Genomic map of Acinetobacter phage IME_AB3 (NC_023590)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023590
Definition
Acinetobacter phage IME_AB3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lokivirus; Acinetobacter virus IMEAB3.
DB of origin
REFSEQ
Length
43050
Host Name
Acinetobacter baumannii
Host domain
Bacteria
Is prophage?
undef
Number of proteins
57
%GC
45.47
Number of singletons
20
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009008521.1 NC_023590_p17 DNA/RNA helicase protein phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 9334 10992
YP_009008510.1 NC_023590_p6 hypothetical protein singleton unknown function unknown function -1 1390 1605
YP_009008542.1 NC_023590_p38 scaffold protein phrog_206 head scaffolding protein head and packaging -1 31434 32153
YP_009008516.1 NC_023590_p12 MazG pyrophosphatase phrog_229 MazG-like pyrophosphatase other 1 5667 6338
YP_009008515.1 NC_023590_p11 replicative primase/helicase phrog_3022 DNA primase DNA, RNA and nucleotide metabolism 1 3391 5667
YP_009008544.1 NC_023590_p40 portal protein phrog_145 portal protein head and packaging -1 33102 34649
YP_009008543.1 NC_023590_p39 head protein phrog_241 head morphogenesis head and packaging -1 32165 33082
YP_009008505.1 NC_023590_p1 hypothetical protein singleton unknown function unknown function -1 449 571
YP_009008530.1 NC_023590_p26 capsid and scaffold protein phrog_6040 unknown function unknown function -1 19058 21769
YP_009008523.1 NC_023590_p19 DNA polymerase subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 11399 12388
YP_009008518.1 NC_023590_p14 recombinase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 6793 7497
YP_009008513.1 NC_023590_p9 hypothetical protein singleton unknown function unknown function 1 2851 3024
YP_009008540.1 NC_023590_p36 hypothetical protein singleton unknown function unknown function -1 30039 30377
YP_009008546.1 NC_023590_p42 terminase small subunit phrog_5334 terminase small subunit head and packaging -1 36219 36734
YP_009008549.1 NC_023590_p45 hypothetical protein phrog_26164 unknown function unknown function -1 37639 38013
YP_009008511.1 NC_023590_p7 hypothetical protein singleton unknown function unknown function -1 1602 1829
YP_009008556.1 NC_023590_p52 endonuclease phrog_824 unknown function unknown function -1 40505 41164
YP_009008531.1 NC_023590_p27 hypothetical protein phrog_1302 distal tail protein tail -1 21756 22373
YP_009008560.1 NC_023590_p56 hypothetical protein singleton unknown function unknown function -1 42219 42542
YP_009008520.1 NC_023590_p16 RecB exonuclease phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 8384 9328
YP_009008532.1 NC_023590_p28 tail tape measure protein phrog_3336 tail length tape measure protein tail -1 22378 25854
YP_009008555.1 NC_023590_p51 hypothetical protein singleton unknown function unknown function -1 40305 40508
YP_009008534.1 NC_023590_p30 tail chaperonin protein phrog_3817 tail chaperonin tail -1 26307 26621
YP_009008529.1 NC_023590_p25 hypothetical protein phrog_2048 tail protein tail -1 18518 19054
YP_009008527.1 NC_023590_p23 tail protein phrog_31 central tail fiber J tail -1 15617 18079
YP_009008547.1 NC_023590_p43 endolysin phrog_181 endolysin lysis -1 36809 37441
YP_009008554.1 NC_023590_p50 hypothetical protein singleton unknown function unknown function -1 40002 40265
YP_009008536.1 NC_023590_p32 major tail tube protein phrog_290 minor tail protein tail -1 27172 28701
YP_009008517.1 NC_023590_p13 hypothetical protein phrog_2480 unknown function unknown function 1 6319 6792
YP_009008550.1 NC_023590_p46 hypothetical protein phrog_7597 unknown function unknown function -1 38280 38879
YP_009008525.1 NC_023590_p21 hypothetical protein singleton unknown function unknown function -1 14644 15138
YP_009008522.1 NC_023590_p18 hypothetical protein phrog_17558 unknown function unknown function 1 11002 11415
YP_009008524.1 NC_023590_p20 DNA polymerase subunit phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism 1 12388 14382
YP_009008533.1 NC_023590_p29 tail completion protein phrog_169 tail completion or Neck1 protein connector -1 25855 26295
YP_009008545.1 NC_023590_p41 terminase large subunit phrog_2 terminase large subunit head and packaging -1 34661 36250
YP_009008548.1 NC_023590_p44 holin phrog_1356 holin lysis -1 37419 37670
YP_009008514.1 NC_023590_p10 hypothetical protein singleton unknown function unknown function 1 3156 3404
YP_009008508.1 NC_023590_p4 hypothetical protein singleton unknown function unknown function -1 906 1178
YP_009008512.1 NC_023590_p8 hypothetical protein singleton unknown function unknown function -1 1927 2517
YP_009008537.1 NC_023590_p33 minor tail protein phrog_179 tail terminator connector -1 28714 29157
YP_009008507.1 NC_023590_p3 hypothetical protein singleton unknown function unknown function -1 746 949
YP_009008506.1 NC_023590_p2 hypothetical protein singleton unknown function unknown function -1 522 746
YP_009008561.1 NC_023590_p57 hypothetical protein singleton unknown function unknown function -1 42659 42985
YP_009008557.1 NC_023590_p53 hypothetical protein singleton unknown function unknown function -1 41157 41429
YP_009008528.1 NC_023590_p24 hypothetical protein phrog_2134 unknown function unknown function -1 18081 18518
YP_009008538.1 NC_023590_p34 head-tail joining protein phrog_161 head closure Hc1 connector -1 29154 29537
YP_009008541.1 NC_023590_p37 major capsid protein phrog_247 major head protein head and packaging -1 30438 31421
YP_009008539.1 NC_023590_p35 structural protein phrog_477 head-tail adaptor Ad1 connector -1 29541 30029
YP_009008553.1 NC_023590_p49 hypothetical protein phrog_9844 unknown function unknown function -1 39470 40000
YP_009008551.1 NC_023590_p47 hypothetical protein phrog_6168 unknown function unknown function -1 38939 39121
YP_009008558.1 NC_023590_p54 hypothetical protein singleton unknown function unknown function -1 41488 41934
YP_009008519.1 NC_023590_p15 single-stranded DNA-binding protein phrog_6015 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 7534 8316
YP_009008509.1 NC_023590_p5 hypothetical protein singleton unknown function unknown function -1 1181 1417
YP_009008559.1 NC_023590_p55 hypothetical protein singleton unknown function unknown function -1 41983 42222
YP_009008526.1 NC_023590_p22 hypothetical protein singleton unknown function unknown function -1 15135 15617
YP_009008552.1 NC_023590_p48 hypothetical protein phrog_9241 unknown function unknown function -1 39118 39480
YP_009008535.1 NC_023590_p31 tail chaperonin protein phrog_313 Tail assembly chaperone tail -1 26642 27121