Genomic map of Oenococcus phage phiS11 (NC_023571)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023571
Definition
Oenococcus phage phiS11, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
46243
Host Name
Oenococcus oeni
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
38.6
Number of singletons
10
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009006579.1 NC_023571_p37 hypothetical protein phrog_183 tail chaperone protein tail 1 21927 22328
YP_009006594.1 NC_023571_p52 DNA-cytosine methyltransferase phrog_116 DNA methyltransferase other -1 39703 40896
YP_009006570.1 NC_023571_p28 prophage minor head protein phrog_115 minor head protein head and packaging 1 16362 17540
YP_009006567.1 NC_023571_p25 Phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 13319 14614
YP_009006578.1 NC_023571_p36 major tail protein phrog_158 major tail protein tail 1 21401 21865
YP_009006591.1 NC_023571_p49 hypothetical protein singleton unknown function unknown function -1 36864 37190
YP_009006596.1 NC_023571_p54 hypothetical protein phrog_585 unknown function unknown function -1 41524 41934
YP_009006547.1 NC_023571_p5 hypothetical protein phrog_13553 unknown function unknown function 1 2533 2721
YP_009006577.1 NC_023571_p35 hypothetical protein phrog_78 tail terminator connector 1 21027 21398
YP_009006544.1 NC_023571_p2 hypothetical protein phrog_13670 unknown function unknown function -1 1392 1679
YP_009006595.1 NC_023571_p53 Very-short-patch mismatch repair endonuclease singleton unknown function unknown function 1 41067 41405
YP_009006572.1 NC_023571_p30 prophage protein phrog_909 major head protein head and packaging 1 18379 18735
YP_009006560.1 NC_023571_p18 hypothetical protein singleton unknown function unknown function -1 9562 9678
YP_009006601.1 NC_023571_p59 hypothetical protein singleton unknown function unknown function 1 45659 45784
YP_009006582.1 NC_023571_p40 hypothetical protein phrog_1194 unknown function unknown function 1 27350 27715
YP_009006555.1 NC_023571_p13 hypothetical protein phrog_11894 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6708 7076
YP_009006569.1 NC_023571_p27 hypothetical protein phrog_4478 peptidase other 1 16066 16359
YP_009006545.1 NC_023571_p3 Phage transcriptional regulatory, Cro/C1 family phrog_8 transcriptional regulator transcription regulation -1 1684 1995
YP_009006562.1 NC_023571_p20 hypothetical protein phrog_22525 unknown function unknown function 1 11120 11398
YP_009006549.1 NC_023571_p7 hypothetical protein phrog_23368 unknown function unknown function 1 3000 3395
YP_009006584.1 NC_023571_p42 hypothetical protein phrog_17369 unknown function unknown function 1 32725 33033
YP_009006593.1 NC_023571_p51 type II restriction endonuclease singleton unknown function unknown function -1 38402 39661
YP_009006598.1 NC_023571_p56 Bactoprenol glucosyl transferase phrog_841 GtrB-like O-antigen conversion moron, auxiliary metabolic gene and host takeover 1 43493 44443
YP_009006592.1 NC_023571_p50 hypothetical protein singleton unknown function unknown function -1 37510 38367
YP_009006600.1 NC_023571_p58 hypothetical protein phrog_26308 unknown function unknown function 1 45227 45502
YP_009006546.1 NC_023571_p4 hypothetical protein phrog_17849 unknown function unknown function 1 2246 2491
YP_009006585.1 NC_023571_p43 hypothetical protein phrog_13237 unknown function unknown function 1 33011 33430
YP_009006563.1 NC_023571_p21 hypothetical protein phrog_20346 unknown function unknown function 1 11471 11701
YP_009006554.1 NC_023571_p12 hypothetical protein phrog_15154 unknown function unknown function 1 6550 6711
YP_009006564.1 NC_023571_p22 hypothetical protein phrog_2277 unknown function unknown function -1 11698 11904
YP_009006575.1 NC_023571_p33 hypothetical protein phrog_2168 unknown function unknown function 1 20127 20486
YP_009006543.1 NC_023571_p1 Phage integrase phrog_1 integrase integration and excision -1 231 1274
YP_009006556.1 NC_023571_p14 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 7094 7573
YP_009006587.1 NC_023571_p45 Phage lysin phrog_291 endolysin lysis 1 33887 35182
YP_009006573.1 NC_023571_p31 prophage major head protein phrog_29 major head protein head and packaging 1 18767 19807
YP_009006565.1 NC_023571_p23 prophage protein phrog_21290 unknown function unknown function 1 12060 12530
YP_009006553.1 NC_023571_p11 Phage replication initiation phrog_1163 unknown function unknown function 1 5627 6553
YP_009006597.1 NC_023571_p55 hypothetical protein phrog_26225 unknown function unknown function 1 42137 43474
YP_009006566.1 NC_023571_p24 Phage terminase small subunit phrog_51 terminase small subunit head and packaging 1 12568 13329
YP_009006557.1 NC_023571_p15 hypothetical protein singleton unknown function unknown function 1 7685 7801
YP_009006558.1 NC_023571_p16 hypothetical protein singleton unknown function unknown function 1 7941 8891
YP_009006599.1 NC_023571_p57 hypothetical protein phrog_6148 beta-lactamase-inhibitor protein BLIP moron, auxiliary metabolic gene and host takeover 1 44748 45179
YP_009006588.1 NC_023571_p46 Hol44 phrog_19617 holin lysis 1 35193 35549
YP_009006550.1 NC_023571_p8 prophage protein phrog_674 unknown function unknown function 1 3414 4340
YP_009006590.1 NC_023571_p48 hypothetical protein phrog_20939 unknown function unknown function 1 36568 36810
YP_009006552.1 NC_023571_p10 prophage Lp2 protein 18 phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 5043 5615
YP_009006589.1 NC_023571_p47 hypothetical protein singleton unknown function unknown function 1 35737 36513
YP_009006586.1 NC_023571_p44 hypothetical protein phrog_23900 unknown function unknown function 1 33430 33804
YP_009006568.1 NC_023571_p26 Phage portal phrog_64 portal protein head and packaging 1 14634 16106
YP_009006561.1 NC_023571_p19 prophage protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 10063 11013
YP_009006571.1 NC_023571_p29 scaffold protein phrog_172 head scaffolding protein head and packaging 1 17702 18361
YP_009006580.1 NC_023571_p38 hypothetical protein phrog_2066 unknown function unknown function 1 22418 22681
YP_009006574.1 NC_023571_p32 hypothetical protein phrog_132 head-tail adaptor connector 1 19825 20130
YP_009006551.1 NC_023571_p9 phage nucleotide-binding protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4337 5053
YP_009006581.1 NC_023571_p39 Phage tail length tape-measure protein phrog_1535 tail length tape measure protein tail 1 22717 27333
YP_009006548.1 NC_023571_p6 hypothetical protein phrog_19177 unknown function unknown function 1 2861 3022
YP_009006576.1 NC_023571_p34 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 20479 21030
YP_009006583.1 NC_023571_p41 prophage protein phrog_22212 unknown function unknown function 1 27737 32704
YP_009006559.1 NC_023571_p17 hypothetical protein singleton unknown function unknown function 1 8932 9495