| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023602 |
Definition |
Mycobacterium phage 32HC, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Trigintaduovirus. |
DB of origin |
REFSEQ |
Length |
50781 |
Host Name |
Mycobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
65.73 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009009532.1 | NC_023602_p61 | hypothetical protein | phrog_34052 | unknown function | unknown function | 1 | 40419 | 40730 |
| YP_009009534.1 | NC_023602_p63 | hypothetical protein | phrog_31327 | unknown function | unknown function | 1 | 41116 | 41313 |
| YP_009009484.1 | NC_023602_p13 | capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 8256 | 9161 |
| YP_009009551.1 | NC_023602_p80 | hypothetical protein | phrog_10254 | unknown function | unknown function | 1 | 48410 | 48622 |
| YP_009009498.1 | NC_023602_p27 | hypothetical protein | phrog_13217 | minor tail protein | tail | 1 | 20718 | 21302 |
| YP_009009544.1 | NC_023602_p73 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 44576 | 45244 |
| YP_009009473.1 | NC_023602_p2 | hypothetical protein | phrog_37050 | unknown function | unknown function | 1 | 552 | 878 |
| YP_009009539.1 | NC_023602_p68 | hypothetical protein | phrog_25695 | unknown function | unknown function | 1 | 42882 | 43142 |
| YP_009009542.1 | NC_023602_p71 | RuvC | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 43501 | 44121 |
| YP_009009546.1 | NC_023602_p75 | hypothetical protein | phrog_18038 | unknown function | unknown function | 1 | 45654 | 46061 |
| YP_009009524.1 | NC_023602_p53 | DnaQ | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 36136 | 36690 |
| YP_009009474.1 | NC_023602_p3 | large terminase subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 878 | 2545 |
| YP_009009507.1 | NC_023602_p36 | lysin A | phrog_880 | endolysin | lysis | 1 | 27405 | 28772 |
| YP_009009516.1 | NC_023602_p45 | hypothetical protein | phrog_11565 | unknown function | unknown function | 1 | 31957 | 32148 |
| YP_009009550.1 | NC_023602_p79 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48021 | 48413 |
| YP_009009477.1 | NC_023602_p6 | hypothetical protein | phrog_4550 | unknown function | unknown function | -1 | 2994 | 3167 |
| YP_009009494.1 | NC_023602_p23 | hypothetical protein | phrog_10551 | tail assembly chaperone | tail | 1 | 13491 | 13799 |
| YP_009009514.1 | NC_023602_p43 | hypothetical protein | phrog_2540 | unknown function | unknown function | 1 | 31675 | 31836 |
| YP_009009497.1 | NC_023602_p26 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 18979 | 20718 |
| YP_009009543.1 | NC_023602_p72 | hypothetical protein | phrog_3193 | unknown function | unknown function | 1 | 44118 | 44579 |
| YP_009009506.1 | NC_023602_p35 | hypothetical protein | phrog_32139 | unknown function | unknown function | 1 | 27224 | 27364 |
| YP_009009483.1 | NC_023602_p12 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 7864 | 8238 |
| YP_009009528.1 | NC_023602_p57 | hypothetical protein | phrog_30582 | unknown function | unknown function | 1 | 39110 | 39319 |
| YP_009009503.1 | NC_023602_p32 | portal protein | phrog_240 | head protein | head and packaging | 1 | 26393 | 26737 |
| YP_009009495.1 | NC_023602_p24 | tapemeasure protein | phrog_9228 | tail length tape measure protein | tail | 1 | 13803 | 17879 |
| YP_009009549.1 | NC_023602_p78 | hypothetical protein | phrog_36677 | unknown function | unknown function | 1 | 46966 | 48024 |
| YP_009009476.1 | NC_023602_p5 | hypothetical protein | phrog_22760 | unknown function | unknown function | -1 | 2793 | 2990 |
| YP_009009556.1 | NC_023602_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50086 | 50292 |
| YP_009009491.1 | NC_023602_p20 | hypothetical protein | phrog_38214 | unknown function | unknown function | 1 | 12076 | 12336 |
| YP_009009527.1 | NC_023602_p56 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 38947 | 39105 |
| YP_009009504.1 | NC_023602_p33 | hypothetical protein | phrog_37805 | unknown function | unknown function | 1 | 26734 | 27081 |
| YP_009009548.1 | NC_023602_p77 | hypothetical protein | phrog_30954 | unknown function | unknown function | 1 | 46418 | 46966 |
| YP_009009488.1 | NC_023602_p17 | hypothetical protein | phrog_8079 | neck protein | connector | 1 | 10805 | 11047 |
| YP_009009501.1 | NC_023602_p30 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 24811 | 25137 |
| YP_009009552.1 | NC_023602_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48619 | 48849 |
| YP_009009485.1 | NC_023602_p14 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 9194 | 9727 |
| YP_009009515.1 | NC_023602_p44 | hypothetical protein | phrog_37063 | unknown function | unknown function | 1 | 31833 | 31940 |
| YP_009009496.1 | NC_023602_p25 | virion protein | phrog_106 | minor tail protein | tail | 1 | 17876 | 18982 |
| YP_009009541.1 | NC_023602_p70 | hypothetical protein | phrog_25679 | unknown function | unknown function | 1 | 43312 | 43500 |
| YP_009009518.1 | NC_023602_p47 | integrase | phrog_1 | integrase | integration and excision | -1 | 32656 | 33699 |
| YP_009009529.1 | NC_023602_p58 | hypothetical protein | phrog_8336 | unknown function | unknown function | 1 | 39342 | 39773 |
| YP_009009486.1 | NC_023602_p15 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 9730 | 10119 |
| YP_009009540.1 | NC_023602_p69 | hypothetical protein | phrog_37069 | unknown function | unknown function | 1 | 43139 | 43315 |
| YP_009009555.1 | NC_023602_p84 | hypothetical protein | phrog_34486 | unknown function | unknown function | 1 | 49858 | 50082 |
| YP_009009537.1 | NC_023602_p66 | hypothetical protein | phrog_22461 | unknown function | unknown function | 1 | 41723 | 41947 |
| YP_009009521.1 | NC_023602_p50 | hypothetical protein | phrog_35971 | unknown function | unknown function | 1 | 34449 | 34889 |
| YP_009009531.1 | NC_023602_p60 | hypothetical protein | phrog_28123 | unknown function | unknown function | 1 | 40186 | 40422 |
| YP_009009493.1 | NC_023602_p22 | hypothetical protein | phrog_15731 | tail assembly chaperone | tail | 1 | 12648 | 13490 |
| YP_009009511.1 | NC_023602_p40 | hypothetical protein | phrog_6071 | unknown function | unknown function | 1 | 30479 | 30703 |
| YP_009009554.1 | NC_023602_p83 | hypothetical protein | phrog_31434 | unknown function | unknown function | 1 | 49196 | 49861 |
| YP_009009505.1 | NC_023602_p34 | hypothetical protein | phrog_32616 | unknown function | unknown function | 1 | 27084 | 27224 |
| YP_009009557.1 | NC_023602_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50285 | 50668 |
| YP_009009512.1 | NC_023602_p41 | hypothetical protein | phrog_3798 | unknown function | unknown function | 1 | 30730 | 31161 |
| YP_009009520.1 | NC_023602_p49 | HTH binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34204 | 34452 |
| YP_009009553.1 | NC_023602_p82 | hypothetical protein | phrog_28080 | unknown function | unknown function | 1 | 48846 | 49196 |
| YP_009009535.1 | NC_023602_p64 | hypothetical protein | phrog_35884 | unknown function | unknown function | 1 | 41310 | 41540 |
| YP_009009508.1 | NC_023602_p37 | lysin B | phrog_102 | endolysin | lysis | 1 | 28787 | 29938 |
| YP_009009522.1 | NC_023602_p51 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 34909 | 35787 |
| YP_009009533.1 | NC_023602_p62 | hypothetical protein | phrog_18585 | unknown function | unknown function | 1 | 40727 | 41119 |
| YP_009009478.1 | NC_023602_p7 | HTH binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3172 | 3414 |
| YP_009009499.1 | NC_023602_p28 | virion protein | phrog_1565 | minor tail protein | tail | 1 | 21299 | 22384 |
| YP_009009487.1 | NC_023602_p16 | virion protein | phrog_18149 | head closure Hc1 | connector | 1 | 10119 | 10805 |
| YP_009009475.1 | NC_023602_p4 | hypothetical protein | phrog_29027 | unknown function | unknown function | -1 | 2599 | 2790 |
| YP_009009509.1 | NC_023602_p38 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 29968 | 30204 |
| YP_009009490.1 | NC_023602_p19 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 11470 | 12039 |
| YP_009009536.1 | NC_023602_p65 | hypothetical protein | phrog_26621 | unknown function | unknown function | 1 | 41541 | 41726 |
| YP_009009489.1 | NC_023602_p18 | hypothetical protein | phrog_6485 | tail terminator | connector | 1 | 11044 | 11448 |
| YP_009009523.1 | NC_023602_p52 | hypothetical protein | phrog_29600 | unknown function | unknown function | 1 | 35789 | 36139 |
| YP_009009545.1 | NC_023602_p74 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 45244 | 45657 |
| YP_009009525.1 | NC_023602_p54 | RecE like protein | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36687 | 37607 |
| YP_009009538.1 | NC_023602_p67 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 42023 | 42889 |
| YP_009009479.1 | NC_023602_p8 | hypothetical protein | phrog_30044 | unknown function | unknown function | -1 | 3420 | 3902 |
| YP_009009517.1 | NC_023602_p46 | hypothetical protein | phrog_30705 | unknown function | unknown function | -1 | 32135 | 32611 |
| YP_009009526.1 | NC_023602_p55 | RecT | phrog_2780 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 37634 | 38950 |
| YP_009009482.1 | NC_023602_p11 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 6497 | 7834 |
| YP_009009472.1 | NC_023602_p1 | small terminase subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 209 | 550 |
| YP_009009481.1 | NC_023602_p10 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 5045 | 6496 |
| YP_009009530.1 | NC_023602_p59 | hypothetical protein | phrog_11076 | unknown function | unknown function | 1 | 39773 | 40186 |
| YP_009009500.1 | NC_023602_p29 | hypothetical protein | phrog_3493 | minor tail protein | tail | 1 | 22389 | 24797 |
| YP_009009502.1 | NC_023602_p31 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 25140 | 26351 |
| YP_009009513.1 | NC_023602_p42 | virion protein | phrog_11690 | tail protein | tail | 1 | 31154 | 31678 |
| YP_009009510.1 | NC_023602_p39 | hypothetical protein | phrog_4511 | unknown function | unknown function | 1 | 30201 | 30482 |
| YP_009009492.1 | NC_023602_p21 | hypothetical protein | phrog_31419 | unknown function | unknown function | 1 | 12337 | 12540 |
| YP_009009480.1 | NC_023602_p9 | hypothetical protein | phrog_5436 | unknown function | unknown function | -1 | 3899 | 4702 |
| YP_009009547.1 | NC_023602_p76 | hypothetical protein | phrog_29920 | unknown function | unknown function | 1 | 46051 | 46386 |
| YP_009009519.1 | NC_023602_p48 | repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 33696 | 34073 |