Genomic map of Pseudomonas phage TL (NC_023583)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023583
Definition
Pseudomonas phage TL complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus.
DB of origin
REFSEQ
Length
45696
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
65
%GC
52.36
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009007793.1 NC_023583_p1 hypothetical protein phrog_34855 unknown function unknown function 1 412 579
YP_009007799.1 NC_023583_p7 hypothetical protein phrog_10516 unknown function unknown function 1 3238 3501
YP_009007853.1 NC_023583_p61 hypothetical protein phrog_8161 unknown function unknown function -1 39917 40108
YP_009007826.1 NC_023583_p34 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20409 20969
YP_009007845.1 NC_023583_p53 phage particle protein phrog_3287 virion structural protein head and packaging -1 34333 35874
YP_009007832.1 NC_023583_p40 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 23874 24224
YP_009007838.1 NC_023583_p46 phage particle protein phrog_8295 virion structural protein head and packaging -1 26178 27065
YP_009007856.1 NC_023583_p64 lysozyme phrog_7 endolysin lysis -1 43730 44227
YP_009007827.1 NC_023583_p35 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis 1 20947 21450
YP_009007828.1 NC_023583_p36 hypothetical protein phrog_8565 unknown function unknown function 1 21422 21706
YP_009007847.1 NC_023583_p55 hypothetical protein phrog_8140 unknown function unknown function -1 36520 36768
YP_009007794.1 NC_023583_p2 hypothetical protein phrog_1448 unknown function unknown function 1 1322 1876
YP_009007810.1 NC_023583_p18 hypothetical protein phrog_9335 unknown function unknown function 1 11891 12112
YP_009007814.1 NC_023583_p22 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 13903 15612
YP_009007820.1 NC_023583_p28 holin phrog_7045 holin lysis 1 16966 17250
YP_009007830.1 NC_023583_p38 5'-3'-exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 22240 23070
YP_009007842.1 NC_023583_p50 phage particle protein phrog_7477 unknown function unknown function -1 32294 33235
YP_009007803.1 NC_023583_p11 hypothetical protein phrog_23984 unknown function unknown function 1 5055 5273
YP_009007849.1 NC_023583_p57 phage particle protein phrog_2941 virion structural protein head and packaging -1 36954 37580
YP_009007834.1 NC_023583_p42 hypothetical protein phrog_9960 unknown function unknown function 1 24975 25193
YP_009007843.1 NC_023583_p51 hypothetical protein phrog_7642 unknown function unknown function -1 33216 33650
YP_009007818.1 NC_023583_p26 hypothetical protein phrog_9813 unknown function unknown function 1 16633 16824
YP_009007835.1 NC_023583_p43 hypothetical protein phrog_2251 unknown function unknown function 1 25197 25406
YP_009007817.1 NC_023583_p25 hypothetical protein phrog_12255 unknown function unknown function 1 16419 16652
YP_009007807.1 NC_023583_p15 hypothetical protein phrog_3815 COOH.NH2 ligase other 1 8255 9055
YP_009007806.1 NC_023583_p14 hypothetical protein phrog_7973 unknown function unknown function 1 7299 8258
YP_009007844.1 NC_023583_p52 hypothetical protein phrog_8092 unknown function unknown function -1 33647 34336
YP_009007840.1 NC_023583_p48 phage particle protein phrog_7725 virion structural protein head and packaging -1 30395 31909
YP_009007833.1 NC_023583_p41 hypothetical protein phrog_221 metallo-phosphoesterase other 1 24217 24978
YP_009007855.1 NC_023583_p63 terminase large subunit phrog_2 terminase large subunit head and packaging -1 42282 43730
YP_009007857.1 NC_023583_p65 terminase small subunit phrog_51 terminase small subunit head and packaging -1 44160 44618
YP_009007823.1 NC_023583_p31 DNA polymerase part II phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 18033 19214
YP_009007846.1 NC_023583_p54 tail fiber protein phrog_5795 tail protein tail -1 35883 36530
YP_009007841.1 NC_023583_p49 phage particle protein phrog_9927 virion structural protein head and packaging -1 31914 32294
YP_009007822.1 NC_023583_p30 hypothetical protein phrog_9754 unknown function unknown function 1 17835 18032
YP_009007812.1 NC_023583_p20 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover 1 13127 13525
YP_009007837.1 NC_023583_p45 hypothetical protein phrog_8259 unknown function unknown function -1 25807 26163
YP_009007811.1 NC_023583_p19 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover 1 12243 13127
YP_009007798.1 NC_023583_p6 hypothetical protein phrog_11682 unknown function unknown function 1 3082 3228
YP_009007815.1 NC_023583_p23 3'-5'-exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 15596 16105
YP_009007805.1 NC_023583_p13 hypothetical protein phrog_9504 unknown function unknown function 1 6261 7280
YP_009007801.1 NC_023583_p9 hypothetical protein phrog_8299 unknown function unknown function 1 4060 4485
YP_009007851.1 NC_023583_p59 major head protein phrog_1328 major head protein head and packaging -1 37953 38906
YP_009007816.1 NC_023583_p24 hypothetical protein phrog_4590 unknown function unknown function 1 16072 16383
YP_009007804.1 NC_023583_p12 transposase fusion protein phrog_200 lipoprotein other 1 5283 6107
YP_009007808.1 NC_023583_p16 hypothetical protein phrog_4877 unknown function unknown function 1 9048 9617
YP_009007809.1 NC_023583_p17 toL-glutamine-D-fructose-6-phosphate aminotransferase phrog_7631 amidoligase enzyme other 1 9593 10768
YP_009007852.1 NC_023583_p60 scaffolding protein phrog_3927 head scaffolding protein head and packaging -1 38925 39917
YP_009007796.1 NC_023583_p4 hypothetical protein phrog_10887 unknown function unknown function 1 2303 2443
YP_009007802.1 NC_023583_p10 hypothetical protein phrog_11110 unknown function unknown function 1 4616 4828
YP_009007825.1 NC_023583_p33 DNA polymerase part III phrog_24147 DNA polymerase DNA, RNA and nucleotide metabolism 1 20058 20339
YP_009007850.1 NC_023583_p58 hypothetical protein phrog_3982 unknown function unknown function -1 37584 37904
YP_009007848.1 NC_023583_p56 hypothetical protein phrog_402 unknown function unknown function -1 36752 36943
YP_009007836.1 NC_023583_p44 hypothetical protein phrog_8402 unknown function unknown function 1 25393 25599
YP_009007839.1 NC_023583_p47 phage particle protein phrog_6958 virion structural protein head and packaging -1 27077 30244
YP_009007829.1 NC_023583_p37 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 21706 22155
YP_009007821.1 NC_023583_p29 hypothetical protein phrog_7819 tail length tape measure protein tail 1 17375 17830
YP_009007795.1 NC_023583_p3 hypothetical protein phrog_9596 unknown function unknown function 1 2088 2306
YP_009007824.1 NC_023583_p32 endonuclease phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 19284 19700
YP_009007800.1 NC_023583_p8 hypothetical protein phrog_9861 unknown function unknown function 1 3491 3871
YP_009007819.1 NC_023583_p27 hypothetical protein phrog_9555 unknown function unknown function 1 16814 16975
YP_009007813.1 NC_023583_p21 hypothetical protein phrog_8197 unknown function unknown function 1 13525 13902
YP_009007854.1 NC_023583_p62 portal protein phrog_1216 portal protein head and packaging -1 40162 42282
YP_009007831.1 NC_023583_p39 hypothetical protein phrog_7967 unknown function unknown function 1 23045 24031
YP_009007797.1 NC_023583_p5 hypothetical protein phrog_12073 unknown function unknown function 1 2623 2805