_p73 hypothetical protein singleton unknown function unknown function 1 48187 48531
YP_009005965.1 NC_023566_p39 tail fiber assembly-like protein phrog_6034 unknown function unknown function 1 29236 29748
YP_009005980.1 NC_023566_p54 hypothetical protein singleton unknown function unknown function -1 37949 38395
YP_009005989.1 NC_023566_p63 hypothetical protein singleton unknown function unknown function -1 42624 42815
YP_009005960.1 NC_023566_p34 minor tail protein phrog_18 minor tail protein tail 1 22146 22862
YP_009005985.1 NC_023566_p59 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 41469 41858
YP_009005976.1 NC_023566_p50 exodeoxyribonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 34723 35418
YP_009005950.1 NC_023566_p24 hypothetical protein singleton unknown function unknown function -1 15582 15785
YP_009005933.1 NC_023566_p7 hypothetical protein singleton unknown function unknown function 1 4856 4975
YP_009006017.1 NC_023566_p91 hypothetical protein singleton unknown function unknown function -1 54392 54604
YP_009005944.1 NC_023566_p18 hypothetical protein phrog_161 head closure Hc1 connector 1 12243 12605
YP_009005982.1 NC_023566_p56 hypothetical protein phrog_2855 unknown function unknown function 1 39139 39369
YP_009005939.1 NC_023566_p13 lysophospholipase L1-like esterase phrog_8480 lysophospholipase L1-like esterase other 1 7797 9014
YP_009006004.1 NC_023566_p78 hypothetical protein singleton unknown function unknown function -1 50264 50464
YP_009005990.1 NC_023566_p64 hypothetical protein singleton unknown function unknown function -1 42812 42997
YP_009005936.1 NC_023566_p10 hypothetical protein singleton unknown function unknown function 1 6415 6966
YP_009006012.1 NC_023566_p86 hypothetical protein phrog_3848 unknown function unknown function -1 53149 53424
YP_009005993.1 NC_023566_p67 nucleoside triphosphate pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 43584 44324
YP_009005973.1 NC_023566_p47 hypothetical protein singleton unknown function unknown function -1 32289 32486
YP_009005941.1 NC_023566_p15 hypothetical protein singleton unknown function unknown function 1 10685 11008
YP_009005964.1 NC_023566_p38 tail collar domain-containing protein phrog_523 tail collar fiber protein tail 1 28067 29224
YP_009005971.1 NC_023566_p45 hypothetical protein singleton unknown function unknown function -1 31802 31918
YP_009005957.1 NC_023566_p31 tail protein singleton unknown function unknown function 1 19502 20353
YP_009005995.1 NC_023566_p69 hypothetical protein singleton unknown function unknown function -1 44511 44771
YP_009006013.1 NC_023566_p87 hypothetical protein phrog_33971 unknown function unknown function -1 53421 53720
YP_009006018.1 NC_023566_p92 hypothetical protein singleton unknown function unknown function -1 54636 54758
YP_009005955.1 NC_023566_p29 hypothetical protein phrog_313 Tail assembly chaperone tail 1 18714 19112
YP_009006005.1 NC_023566_p79 hypothetical protein singleton unknown function unknown function -1 50625 51011
YP_009005984.1 NC_023566_p58 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 39781 41472
YP_009006011.1 NC_023566_p85 hypothetical protein singleton unknown function unknown function -1 52405 52746
YP_009006008.1 NC_023566_p82 hypothetical protein singleton unknown function unknown function -1 51945 52103
YP_009005945.1 NC_023566_p19 head morphogenesis protein phrog_3517 head morphogenesis head and packaging 1 12608 13660
YP_009006007.1 NC_023566_p81 hypothetical protein singleton unknown function unknown function -1 51469 51945
YP_009005974.1 NC_023566_p48 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 32500 34551
YP_009005949.1 NC_023566_p23 hypothetical protein singleton unknown function unknown function -1 15364 15585
YP_009006016.1 NC_023566_p90 hypothetical protein singleton unknown function unknown function -1 54114 54377
YP_009006015.1 NC_023566_p89 hypothetical protein singleton unknown function unknown function -1 53943 54113