| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023595 |
Definition |
Enterococcus phage IME_EF3, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Efquatrovirus; Enterococcus virus EF3. |
DB of origin |
REFSEQ |
Length |
41687 |
Host Name |
Enterococcus faecalis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
69 |
%GC |
34.59 |
Number of singletons |
5 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009008893.1 | NC_023595_p10 | capsid protein | phrog_10 | major head protein | head and packaging | 1 | 5720 | 6637 |
| YP_009008940.1 | NC_023595_p31 | hypothetical protein | phrog_6479 | unknown function | unknown function | -1 | 24680 | 25393 |
| YP_009008896.1 | NC_023595_p7 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 3660 | 4811 |
| YP_009008898.1 | NC_023595_p5 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1700 | 3421 |
| YP_009008907.1 | NC_023595_p64 | hypothetical protein | phrog_21533 | unknown function | unknown function | -1 | 38789 | 39151 |
| YP_009008926.1 | NC_023595_p45 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 30671 | 31975 |
| YP_009008939.1 | NC_023595_p32 | hypothetical protein | phrog_10605 | unknown function | unknown function | -1 | 25471 | 25710 |
| YP_009008949.1 | NC_023595_p22 | hypothetical protein | phrog_7298 | unknown function | unknown function | 1 | 18709 | 18996 |
| YP_009008902.1 | NC_023595_p69 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40916 | 41287 |
| YP_009008937.1 | NC_023595_p34 | DUF1351 protein | phrog_674 | unknown function | unknown function | -1 | 26005 | 26823 |
| YP_009008933.1 | NC_023595_p38 | HNH homing endonuclease-like protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 27912 | 28391 |
| YP_009008947.1 | NC_023595_p24 | holin class II | phrog_297 | holin | lysis | 1 | 19435 | 19671 |
| YP_009008927.1 | NC_023595_p44 | hypothetical protein | phrog_14055 | unknown function | unknown function | -1 | 30498 | 30674 |
| YP_009008895.1 | NC_023595_p8 | head maturation protease | phrog_80 | head maturation protease | head and packaging | 1 | 4798 | 5361 |
| YP_009008938.1 | NC_023595_p33 | hypothetical protein | phrog_20271 | unknown function | unknown function | -1 | 25711 | 26004 |
| YP_009008899.1 | NC_023595_p4 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1050 | 1523 |
| YP_009008894.1 | NC_023595_p9 | capsid protein | singleton | unknown function | unknown function | 1 | 5431 | 5760 |
| YP_009008925.1 | NC_023595_p46 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 31959 | 32447 |
| YP_009008918.1 | NC_023595_p53 | hypothetical protein | phrog_1083 | unknown function | unknown function | -1 | 34241 | 34561 |
| YP_009008911.1 | NC_023595_p60 | transcriptional regulator | phrog_13841 | transcriptional regulator | transcription regulation | -1 | 37386 | 37604 |
| YP_009008934.1 | NC_023595_p37 | metallo-beta-lactamase domain protein | phrog_392 | metal-dependent hydrolase | other | -1 | 27122 | 27901 |
| YP_009008891.1 | NC_023595_p12 | head-tail joining protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 7004 | 7300 |
| YP_009008913.1 | NC_023595_p58 | hypothetical protein | phrog_16817 | unknown function | unknown function | -1 | 36963 | 37178 |
| YP_009008917.1 | NC_023595_p54 | hypothetical protein | phrog_25936 | unknown function | unknown function | -1 | 34555 | 34761 |
| YP_009008943.1 | NC_023595_p28 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 21302 | 23593 |
| YP_009008915.1 | NC_023595_p56 | hypothetical protein | phrog_10328 | unknown function | unknown function | -1 | 36533 | 36730 |
| YP_009008890.1 | NC_023595_p13 | head-tail adaptor protein | phrog_25 | head closure Hc1 | connector | 1 | 7272 | 7607 |
| YP_009008950.1 | NC_023595_p21 | minor tail protein | phrog_9478 | minor tail protein | tail | 1 | 17233 | 18693 |
| YP_009008923.1 | NC_023595_p48 | hypothetical protein | phrog_10687 | unknown function | unknown function | -1 | 32811 | 33017 |
| YP_009008935.1 | NC_023595_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26985 | 27149 |
| YP_009008909.1 | NC_023595_p62 | hypothetical protein | phrog_3523 | unknown function | unknown function | -1 | 37977 | 38600 |
| YP_009008931.1 | NC_023595_p40 | DUF3310 protein | phrog_10602 | nucleotide kinase | other | -1 | 28608 | 29129 |
| YP_009008951.1 | NC_023595_p20 | host specificity protein | phrog_17633 | minor tail protein | tail | 1 | 16635 | 17243 |
| YP_009008941.1 | NC_023595_p30 | hypothetical protein | phrog_9882 | unknown function | unknown function | -1 | 24390 | 24614 |
| YP_009008901.1 | NC_023595_p2 | hypothetical protein | phrog_10805 | unknown function | unknown function | 1 | 560 | 712 |
| YP_009008944.1 | NC_023595_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20975 | 21238 |
| YP_009008910.1 | NC_023595_p61 | hypothetical protein | phrog_10318 | unknown function | unknown function | -1 | 37601 | 37825 |
| YP_009008948.1 | NC_023595_p23 | hypothetical protein | phrog_689 | holin | lysis | 1 | 19175 | 19420 |
| YP_009008921.1 | NC_023595_p50 | hypothetical protein | phrog_11285 | unknown function | unknown function | -1 | 33182 | 33451 |
| YP_009008942.1 | NC_023595_p29 | hypothetical protein | phrog_56 | DNA methyltransferase | other | -1 | 23628 | 24356 |
| YP_009008920.1 | NC_023595_p51 | hypothetical protein | phrog_1905 | unknown function | unknown function | -1 | 33499 | 33942 |
| YP_009008952.1 | NC_023595_p19 | tail component | phrog_202 | distal tail protein Dit | tail | 1 | 14092 | 16623 |
| YP_009008889.1 | NC_023595_p14 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7604 | 8011 |
| YP_009008914.1 | NC_023595_p57 | hypothetical protein | phrog_17478 | unknown function | unknown function | -1 | 36727 | 36966 |
| YP_009008916.1 | NC_023595_p55 | DNA primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 34851 | 36437 |
| YP_009008946.1 | NC_023595_p25 | lysin, N-acetylmuramoyl-L-alanine amidase | phrog_8164 | endolysin | lysis | 1 | 19668 | 20654 |
| YP_009021766.1 | NC_023595_p41 | hypothetical protein | phrog_8623 | unknown function | unknown function | -1 | 29286 | 29477 |
| YP_009021765.1 | NC_023595_p1 | homing endonuclease | singleton | unknown function | unknown function | 1 | 34 | 168 |
| YP_009008908.1 | NC_023595_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38633 | 38779 |
| YP_009008919.1 | NC_023595_p52 | hypothetical protein | phrog_9216 | unknown function | unknown function | -1 | 34016 | 34204 |
| YP_009008936.1 | NC_023595_p35 | hypothetical protein | phrog_9701 | unknown function | unknown function | -1 | 26813 | 26995 |
| YP_009008892.1 | NC_023595_p11 | hypothetical protein | phrog_1696 | major tail protein | tail | 1 | 6760 | 6990 |
| YP_009008924.1 | NC_023595_p47 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32440 | 32811 |
| YP_009008912.1 | NC_023595_p59 | hypothetical protein | phrog_12875 | unknown function | unknown function | -1 | 37175 | 37393 |
| YP_009008954.1 | NC_023595_p17 | tail tape measure chaperone protein | phrog_187 | head-tail adaptor | connector | 1 | 9211 | 9522 |
| YP_009008955.1 | NC_023595_p16 | major tail protein | phrog_88 | major tail protein | tail | 1 | 8450 | 9019 |
| YP_009008906.1 | NC_023595_p65 | hypothetical protein | phrog_16833 | unknown function | unknown function | -1 | 39145 | 39528 |
| YP_009008904.1 | NC_023595_p67 | hypothetical protein | phrog_11319 | unknown function | unknown function | 1 | 40431 | 40634 |
| YP_009008903.1 | NC_023595_p68 | hypothetical protein | phrog_8190 | unknown function | unknown function | 1 | 40716 | 40916 |
| YP_009008900.1 | NC_023595_p3 | endodeoxyribonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 712 | 1047 |
| YP_009008932.1 | NC_023595_p39 | hypothetical protein | phrog_8996 | unknown function | unknown function | -1 | 28388 | 28606 |
| YP_009008929.1 | NC_023595_p42 | prim-pol domain protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 29485 | 30231 |
| YP_009008905.1 | NC_023595_p66 | hypothetical protein | phrog_10739 | tail length tape measure protein | tail | -1 | 39565 | 39924 |
| YP_009008888.1 | NC_023595_p15 | head-tail joining protein | phrog_78 | tail terminator | connector | 1 | 8008 | 8373 |
| YP_009008945.1 | NC_023595_p26 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 20736 | 20963 |
| YP_009008953.1 | NC_023595_p18 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 9779 | 14011 |
| YP_009008922.1 | NC_023595_p49 | hypothetical protein | phrog_11374 | unknown function | unknown function | -1 | 33019 | 33180 |
| YP_009008897.1 | NC_023595_p6 | hypothetical protein | phrog_8943 | unknown function | unknown function | 1 | 3491 | 3655 |
| YP_009008928.1 | NC_023595_p43 | hypothetical protein | phrog_11012 | unknown function | unknown function | -1 | 30244 | 30438 |