| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023590 |
Definition |
Acinetobacter phage IME_AB3, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Lokivirus; Acinetobacter virus IMEAB3. |
DB of origin |
REFSEQ |
Length |
43050 |
Host Name |
Acinetobacter baumannii |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
57 |
%GC |
45.47 |
Number of singletons |
20 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009008521.1 | NC_023590_p17 | DNA/RNA helicase protein | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9334 | 10992 |
| YP_009008510.1 | NC_023590_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1390 | 1605 |
| YP_009008542.1 | NC_023590_p38 | scaffold protein | phrog_206 | head scaffolding protein | head and packaging | -1 | 31434 | 32153 |
| YP_009008516.1 | NC_023590_p12 | MazG pyrophosphatase | phrog_229 | MazG-like pyrophosphatase | other | 1 | 5667 | 6338 |
| YP_009008515.1 | NC_023590_p11 | replicative primase/helicase | phrog_3022 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 3391 | 5667 |
| YP_009008544.1 | NC_023590_p40 | portal protein | phrog_145 | portal protein | head and packaging | -1 | 33102 | 34649 |
| YP_009008543.1 | NC_023590_p39 | head protein | phrog_241 | head morphogenesis | head and packaging | -1 | 32165 | 33082 |
| YP_009008505.1 | NC_023590_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 449 | 571 |
| YP_009008530.1 | NC_023590_p26 | capsid and scaffold protein | phrog_6040 | unknown function | unknown function | -1 | 19058 | 21769 |
| YP_009008523.1 | NC_023590_p19 | DNA polymerase subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 11399 | 12388 |
| YP_009008518.1 | NC_023590_p14 | recombinase | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 6793 | 7497 |
| YP_009008513.1 | NC_023590_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2851 | 3024 |
| YP_009008540.1 | NC_023590_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30039 | 30377 |
| YP_009008546.1 | NC_023590_p42 | terminase small subunit | phrog_5334 | terminase small subunit | head and packaging | -1 | 36219 | 36734 |
| YP_009008549.1 | NC_023590_p45 | hypothetical protein | phrog_26164 | unknown function | unknown function | -1 | 37639 | 38013 |
| YP_009008511.1 | NC_023590_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1602 | 1829 |
| YP_009008556.1 | NC_023590_p52 | endonuclease | phrog_824 | unknown function | unknown function | -1 | 40505 | 41164 |
| YP_009008531.1 | NC_023590_p27 | hypothetical protein | phrog_1302 | distal tail protein | tail | -1 | 21756 | 22373 |
| YP_009008560.1 | NC_023590_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42219 | 42542 |
| YP_009008520.1 | NC_023590_p16 | RecB exonuclease | phrog_1990 | Cas4-domain exonuclease | DNA, RNA and nucleotide metabolism | 1 | 8384 | 9328 |
| YP_009008532.1 | NC_023590_p28 | tail tape measure protein | phrog_3336 | tail length tape measure protein | tail | -1 | 22378 | 25854 |
| YP_009008555.1 | NC_023590_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40305 | 40508 |
| YP_009008534.1 | NC_023590_p30 | tail chaperonin protein | phrog_3817 | tail chaperonin | tail | -1 | 26307 | 26621 |
| YP_009008529.1 | NC_023590_p25 | hypothetical protein | phrog_2048 | tail protein | tail | -1 | 18518 | 19054 |
| YP_009008527.1 | NC_023590_p23 | tail protein | phrog_31 | central tail fiber J | tail | -1 | 15617 | 18079 |
| YP_009008547.1 | NC_023590_p43 | endolysin | phrog_181 | endolysin | lysis | -1 | 36809 | 37441 |
| YP_009008554.1 | NC_023590_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40002 | 40265 |
| YP_009008536.1 | NC_023590_p32 | major tail tube protein | phrog_290 | minor tail protein | tail | -1 | 27172 | 28701 |
| YP_009008517.1 | NC_023590_p13 | hypothetical protein | phrog_2480 | unknown function | unknown function | 1 | 6319 | 6792 |
| YP_009008550.1 | NC_023590_p46 | hypothetical protein | phrog_7597 | unknown function | unknown function | -1 | 38280 | 38879 |
| YP_009008525.1 | NC_023590_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14644 | 15138 |
| YP_009008522.1 | NC_023590_p18 | hypothetical protein | phrog_17558 | unknown function | unknown function | 1 | 11002 | 11415 |
| YP_009008524.1 | NC_023590_p20 | DNA polymerase subunit | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 12388 | 14382 |
| YP_009008533.1 | NC_023590_p29 | tail completion protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 25855 | 26295 |
| YP_009008545.1 | NC_023590_p41 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | -1 | 34661 | 36250 |
| YP_009008548.1 | NC_023590_p44 | holin | phrog_1356 | holin | lysis | -1 | 37419 | 37670 |
| YP_009008514.1 | NC_023590_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3156 | 3404 |
| YP_009008508.1 | NC_023590_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 906 | 1178 |
| YP_009008512.1 | NC_023590_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1927 | 2517 |
| YP_009008537.1 | NC_023590_p33 | minor tail protein | phrog_179 | tail terminator | connector | -1 | 28714 | 29157 |
| YP_009008507.1 | NC_023590_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 746 | 949 |
| YP_009008506.1 | NC_023590_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 522 | 746 |
| YP_009008561.1 | NC_023590_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42659 | 42985 |
| YP_009008557.1 | NC_023590_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41157 | 41429 |
| YP_009008528.1 | NC_023590_p24 | hypothetical protein | phrog_2134 | unknown function | unknown function | -1 | 18081 | 18518 |
| YP_009008538.1 | NC_023590_p34 | head-tail joining protein | phrog_161 | head closure Hc1 | connector | -1 | 29154 | 29537 |
| YP_009008541.1 | NC_023590_p37 | major capsid protein | phrog_247 | major head protein | head and packaging | -1 | 30438 | 31421 |
| YP_009008539.1 | NC_023590_p35 | structural protein | phrog_477 | head-tail adaptor Ad1 | connector | -1 | 29541 | 30029 |
| YP_009008553.1 | NC_023590_p49 | hypothetical protein | phrog_9844 | unknown function | unknown function | -1 | 39470 | 40000 |
| YP_009008551.1 | NC_023590_p47 | hypothetical protein | phrog_6168 | unknown function | unknown function | -1 | 38939 | 39121 |
| YP_009008558.1 | NC_023590_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41488 | 41934 |
| YP_009008519.1 | NC_023590_p15 | single-stranded DNA-binding protein | phrog_6015 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7534 | 8316 |
| YP_009008509.1 | NC_023590_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1181 | 1417 |
| YP_009008559.1 | NC_023590_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41983 | 42222 |
| YP_009008526.1 | NC_023590_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15135 | 15617 |
| YP_009008552.1 | NC_023590_p48 | hypothetical protein | phrog_9241 | unknown function | unknown function | -1 | 39118 | 39480 |
| YP_009008535.1 | NC_023590_p31 | tail chaperonin protein | phrog_313 | Tail assembly chaperone | tail | -1 | 26642 | 27121 |