Genomic map of Mycobacterium phage CRB1 (NC_023606)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023606
Definition
Mycobacterium phage CRB1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
52963
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.22
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009009743.1 NC_023606_p3 hypothetical protein phrog_4491 unknown function unknown function 1 2174 2470
YP_009009759.1 NC_023606_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 13923 14291
YP_009009784.1 NC_023606_p44 hypothetical protein phrog_896 unknown function unknown function -1 29736 29957
YP_009009790.1 NC_023606_p50 hypothetical protein phrog_690 unknown function unknown function -1 32778 32987
YP_009009803.1 NC_023606_p63 hypothetical protein phrog_1370 unknown function unknown function -1 40159 40293
YP_009009824.1 NC_023606_p84 hypothetical protein phrog_421 unknown function unknown function -1 47971 48729
YP_009009762.1 NC_023606_p22 major tail subunit phrog_117 major tail protein tail 1 15086 15673
YP_009009744.1 NC_023606_p4 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2473 2769
YP_009009827.1 NC_023606_p87 hypothetical protein phrog_2355 unknown function unknown function -1 49232 49600
YP_009009811.1 NC_023606_p71 hypothetical protein phrog_520 unknown function unknown function -1 43357 43596
YP_009009808.1 NC_023606_p68 HTH binding protein phrog_9069 unknown function unknown function -1 42088 42387
YP_009009818.1 NC_023606_p78 hypothetical protein phrog_4294 unknown function unknown function -1 46561 46719
YP_009009766.1 NC_023606_p26 minor tail subunit phrog_106 minor tail protein tail 1 19176 20186
YP_009009787.1 NC_023606_p47 hypothetical protein phrog_3812 unknown function unknown function -1 31977 32159
YP_009009771.1 NC_023606_p31 LSR2 protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 25014 25373
YP_009009792.1 NC_023606_p52 ThyX-like protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 33227 33955
YP_009009796.1 NC_023606_p56 hypothetical protein phrog_499 unknown function unknown function -1 36807 36989
YP_009009763.1 NC_023606_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15786 16615
YP_009009819.1 NC_023606_p79 hypothetical protein phrog_1178 unknown function unknown function -1 46719 47036
YP_009009786.1 NC_023606_p46 hypothetical protein phrog_4326 unknown function unknown function -1 31786 31980
YP_009009748.1 NC_023606_p8 lysin A phrog_317 endolysin lysis 1 4679 5974
YP_009009772.1 NC_023606_p32 hypothetical protein phrog_4480 unknown function unknown function 1 25366 25680
YP_009009831.1 NC_023606_p91 hypothetical protein phrog_6255 unknown function unknown function -1 50324 50569
YP_009009774.1 NC_023606_p34 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 26733 27314
YP_009009789.1 NC_023606_p49 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32359 32781
YP_009009764.1 NC_023606_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15786 16193
YP_009009826.1 NC_023606_p86 hypothetical protein phrog_3718 unknown function unknown function -1 48874 49179
YP_009009778.1 NC_023606_p38 hypothetical protein phrog_542 unknown function unknown function -1 28175 28360
YP_009009797.1 NC_023606_p57 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36983 37747
YP_009009750.1 NC_023606_p10 lysin B phrog_102 endolysin lysis 1 6408 7385
YP_009009834.1 NC_023606_p94 hypothetical protein phrog_1676 unknown function unknown function -1 51424 51714
YP_009009758.1 NC_023606_p18 hypothetical protein phrog_830 head-tail connector protein connector 1 13729 13926
YP_009009770.1 NC_023606_p30 minor tail subunit phrog_737 minor tail protein tail 1 22754 24937
YP_009009794.1 NC_023606_p54 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34571 36607
YP_009009829.1 NC_023606_p89 hypothetical protein phrog_519 unknown function unknown function -1 49966 50133
YP_009009767.1 NC_023606_p27 minor tail subunit phrog_110 minor tail protein tail 1 20183 21955
YP_009009769.1 NC_023606_p29 hypothetical protein phrog_404 minor tail protein tail 1 22412 22753
YP_009009752.1 NC_023606_p12 portal protein phrog_104 portal protein head and packaging 1 9194 10654
YP_009009801.1 NC_023606_p61 hypothetical protein phrog_2264 unknown function unknown function -1 39161 39238
YP_009009756.1 NC_023606_p16 hypothetical protein phrog_748 head-tail connector protein connector 1 13172 13351
YP_009009793.1 NC_023606_p53 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34032 34574
YP_009009742.1 NC_023606_p2 hypothetical protein phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1584 2177
YP_009009810.1 NC_023606_p70 hypothetical protein phrog_12205 unknown function unknown function -1 43232 43360
YP_009009775.1 NC_023606_p35 ParB phrog_2639 Arc-like repressor transcription regulation 1 27307 27597
YP_009009809.1 NC_023606_p69 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42415 43221
YP_009009751.1 NC_023606_p11 terminase phrog_9 terminase large subunit head and packaging 1 7407 9194
YP_009009757.1 NC_023606_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13355 13732
YP_009009830.1 NC_023606_p90 hypothetical protein phrog_1946 unknown function unknown function -1 50130 50324
YP_009009745.1 NC_023606_p5 terminase small subunit phrog_226 minor tail protein tail 1 2808 3278
YP_009009804.1 NC_023606_p64 EndoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40319 40792
YP_009009825.1 NC_023606_p85 hypothetical protein phrog_855 unknown function unknown function -1 48729 48863
YP_009009760.1 NC_023606_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14291 14626
YP_009009798.1 NC_023606_p58 hypothetical protein phrog_2436 unknown function unknown function -1 37744 37896
YP_009009761.1 NC_023606_p21 hypothetical protein phrog_123 tail terminator connector 1 14636 15067
YP_009009746.1 NC_023606_p6 structural protein phrog_1260 minor tail protein tail 1 3365 4330
YP_009009747.1 NC_023606_p7 hypothetical protein phrog_1087 unknown function unknown function 1 4521 4679
YP_009009788.1 NC_023606_p48 hypothetical protein phrog_11816 unknown function unknown function -1 32159 32359
YP_009009814.1 NC_023606_p74 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44061 44957
YP_009009805.1 NC_023606_p65 hypothetical protein phrog_2187 unknown function unknown function -1 40758 40877
YP_009009833.1 NC_023606_p93 hypothetical protein phrog_1445 unknown function unknown function -1 51319 51399
YP_009009817.1 NC_023606_p77 hypothetical protein phrog_1173 unknown function unknown function -1 46245 46424
YP_009009812.1 NC_023606_p72 hypothetical protein phrog_666 unknown function unknown function -1 43625 43819
YP_009009807.1 NC_023606_p67 hypothetical protein phrog_397 unknown function unknown function -1 41710 41940
YP_009009806.1 NC_023606_p66 esterase/lipase phrog_789 esterase/lipase other -1 40877 41713
YP_009009802.1 NC_023606_p62 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39238 39723
YP_009009781.1 NC_023606_p41 hypothetical protein phrog_2099 unknown function unknown function -1 28953 29225
YP_009009821.1 NC_023606_p81 hypothetical protein phrog_3351 unknown function unknown function -1 47296 47523
YP_009009822.1 NC_023606_p82 hypothetical protein phrog_1477 unknown function unknown function -1 47532 47654
YP_009009795.1 NC_023606_p55 hypothetical protein phrog_2046 unknown function unknown function -1 36607 36810
YP_009009800.1 NC_023606_p60 hypothetical protein phrog_1167 phosphofructokinase other -1 38667 39164
YP_009009768.1 NC_023606_p28 hypothetical protein phrog_352 minor tail protein tail 1 21972 22415
YP_009009773.1 NC_023606_p33 Rep protein phrog_35571 DNA binding protein DNA, RNA and nucleotide metabolism -1 25683 26567
YP_009009749.1 NC_023606_p9 holin phrog_526 holin lysis 1 5971 6411
YP_009009823.1 NC_023606_p83 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47651 47974
YP_009009780.1 NC_023606_p40 hypothetical protein phrog_383 unknown function unknown function -1 28586 28960
YP_009009813.1 NC_023606_p73 hypothetical protein phrog_642 unknown function unknown function -1 43816 44013
YP_009009782.1 NC_023606_p42 hypothetical protein phrog_3771 unknown function unknown function -1 29222 29506
YP_009009779.1 NC_023606_p39 hypothetical protein phrog_980 unknown function unknown function -1 28357 28593
YP_009009816.1 NC_023606_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45430 46002
YP_009009828.1 NC_023606_p88 hypothetical protein phrog_586 unknown function unknown function -1 49622 49969
YP_009009755.1 NC_023606_p15 major capsid protein phrog_10 major head protein head and packaging 1 12145 13101
YP_009009783.1 NC_023606_p43 hypothetical protein phrog_3283 unknown function unknown function -1 29506 29736
YP_009009791.1 NC_023606_p51 hypothetical protein phrog_1454 unknown function unknown function -1 32989 33225
YP_009009785.1 NC_023606_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 29991 31778
YP_009009754.1 NC_023606_p14 scaffold protein phrog_233 head scaffolding protein head and packaging 1 11588 12115
YP_009009815.1 NC_023606_p75 hypothetical protein phrog_1562 unknown function unknown function -1 44954 45367
YP_009009741.1 NC_023606_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 577 1338
YP_009009753.1 NC_023606_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10684 11535
YP_009009765.1 NC_023606_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 16605 19142
YP_009009799.1 NC_023606_p59 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37900 38670
YP_009009832.1 NC_023606_p92 hypothetical protein phrog_1392 unknown function unknown function -1 50578 51288
YP_009009776.1 NC_023606_p36 hypothetical protein phrog_6992 unknown function unknown function -1 27781 27951
YP_009009820.1 NC_023606_p80 hypothetical protein phrog_1875 unknown function unknown function -1 47039 47299
YP_009009777.1 NC_023606_p37 hypothetical protein phrog_13926 unknown function unknown function -1 27948 28166