| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023571 |
Definition |
Oenococcus phage phiS11, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
46243 |
Host Name |
Oenococcus oeni |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
59 |
%GC |
38.6 |
Number of singletons |
10 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009006579.1 | NC_023571_p37 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 21927 | 22328 |
| YP_009006594.1 | NC_023571_p52 | DNA-cytosine methyltransferase | phrog_116 | DNA methyltransferase | other | -1 | 39703 | 40896 |
| YP_009006570.1 | NC_023571_p28 | prophage minor head protein | phrog_115 | minor head protein | head and packaging | 1 | 16362 | 17540 |
| YP_009006567.1 | NC_023571_p25 | Phage terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 13319 | 14614 |
| YP_009006578.1 | NC_023571_p36 | major tail protein | phrog_158 | major tail protein | tail | 1 | 21401 | 21865 |
| YP_009006591.1 | NC_023571_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36864 | 37190 |
| YP_009006596.1 | NC_023571_p54 | hypothetical protein | phrog_585 | unknown function | unknown function | -1 | 41524 | 41934 |
| YP_009006547.1 | NC_023571_p5 | hypothetical protein | phrog_13553 | unknown function | unknown function | 1 | 2533 | 2721 |
| YP_009006577.1 | NC_023571_p35 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 21027 | 21398 |
| YP_009006544.1 | NC_023571_p2 | hypothetical protein | phrog_13670 | unknown function | unknown function | -1 | 1392 | 1679 |
| YP_009006595.1 | NC_023571_p53 | Very-short-patch mismatch repair endonuclease | singleton | unknown function | unknown function | 1 | 41067 | 41405 |
| YP_009006572.1 | NC_023571_p30 | prophage protein | phrog_909 | major head protein | head and packaging | 1 | 18379 | 18735 |
| YP_009006560.1 | NC_023571_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9562 | 9678 |
| YP_009006601.1 | NC_023571_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45659 | 45784 |
| YP_009006582.1 | NC_023571_p40 | hypothetical protein | phrog_1194 | unknown function | unknown function | 1 | 27350 | 27715 |
| YP_009006555.1 | NC_023571_p13 | hypothetical protein | phrog_11894 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6708 | 7076 |
| YP_009006569.1 | NC_023571_p27 | hypothetical protein | phrog_4478 | peptidase | other | 1 | 16066 | 16359 |
| YP_009006545.1 | NC_023571_p3 | Phage transcriptional regulatory, Cro/C1 family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1684 | 1995 |
| YP_009006562.1 | NC_023571_p20 | hypothetical protein | phrog_22525 | unknown function | unknown function | 1 | 11120 | 11398 |
| YP_009006549.1 | NC_023571_p7 | hypothetical protein | phrog_23368 | unknown function | unknown function | 1 | 3000 | 3395 |
| YP_009006584.1 | NC_023571_p42 | hypothetical protein | phrog_17369 | unknown function | unknown function | 1 | 32725 | 33033 |
| YP_009006593.1 | NC_023571_p51 | type II restriction endonuclease | singleton | unknown function | unknown function | -1 | 38402 | 39661 |
| YP_009006598.1 | NC_023571_p56 | Bactoprenol glucosyl transferase | phrog_841 | GtrB-like O-antigen conversion | moron, auxiliary metabolic gene and host takeover | 1 | 43493 | 44443 |
| YP_009006592.1 | NC_023571_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37510 | 38367 |
| YP_009006600.1 | NC_023571_p58 | hypothetical protein | phrog_26308 | unknown function | unknown function | 1 | 45227 | 45502 |
| YP_009006546.1 | NC_023571_p4 | hypothetical protein | phrog_17849 | unknown function | unknown function | 1 | 2246 | 2491 |
| YP_009006585.1 | NC_023571_p43 | hypothetical protein | phrog_13237 | unknown function | unknown function | 1 | 33011 | 33430 |
| YP_009006563.1 | NC_023571_p21 | hypothetical protein | phrog_20346 | unknown function | unknown function | 1 | 11471 | 11701 |
| YP_009006554.1 | NC_023571_p12 | hypothetical protein | phrog_15154 | unknown function | unknown function | 1 | 6550 | 6711 |
| YP_009006564.1 | NC_023571_p22 | hypothetical protein | phrog_2277 | unknown function | unknown function | -1 | 11698 | 11904 |
| YP_009006575.1 | NC_023571_p33 | hypothetical protein | phrog_2168 | unknown function | unknown function | 1 | 20127 | 20486 |
| YP_009006543.1 | NC_023571_p1 | Phage integrase | phrog_1 | integrase | integration and excision | -1 | 231 | 1274 |
| YP_009006556.1 | NC_023571_p14 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 7094 | 7573 |
| YP_009006587.1 | NC_023571_p45 | Phage lysin | phrog_291 | endolysin | lysis | 1 | 33887 | 35182 |
| YP_009006573.1 | NC_023571_p31 | prophage major head protein | phrog_29 | major head protein | head and packaging | 1 | 18767 | 19807 |
| YP_009006565.1 | NC_023571_p23 | prophage protein | phrog_21290 | unknown function | unknown function | 1 | 12060 | 12530 |
| YP_009006553.1 | NC_023571_p11 | Phage replication initiation | phrog_1163 | unknown function | unknown function | 1 | 5627 | 6553 |
| YP_009006597.1 | NC_023571_p55 | hypothetical protein | phrog_26225 | unknown function | unknown function | 1 | 42137 | 43474 |
| YP_009006566.1 | NC_023571_p24 | Phage terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 12568 | 13329 |
| YP_009006557.1 | NC_023571_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7685 | 7801 |
| YP_009006558.1 | NC_023571_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7941 | 8891 |
| YP_009006599.1 | NC_023571_p57 | hypothetical protein | phrog_6148 | beta-lactamase-inhibitor protein BLIP | moron, auxiliary metabolic gene and host takeover | 1 | 44748 | 45179 |
| YP_009006588.1 | NC_023571_p46 | Hol44 | phrog_19617 | holin | lysis | 1 | 35193 | 35549 |
| YP_009006550.1 | NC_023571_p8 | prophage protein | phrog_674 | unknown function | unknown function | 1 | 3414 | 4340 |
| YP_009006590.1 | NC_023571_p48 | hypothetical protein | phrog_20939 | unknown function | unknown function | 1 | 36568 | 36810 |
| YP_009006552.1 | NC_023571_p10 | prophage Lp2 protein 18 | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 5043 | 5615 |
| YP_009006589.1 | NC_023571_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35737 | 36513 |
| YP_009006586.1 | NC_023571_p44 | hypothetical protein | phrog_23900 | unknown function | unknown function | 1 | 33430 | 33804 |
| YP_009006568.1 | NC_023571_p26 | Phage portal | phrog_64 | portal protein | head and packaging | 1 | 14634 | 16106 |
| YP_009006561.1 | NC_023571_p19 | prophage protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | 1 | 10063 | 11013 |
| YP_009006571.1 | NC_023571_p29 | scaffold protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 17702 | 18361 |
| YP_009006580.1 | NC_023571_p38 | hypothetical protein | phrog_2066 | unknown function | unknown function | 1 | 22418 | 22681 |
| YP_009006574.1 | NC_023571_p32 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 19825 | 20130 |
| YP_009006551.1 | NC_023571_p9 | phage nucleotide-binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 4337 | 5053 |
| YP_009006581.1 | NC_023571_p39 | Phage tail length tape-measure protein | phrog_1535 | tail length tape measure protein | tail | 1 | 22717 | 27333 |
| YP_009006548.1 | NC_023571_p6 | hypothetical protein | phrog_19177 | unknown function | unknown function | 1 | 2861 | 3022 |
| YP_009006576.1 | NC_023571_p34 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20479 | 21030 |
| YP_009006583.1 | NC_023571_p41 | prophage protein | phrog_22212 | unknown function | unknown function | 1 | 27737 | 32704 |
| YP_009006559.1 | NC_023571_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 8932 | 9495 |