| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023572 |
Definition |
Mycobacterium phage MichelleMyBell, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Buttersvirus. |
DB of origin |
REFSEQ |
Length |
42240 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
66.02 |
Number of singletons |
7 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009006643.1 | NC_023572_p42 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 29980 | 30246 |
| YP_009006610.1 | NC_023572_p9 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 6478 | 6819 |
| YP_009006663.1 | NC_023572_p62 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 37899 | 38789 |
| YP_009006666.1 | NC_023572_p65 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 39827 | 40492 |
| YP_009006656.1 | NC_023572_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35379 | 35531 |
| YP_009006662.1 | NC_023572_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37522 | 37899 |
| YP_009006628.1 | NC_023572_p27 | holin | phrog_526 | holin | lysis | 1 | 23327 | 23731 |
| YP_009006625.1 | NC_023572_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21291 | 21653 |
| YP_009006627.1 | NC_023572_p26 | lysin A | phrog_1519 | endolysin | lysis | 1 | 21831 | 23330 |
| YP_009006645.1 | NC_023572_p44 | hypothetical protein | phrog_8273 | unknown function | unknown function | 1 | 30404 | 30676 |
| YP_009006646.1 | NC_023572_p45 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 30673 | 31050 |
| YP_009006608.1 | NC_023572_p7 | hypothetical protein | phrog_7530 | unknown function | unknown function | 1 | 5758 | 5997 |
| YP_009006620.1 | NC_023572_p19 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16712 | 17554 |
| YP_009006651.1 | NC_023572_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33610 | 33981 |
| YP_009006622.1 | NC_023572_p21 | minor tail protein | phrog_2235 | minor tail protein | tail | 1 | 19775 | 20029 |
| YP_009006636.1 | NC_023572_p35 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 27732 | 28103 |
| YP_009006633.1 | NC_023572_p32 | hypothetical protein | phrog_16337 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 25810 | 26337 |
| YP_009006670.1 | NC_023572_p69 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 41523 | 41768 |
| YP_009006658.1 | NC_023572_p57 | hypothetical protein | phrog_1495 | unknown function | unknown function | 1 | 36034 | 36249 |
| YP_009006644.1 | NC_023572_p43 | hypothetical protein | phrog_29836 | unknown function | unknown function | 1 | 30243 | 30407 |
| YP_009006617.1 | NC_023572_p16 | tapemeasure | phrog_2337 | tail length tape measure protein | tail | 1 | 10163 | 13264 |
| YP_009006661.1 | NC_023572_p60 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 37388 | 37522 |
| YP_009006657.1 | NC_023572_p56 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 35592 | 36032 |
| YP_009006603.1 | NC_023572_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 512 | 2044 |
| YP_009006654.1 | NC_023572_p53 | hypothetical protein | phrog_29537 | unknown function | unknown function | 1 | 34860 | 35096 |
| YP_009006640.1 | NC_023572_p39 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 28891 | 29283 |
| YP_009006613.1 | NC_023572_p12 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7383 | 7802 |
| YP_009006619.1 | NC_023572_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14987 | 16696 |
| YP_009006652.1 | NC_023572_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33978 | 34409 |
| YP_009006641.1 | NC_023572_p40 | hypothetical protein | phrog_15628 | unknown function | unknown function | 1 | 29349 | 29660 |
| YP_009006653.1 | NC_023572_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34406 | 34873 |
| YP_009006650.1 | NC_023572_p49 | RusA | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 33179 | 33610 |
| YP_009006642.1 | NC_023572_p41 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29657 | 29980 |
| YP_009006624.1 | NC_023572_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21140 | 21304 |
| YP_009006655.1 | NC_023572_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35089 | 35382 |
| YP_009006668.1 | NC_023572_p67 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 40907 | 41131 |
| YP_009006615.1 | NC_023572_p14 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9075 | 9981 |
| YP_009006602.1 | NC_023572_p1 | hypothetical protein | phrog_6975 | unknown function | unknown function | 1 | 63 | 512 |
| YP_009006637.1 | NC_023572_p36 | Xis | phrog_4583 | transcriptional repressor | transcription regulation | 1 | 28237 | 28470 |
| YP_009006664.1 | NC_023572_p63 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 38786 | 39388 |
| YP_009006649.1 | NC_023572_p48 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32199 | 33182 |
| YP_009006621.1 | NC_023572_p20 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 17554 | 19770 |
| YP_009006605.1 | NC_023572_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2263 | 3549 |
| YP_009006660.1 | NC_023572_p59 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 37278 | 37388 |
| YP_009006616.1 | NC_023572_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9075 | 9605 |
| YP_009006638.1 | NC_023572_p37 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28467 | 28772 |
| YP_009006623.1 | NC_023572_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 20029 | 21114 |
| YP_009006607.1 | NC_023572_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4383 | 5675 |
| YP_009006606.1 | NC_023572_p5 | capsid maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 3549 | 4355 |
| YP_009006639.1 | NC_023572_p38 | hypothetical protein | phrog_10253 | unknown function | unknown function | 1 | 28769 | 28894 |
| YP_009006669.1 | NC_023572_p68 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 41071 | 41526 |
| YP_009006665.1 | NC_023572_p64 | hypothetical protein | phrog_15405 | unknown function | unknown function | 1 | 39375 | 39830 |
| YP_009006648.1 | NC_023572_p47 | RecE | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31300 | 32202 |
| YP_009006609.1 | NC_023572_p8 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 5990 | 6481 |
| YP_009006618.1 | NC_023572_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13266 | 14987 |
| YP_009006612.1 | NC_023572_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7015 | 7386 |
| YP_009006634.1 | NC_023572_p33 | hypothetical protein | phrog_1712 | unknown function | unknown function | -1 | 26380 | 26721 |
| YP_009006626.1 | NC_023572_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 21653 | 21820 |
| YP_009006604.1 | NC_023572_p3 | hypothetical protein | phrog_6750 | unknown function | unknown function | 1 | 2037 | 2249 |
| YP_009006671.1 | NC_023572_p70 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41746 | 42054 |
| YP_009006659.1 | NC_023572_p58 | hypothetical protein | phrog_2045 | unknown function | unknown function | 1 | 36242 | 37285 |
| YP_009006630.1 | NC_023572_p29 | hypothetical protein | phrog_3243 | unknown function | unknown function | 1 | 24382 | 25314 |
| YP_009006647.1 | NC_023572_p46 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31148 | 31303 |
| YP_009006635.1 | NC_023572_p34 | integrase | phrog_1 | integrase | integration and excision | -1 | 26755 | 27726 |
| YP_009006632.1 | NC_023572_p31 | hypothetical protein | phrog_16062 | unknown function | unknown function | -1 | 25499 | 25696 |
| YP_009006611.1 | NC_023572_p10 | hypothetical protein | phrog_8006 | neck protein | connector | 1 | 6831 | 7028 |
| YP_009006667.1 | NC_023572_p66 | hypothetical protein | phrog_27168 | unknown function | unknown function | 1 | 40638 | 40904 |
| YP_009006631.1 | NC_023572_p30 | hypothetical protein | phrog_12868 | unknown function | unknown function | 1 | 25337 | 25477 |
| YP_009006629.1 | NC_023572_p28 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 23728 | 24108 |
| YP_009006614.1 | NC_023572_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7917 | 8975 |