Genomic map of Enterococcus phage IME_EF3 (NC_023595)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023595
Definition
Enterococcus phage IME_EF3, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Efquatrovirus; Enterococcus virus EF3.
DB of origin
REFSEQ
Length
41687
Host Name
Enterococcus faecalis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
34.59
Number of singletons
5
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009008893.1 NC_023595_p10 capsid protein phrog_10 major head protein head and packaging 1 5720 6637
YP_009008940.1 NC_023595_p31 hypothetical protein phrog_6479 unknown function unknown function -1 24680 25393
YP_009008896.1 NC_023595_p7 portal protein phrog_12 portal protein head and packaging 1 3660 4811
YP_009008898.1 NC_023595_p5 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1700 3421
YP_009008907.1 NC_023595_p64 hypothetical protein phrog_21533 unknown function unknown function -1 38789 39151
YP_009008926.1 NC_023595_p45 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 30671 31975
YP_009008939.1 NC_023595_p32 hypothetical protein phrog_10605 unknown function unknown function -1 25471 25710
YP_009008949.1 NC_023595_p22 hypothetical protein phrog_7298 unknown function unknown function 1 18709 18996
YP_009008902.1 NC_023595_p69 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40916 41287
YP_009008937.1 NC_023595_p34 DUF1351 protein phrog_674 unknown function unknown function -1 26005 26823
YP_009008933.1 NC_023595_p38 HNH homing endonuclease-like protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27912 28391
YP_009008947.1 NC_023595_p24 holin class II phrog_297 holin lysis 1 19435 19671
YP_009008927.1 NC_023595_p44 hypothetical protein phrog_14055 unknown function unknown function -1 30498 30674
YP_009008895.1 NC_023595_p8 head maturation protease phrog_80 head maturation protease head and packaging 1 4798 5361
YP_009008938.1 NC_023595_p33 hypothetical protein phrog_20271 unknown function unknown function -1 25711 26004
YP_009008899.1 NC_023595_p4 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1050 1523
YP_009008894.1 NC_023595_p9 capsid protein singleton unknown function unknown function 1 5431 5760
YP_009008925.1 NC_023595_p46 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 31959 32447
YP_009008918.1 NC_023595_p53 hypothetical protein phrog_1083 unknown function unknown function -1 34241 34561
YP_009008911.1 NC_023595_p60 transcriptional regulator phrog_13841 transcriptional regulator transcription regulation -1 37386 37604
YP_009008934.1 NC_023595_p37 metallo-beta-lactamase domain protein phrog_392 metal-dependent hydrolase other -1 27122 27901
YP_009008891.1 NC_023595_p12 head-tail joining protein phrog_40 head-tail adaptor Ad1 connector 1 7004 7300
YP_009008913.1 NC_023595_p58 hypothetical protein phrog_16817 unknown function unknown function -1 36963 37178
YP_009008917.1 NC_023595_p54 hypothetical protein phrog_25936 unknown function unknown function -1 34555 34761
YP_009008943.1 NC_023595_p28 DNA polymerase phrog_1252 DNA polymerase DNA, RNA and nucleotide metabolism -1 21302 23593
YP_009008915.1 NC_023595_p56 hypothetical protein phrog_10328 unknown function unknown function -1 36533 36730
YP_009008890.1 NC_023595_p13 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 7272 7607
YP_009008950.1 NC_023595_p21 minor tail protein phrog_9478 minor tail protein tail 1 17233 18693
YP_009008923.1 NC_023595_p48 hypothetical protein phrog_10687 unknown function unknown function -1 32811 33017
YP_009008935.1 NC_023595_p36 hypothetical protein singleton unknown function unknown function -1 26985 27149
YP_009008909.1 NC_023595_p62 hypothetical protein phrog_3523 unknown function unknown function -1 37977 38600
YP_009008931.1 NC_023595_p40 DUF3310 protein phrog_10602 nucleotide kinase other -1 28608 29129
YP_009008951.1 NC_023595_p20 host specificity protein phrog_17633 minor tail protein tail 1 16635 17243
YP_009008941.1 NC_023595_p30 hypothetical protein phrog_9882 unknown function unknown function -1 24390 24614
YP_009008901.1 NC_023595_p2 hypothetical protein phrog_10805 unknown function unknown function 1 560 712
YP_009008944.1 NC_023595_p27 hypothetical protein singleton unknown function unknown function -1 20975 21238
YP_009008910.1 NC_023595_p61 hypothetical protein phrog_10318 unknown function unknown function -1 37601 37825
YP_009008948.1 NC_023595_p23 hypothetical protein phrog_689 holin lysis 1 19175 19420
YP_009008921.1 NC_023595_p50 hypothetical protein phrog_11285 unknown function unknown function -1 33182 33451
YP_009008942.1 NC_023595_p29 hypothetical protein phrog_56 DNA methyltransferase other -1 23628 24356
YP_009008920.1 NC_023595_p51 hypothetical protein phrog_1905 unknown function unknown function -1 33499 33942
YP_009008952.1 NC_023595_p19 tail component phrog_202 distal tail protein Dit tail 1 14092 16623
YP_009008889.1 NC_023595_p14 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 7604 8011
YP_009008914.1 NC_023595_p57 hypothetical protein phrog_17478 unknown function unknown function -1 36727 36966
YP_009008916.1 NC_023595_p55 DNA primase phrog_864 DNA primase DNA, RNA and nucleotide metabolism -1 34851 36437
YP_009008946.1 NC_023595_p25 lysin, N-acetylmuramoyl-L-alanine amidase phrog_8164 endolysin lysis 1 19668 20654
YP_009021766.1 NC_023595_p41 hypothetical protein phrog_8623 unknown function unknown function -1 29286 29477
YP_009021765.1 NC_023595_p1 homing endonuclease singleton unknown function unknown function 1 34 168
YP_009008908.1 NC_023595_p63 hypothetical protein singleton unknown function unknown function -1 38633 38779
YP_009008919.1 NC_023595_p52 hypothetical protein phrog_9216 unknown function unknown function -1 34016 34204
YP_009008936.1 NC_023595_p35 hypothetical protein phrog_9701 unknown function unknown function -1 26813 26995
YP_009008892.1 NC_023595_p11 hypothetical protein phrog_1696 major tail protein tail 1 6760 6990
YP_009008924.1 NC_023595_p47 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 32440 32811
YP_009008912.1 NC_023595_p59 hypothetical protein phrog_12875 unknown function unknown function -1 37175 37393
YP_009008954.1 NC_023595_p17 tail tape measure chaperone protein phrog_187 head-tail adaptor connector 1 9211 9522
YP_009008955.1 NC_023595_p16 major tail protein phrog_88 major tail protein tail 1 8450 9019
YP_009008906.1 NC_023595_p65 hypothetical protein phrog_16833 unknown function unknown function -1 39145 39528
YP_009008904.1 NC_023595_p67 hypothetical protein phrog_11319 unknown function unknown function 1 40431 40634
YP_009008903.1 NC_023595_p68 hypothetical protein phrog_8190 unknown function unknown function 1 40716 40916
YP_009008900.1 NC_023595_p3 endodeoxyribonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 712 1047
YP_009008932.1 NC_023595_p39 hypothetical protein phrog_8996 unknown function unknown function -1 28388 28606
YP_009008929.1 NC_023595_p42 prim-pol domain protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 29485 30231
YP_009008905.1 NC_023595_p66 hypothetical protein phrog_10739 tail length tape measure protein tail -1 39565 39924
YP_009008888.1 NC_023595_p15 head-tail joining protein phrog_78 tail terminator connector 1 8008 8373
YP_009008945.1 NC_023595_p26 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 20736 20963
YP_009008953.1 NC_023595_p18 tape measure protein phrog_167 tail length tape measure protein tail 1 9779 14011
YP_009008922.1 NC_023595_p49 hypothetical protein phrog_11374 unknown function unknown function -1 33019 33180
YP_009008897.1 NC_023595_p6 hypothetical protein phrog_8943 unknown function unknown function 1 3491 3655
YP_009008928.1 NC_023595_p43 hypothetical protein phrog_11012 unknown function unknown function -1 30244 30438