| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023580 |
Definition |
Mycobacterium phage Saal, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
REFSEQ |
Length |
57775 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
61.28 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009007483.1 | NC_023580_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14790 | 16499 |
| YP_009007470.1 | NC_023580_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2240 | 3598 |
| YP_009007499.1 | NC_023580_p32 | holin | phrog_443 | holin | lysis | 1 | 28586 | 28819 |
| YP_009007496.1 | NC_023580_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26070 | 26303 |
| YP_009007557.1 | NC_023580_p90 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 52344 | 53015 |
| YP_009007478.1 | NC_023580_p11 | major tail subunit | phrog_476 | major tail protein | tail | 1 | 7598 | 8407 |
| YP_009007527.1 | NC_023580_p60 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 40714 | 41199 |
| YP_009007513.1 | NC_023580_p46 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33764 | 34249 |
| YP_009007489.1 | NC_023580_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23341 | 23595 |
| YP_009007518.1 | NC_023580_p51 | hypothetical protein | phrog_4652 | unknown function | unknown function | 1 | 36823 | 37569 |
| YP_009007543.1 | NC_023580_p76 | hypothetical protein | phrog_11384 | unknown function | unknown function | 1 | 48749 | 49036 |
| YP_009007530.1 | NC_023580_p63 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 41839 | 41994 |
| YP_009007508.1 | NC_023580_p41 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31179 | 31346 |
| YP_009007536.1 | NC_023580_p69 | hypothetical protein | phrog_7443 | unknown function | unknown function | 1 | 46312 | 46533 |
| YP_009007568.1 | NC_023580_p101 | glycosyl transferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 56684 | 57307 |
| YP_009007535.1 | NC_023580_p68 | DNA helicase/methylase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 43796 | 46315 |
| YP_009007484.1 | NC_023580_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16541 | 17386 |
| YP_009007528.1 | NC_023580_p61 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 41196 | 41477 |
| YP_009007563.1 | NC_023580_p96 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 54209 | 54622 |
| YP_009007534.1 | NC_023580_p67 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43437 | 43799 |
| YP_009007515.1 | NC_023580_p48 | hypothetical protein | phrog_6267 | transcriptional repressor | transcription regulation | 1 | 35176 | 35469 |
| YP_009007539.1 | NC_023580_p72 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 46825 | 46974 |
| YP_009007474.1 | NC_023580_p7 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5866 | 6435 |
| YP_009007544.1 | NC_023580_p77 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 49033 | 49227 |
| YP_009007501.1 | NC_023580_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29215 | 29448 |
| YP_009007522.1 | NC_023580_p55 | hypothetical protein | phrog_3381 | unknown function | unknown function | 1 | 38551 | 38727 |
| YP_009007506.1 | NC_023580_p39 | hypothetical protein | phrog_7480 | unknown function | unknown function | -1 | 30854 | 31060 |
| YP_009007555.1 | NC_023580_p88 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 51708 | 51785 |
| YP_009007526.1 | NC_023580_p59 | WhiB | phrog_1333 | unknown function | unknown function | 1 | 40223 | 40717 |
| YP_009007523.1 | NC_023580_p56 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 38724 | 39521 |
| YP_009007559.1 | NC_023580_p92 | hypothetical protein | phrog_13974 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 53301 | 53603 |
| YP_009007505.1 | NC_023580_p38 | hypothetical protein | phrog_10622 | unknown function | unknown function | -1 | 30715 | 30861 |
| YP_009007512.1 | NC_023580_p45 | antitoxin in toxin/antitoxin system (RelB-like) | phrog_2268 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 33505 | 33753 |
| YP_009007487.1 | NC_023580_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21800 | 22963 |
| YP_009007473.1 | NC_023580_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5036 | 5857 |
| YP_009007551.1 | NC_023580_p84 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 50959 | 51096 |
| YP_009007546.1 | NC_023580_p79 | MPME1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 49849 | 50220 |
| YP_009007542.1 | NC_023580_p75 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 48487 | 48756 |
| YP_009007561.1 | NC_023580_p94 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 53731 | 54012 |
| YP_009007521.1 | NC_023580_p54 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 38405 | 38554 |
| YP_009007500.1 | NC_023580_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 28816 | 29190 |
| YP_009007498.1 | NC_023580_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27571 | 28572 |
| YP_009007538.1 | NC_023580_p71 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 46676 | 46828 |
| YP_009007560.1 | NC_023580_p93 | hypothetical protein | phrog_14508 | unknown function | unknown function | 1 | 53600 | 53722 |
| YP_009007531.1 | NC_023580_p64 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41994 | 42224 |
| YP_009007550.1 | NC_023580_p83 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50780 | 50959 |
| YP_009007532.1 | NC_023580_p65 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 42221 | 42562 |
| YP_009007492.1 | NC_023580_p25 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25074 | 25271 |
| YP_009007562.1 | NC_023580_p95 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 54012 | 54212 |
| YP_009007533.1 | NC_023580_p66 | AAA ATPase | phrog_1366 | unknown function | unknown function | 1 | 42559 | 43440 |
| YP_009007567.1 | NC_023580_p100 | glycosyl transferase | phrog_1693 | unknown function | unknown function | 1 | 56493 | 56687 |
| YP_009007475.1 | NC_023580_p8 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 6432 | 6761 |
| YP_009007486.1 | NC_023580_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19917 | 21803 |
| YP_009007477.1 | NC_023580_p10 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 7084 | 7488 |
| YP_009007488.1 | NC_023580_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22977 | 23318 |
| YP_009007540.1 | NC_023580_p73 | GIY-YIG homing endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46974 | 47528 |
| YP_009007547.1 | NC_023580_p80 | hypothetical protein | phrog_10032 | unknown function | unknown function | 1 | 50222 | 50386 |
| YP_009007476.1 | NC_023580_p9 | hypothetical protein | phrog_1929 | head-tail connector protein | connector | 1 | 6768 | 7094 |
| YP_009007511.1 | NC_023580_p44 | toxin in toxin/antitoxin system (RelE-like) | phrog_1213 | RelE-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 33197 | 33508 |
| YP_009007556.1 | NC_023580_p89 | hypothetical protein | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51808 | 52347 |
| YP_009007479.1 | NC_023580_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8521 | 9457 |
| YP_009007494.1 | NC_023580_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25723 | 25872 |
| YP_009007524.1 | NC_023580_p57 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 39601 | 39879 |
| YP_009007514.1 | NC_023580_p47 | immunity repressor | phrog_3949 | transcriptional repressor | transcription regulation | -1 | 34482 | 35012 |
| YP_009007507.1 | NC_023580_p40 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 31057 | 31179 |
| YP_009007510.1 | NC_023580_p43 | integrase | phrog_1 | integrase | integration and excision | 1 | 31957 | 33075 |
| YP_009007558.1 | NC_023580_p91 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 53158 | 53304 |
| YP_009007472.1 | NC_023580_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4424 | 5017 |
| YP_009007485.1 | NC_023580_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17383 | 19920 |
| YP_009007468.1 | NC_023580_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| YP_009007565.1 | NC_023580_p98 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 54854 | 55015 |
| YP_009007504.1 | NC_023580_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30554 | 30646 |
| YP_009007490.1 | NC_023580_p23 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23609 | 24247 |
| YP_009007502.1 | NC_023580_p35 | DnaQ-like protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29435 | 30256 |
| YP_009007549.1 | NC_023580_p82 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 50592 | 50783 |
| YP_009007517.1 | NC_023580_p50 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36336 | 36572 |
| YP_009007493.1 | NC_023580_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25420 | 25716 |
| YP_009007482.1 | NC_023580_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 12997 | 14706 |
| YP_009007495.1 | NC_023580_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25869 | 26003 |
| YP_009007503.1 | NC_023580_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30340 | 30561 |
| YP_009007491.1 | NC_023580_p24 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24244 | 25068 |
| YP_009007516.1 | NC_023580_p49 | phage antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35536 | 36339 |
| YP_009007519.1 | NC_023580_p52 | hypothetical protein | phrog_15946 | unknown function | unknown function | 1 | 37584 | 38039 |
| YP_009007520.1 | NC_023580_p53 | hypothetical protein | phrog_1840 | excisionase | integration and excision | 1 | 38145 | 38408 |
| YP_009007480.1 | NC_023580_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8521 | 9072 |
| YP_009007529.1 | NC_023580_p62 | HTH DNA binding protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 41474 | 41839 |
| YP_009007509.1 | NC_023580_p42 | hypothetical protein | phrog_5648 | unknown function | unknown function | -1 | 31346 | 31582 |
| YP_009007471.1 | NC_023580_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3585 | 4340 |
| YP_009007554.1 | NC_023580_p87 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 51379 | 51711 |
| YP_009007537.1 | NC_023580_p70 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 46533 | 46679 |
| YP_009007545.1 | NC_023580_p78 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | 1 | 49224 | 49649 |
| YP_009007541.1 | NC_023580_p74 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 47528 | 48487 |
| YP_009007469.1 | NC_023580_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 572 | 2209 |
| YP_009007566.1 | NC_023580_p99 | glycosyl transferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55042 | 56478 |
| YP_009007548.1 | NC_023580_p81 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 50383 | 50595 |
| YP_009007525.1 | NC_023580_p58 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39876 | 40223 |
| YP_009007552.1 | NC_023580_p85 | hypothetical protein | phrog_5186 | unknown function | unknown function | 1 | 51093 | 51266 |
| YP_009007481.1 | NC_023580_p14 | tapemeasure | phrog_1942 | tail length tape measure protein | tail | 1 | 9475 | 12996 |
| YP_009007553.1 | NC_023580_p86 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 51263 | 51382 |
| YP_009007497.1 | NC_023580_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26300 | 27571 |
| YP_009007564.1 | NC_023580_p97 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 54619 | 54861 |