Genomic map of Mycobacterium phage Saal (NC_023580)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023580
Definition
Mycobacterium phage Saal, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
REFSEQ
Length
57775
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
101
%GC
61.28
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009007483.1 NC_023580_p16 minor tail protein phrog_110 minor tail protein tail 1 14790 16499
YP_009007470.1 NC_023580_p3 portal protein phrog_104 portal protein head and packaging 1 2240 3598
YP_009007499.1 NC_023580_p32 holin phrog_443 holin lysis 1 28586 28819
YP_009007496.1 NC_023580_p29 hypothetical protein phrog_747 unknown function unknown function 1 26070 26303
YP_009007557.1 NC_023580_p90 hypothetical protein phrog_1467 unknown function unknown function 1 52344 53015
YP_009007478.1 NC_023580_p11 major tail subunit phrog_476 major tail protein tail 1 7598 8407
YP_009007527.1 NC_023580_p60 hypothetical protein phrog_2096 unknown function unknown function 1 40714 41199
YP_009007513.1 NC_023580_p46 hypothetical protein phrog_1948 unknown function unknown function -1 33764 34249
YP_009007489.1 NC_023580_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23341 23595
YP_009007518.1 NC_023580_p51 hypothetical protein phrog_4652 unknown function unknown function 1 36823 37569
YP_009007543.1 NC_023580_p76 hypothetical protein phrog_11384 unknown function unknown function 1 48749 49036
YP_009007530.1 NC_023580_p63 hypothetical protein phrog_2078 unknown function unknown function 1 41839 41994
YP_009007508.1 NC_023580_p41 hypothetical protein phrog_2437 unknown function unknown function -1 31179 31346
YP_009007536.1 NC_023580_p69 hypothetical protein phrog_7443 unknown function unknown function 1 46312 46533
YP_009007568.1 NC_023580_p101 glycosyl transferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56684 57307
YP_009007535.1 NC_023580_p68 DNA helicase/methylase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 43796 46315
YP_009007484.1 NC_023580_p17 minor tail protein phrog_732 minor tail protein tail 1 16541 17386
YP_009007528.1 NC_023580_p61 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 41196 41477
YP_009007563.1 NC_023580_p96 hypothetical protein phrog_1186 unknown function unknown function 1 54209 54622
YP_009007534.1 NC_023580_p67 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43437 43799
YP_009007515.1 NC_023580_p48 hypothetical protein phrog_6267 transcriptional repressor transcription regulation 1 35176 35469
YP_009007539.1 NC_023580_p72 hypothetical protein phrog_1311 unknown function unknown function 1 46825 46974
YP_009007474.1 NC_023580_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5866 6435
YP_009007544.1 NC_023580_p77 hypothetical protein phrog_1943 unknown function unknown function 1 49033 49227
YP_009007501.1 NC_023580_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29215 29448
YP_009007522.1 NC_023580_p55 hypothetical protein phrog_3381 unknown function unknown function 1 38551 38727
YP_009007506.1 NC_023580_p39 hypothetical protein phrog_7480 unknown function unknown function -1 30854 31060
YP_009007555.1 NC_023580_p88 hypothetical protein phrog_6194 unknown function unknown function 1 51708 51785
YP_009007526.1 NC_023580_p59 WhiB phrog_1333 unknown function unknown function 1 40223 40717
YP_009007523.1 NC_023580_p56 hypothetical protein phrog_1797 unknown function unknown function 1 38724 39521
YP_009007559.1 NC_023580_p92 hypothetical protein phrog_13974 membrane protein moron, auxiliary metabolic gene and host takeover 1 53301 53603
YP_009007505.1 NC_023580_p38 hypothetical protein phrog_10622 unknown function unknown function -1 30715 30861
YP_009007512.1 NC_023580_p45 antitoxin in toxin/antitoxin system (RelB-like) phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 33505 33753
YP_009007487.1 NC_023580_p20 minor tail protein phrog_2106 minor tail protein tail 1 21800 22963
YP_009007473.1 NC_023580_p6 major capsid protein phrog_267 major head protein head and packaging 1 5036 5857
YP_009007551.1 NC_023580_p84 hypothetical protein phrog_1545 unknown function unknown function 1 50959 51096
YP_009007546.1 NC_023580_p79 MPME1 protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 49849 50220
YP_009007542.1 NC_023580_p75 hypothetical protein phrog_2080 unknown function unknown function 1 48487 48756
YP_009007561.1 NC_023580_p94 hypothetical protein phrog_419 unknown function unknown function 1 53731 54012
YP_009007521.1 NC_023580_p54 hypothetical protein phrog_1816 unknown function unknown function 1 38405 38554
YP_009007500.1 NC_023580_p33 hypothetical protein phrog_404 minor tail protein tail 1 28816 29190
YP_009007498.1 NC_023580_p31 lysin B phrog_102 endolysin lysis 1 27571 28572
YP_009007538.1 NC_023580_p71 hypothetical protein phrog_2070 unknown function unknown function 1 46676 46828
YP_009007560.1 NC_023580_p93 hypothetical protein phrog_14508 unknown function unknown function 1 53600 53722
YP_009007531.1 NC_023580_p64 hypothetical protein phrog_1834 unknown function unknown function 1 41994 42224
YP_009007550.1 NC_023580_p83 hypothetical protein phrog_1091 unknown function unknown function 1 50780 50959
YP_009007532.1 NC_023580_p65 hypothetical protein phrog_2060 DNA methyltransferase other 1 42221 42562
YP_009007492.1 NC_023580_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25074 25271
YP_009007562.1 NC_023580_p95 hypothetical protein phrog_1694 unknown function unknown function 1 54012 54212
YP_009007533.1 NC_023580_p66 AAA ATPase phrog_1366 unknown function unknown function 1 42559 43440
YP_009007567.1 NC_023580_p100 glycosyl transferase phrog_1693 unknown function unknown function 1 56493 56687
YP_009007475.1 NC_023580_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6432 6761
YP_009007486.1 NC_023580_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19917 21803
YP_009007477.1 NC_023580_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7084 7488
YP_009007488.1 NC_023580_p21 hypothetical protein phrog_240 head protein head and packaging 1 22977 23318
YP_009007540.1 NC_023580_p73 GIY-YIG homing endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 46974 47528
YP_009007547.1 NC_023580_p80 hypothetical protein phrog_10032 unknown function unknown function 1 50222 50386
YP_009007476.1 NC_023580_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6768 7094
YP_009007511.1 NC_023580_p44 toxin in toxin/antitoxin system (RelE-like) phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 33197 33508
YP_009007556.1 NC_023580_p89 hypothetical protein phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 51808 52347
YP_009007479.1 NC_023580_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8521 9457
YP_009007494.1 NC_023580_p27 hypothetical protein phrog_932 unknown function unknown function 1 25723 25872
YP_009007524.1 NC_023580_p57 hypothetical protein phrog_1849 unknown function unknown function 1 39601 39879
YP_009007514.1 NC_023580_p47 immunity repressor phrog_3949 transcriptional repressor transcription regulation -1 34482 35012
YP_009007507.1 NC_023580_p40 hypothetical protein phrog_3693 unknown function unknown function -1 31057 31179
YP_009007510.1 NC_023580_p43 integrase phrog_1 integrase integration and excision 1 31957 33075
YP_009007558.1 NC_023580_p91 hypothetical protein phrog_1869 unknown function unknown function 1 53158 53304
YP_009007472.1 NC_023580_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4424 5017
YP_009007485.1 NC_023580_p18 minor tail protein phrog_346 minor tail protein tail 1 17383 19920
YP_009007468.1 NC_023580_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
YP_009007565.1 NC_023580_p98 hypothetical protein phrog_2057 unknown function unknown function 1 54854 55015
YP_009007504.1 NC_023580_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30554 30646
YP_009007490.1 NC_023580_p23 minor tail protein phrog_2012 minor tail protein tail 1 23609 24247
YP_009007502.1 NC_023580_p35 DnaQ-like protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29435 30256
YP_009007549.1 NC_023580_p82 hypothetical protein phrog_1901 unknown function unknown function 1 50592 50783
YP_009007517.1 NC_023580_p50 hypothetical protein phrog_2025 unknown function unknown function 1 36336 36572
YP_009007493.1 NC_023580_p26 hypothetical protein phrog_411 unknown function unknown function 1 25420 25716
YP_009007482.1 NC_023580_p15 minor tail protein phrog_106 minor tail protein tail 1 12997 14706
YP_009007495.1 NC_023580_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25869 26003
YP_009007503.1 NC_023580_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30340 30561
YP_009007491.1 NC_023580_p24 minor tail protein phrog_754 minor tail protein tail 1 24244 25068
YP_009007516.1 NC_023580_p49 phage antirepressor phrog_130 anti-repressor Ant transcription regulation 1 35536 36339
YP_009007519.1 NC_023580_p52 hypothetical protein phrog_15946 unknown function unknown function 1 37584 38039
YP_009007520.1 NC_023580_p53 hypothetical protein phrog_1840 excisionase integration and excision 1 38145 38408
YP_009007480.1 NC_023580_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8521 9072
YP_009007529.1 NC_023580_p62 HTH DNA binding protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 41474 41839
YP_009007509.1 NC_023580_p42 hypothetical protein phrog_5648 unknown function unknown function -1 31346 31582
YP_009007471.1 NC_023580_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3585 4340
YP_009007554.1 NC_023580_p87 hypothetical protein phrog_2278 unknown function unknown function 1 51379 51711
YP_009007537.1 NC_023580_p70 hypothetical protein phrog_2704 unknown function unknown function 1 46533 46679
YP_009007545.1 NC_023580_p78 hypothetical protein phrog_1573 DNA methyltransferase other 1 49224 49649
YP_009007541.1 NC_023580_p74 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 47528 48487
YP_009007469.1 NC_023580_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 572 2209
YP_009007566.1 NC_023580_p99 glycosyl transferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55042 56478
YP_009007548.1 NC_023580_p81 hypothetical protein phrog_2939 unknown function unknown function 1 50383 50595
YP_009007525.1 NC_023580_p58 hypothetical protein phrog_658 unknown function unknown function 1 39876 40223
YP_009007552.1 NC_023580_p85 hypothetical protein phrog_5186 unknown function unknown function 1 51093 51266
YP_009007481.1 NC_023580_p14 tapemeasure phrog_1942 tail length tape measure protein tail 1 9475 12996
YP_009007553.1 NC_023580_p86 hypothetical protein phrog_4126 unknown function unknown function 1 51263 51382
YP_009007497.1 NC_023580_p30 lysin A phrog_700 endolysin lysis 1 26300 27571
YP_009007564.1 NC_023580_p97 hypothetical protein phrog_1385 unknown function unknown function 1 54619 54861