| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023606 |
Definition |
Mycobacterium phage CRB1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
52963 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
94 |
%GC |
63.22 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009009743.1 | NC_023606_p3 | hypothetical protein | phrog_4491 | unknown function | unknown function | 1 | 2174 | 2470 |
| YP_009009759.1 | NC_023606_p19 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13923 | 14291 |
| YP_009009784.1 | NC_023606_p44 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 29736 | 29957 |
| YP_009009790.1 | NC_023606_p50 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32778 | 32987 |
| YP_009009803.1 | NC_023606_p63 | hypothetical protein | phrog_1370 | unknown function | unknown function | -1 | 40159 | 40293 |
| YP_009009824.1 | NC_023606_p84 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 47971 | 48729 |
| YP_009009762.1 | NC_023606_p22 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 15086 | 15673 |
| YP_009009744.1 | NC_023606_p4 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2473 | 2769 |
| YP_009009827.1 | NC_023606_p87 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 49232 | 49600 |
| YP_009009811.1 | NC_023606_p71 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43357 | 43596 |
| YP_009009808.1 | NC_023606_p68 | HTH binding protein | phrog_9069 | unknown function | unknown function | -1 | 42088 | 42387 |
| YP_009009818.1 | NC_023606_p78 | hypothetical protein | phrog_4294 | unknown function | unknown function | -1 | 46561 | 46719 |
| YP_009009766.1 | NC_023606_p26 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 19176 | 20186 |
| YP_009009787.1 | NC_023606_p47 | hypothetical protein | phrog_3812 | unknown function | unknown function | -1 | 31977 | 32159 |
| YP_009009771.1 | NC_023606_p31 | LSR2 protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | 1 | 25014 | 25373 |
| YP_009009792.1 | NC_023606_p52 | ThyX-like protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 33227 | 33955 |
| YP_009009796.1 | NC_023606_p56 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36807 | 36989 |
| YP_009009763.1 | NC_023606_p23 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15786 | 16615 |
| YP_009009819.1 | NC_023606_p79 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 46719 | 47036 |
| YP_009009786.1 | NC_023606_p46 | hypothetical protein | phrog_4326 | unknown function | unknown function | -1 | 31786 | 31980 |
| YP_009009748.1 | NC_023606_p8 | lysin A | phrog_317 | endolysin | lysis | 1 | 4679 | 5974 |
| YP_009009772.1 | NC_023606_p32 | hypothetical protein | phrog_4480 | unknown function | unknown function | 1 | 25366 | 25680 |
| YP_009009831.1 | NC_023606_p91 | hypothetical protein | phrog_6255 | unknown function | unknown function | -1 | 50324 | 50569 |
| YP_009009774.1 | NC_023606_p34 | ParA | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 26733 | 27314 |
| YP_009009789.1 | NC_023606_p49 | HTH DNA binding protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32359 | 32781 |
| YP_009009764.1 | NC_023606_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15786 | 16193 |
| YP_009009826.1 | NC_023606_p86 | hypothetical protein | phrog_3718 | unknown function | unknown function | -1 | 48874 | 49179 |
| YP_009009778.1 | NC_023606_p38 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 28175 | 28360 |
| YP_009009797.1 | NC_023606_p57 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36983 | 37747 |
| YP_009009750.1 | NC_023606_p10 | lysin B | phrog_102 | endolysin | lysis | 1 | 6408 | 7385 |
| YP_009009834.1 | NC_023606_p94 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51424 | 51714 |
| YP_009009758.1 | NC_023606_p18 | hypothetical protein | phrog_830 | head-tail connector protein | connector | 1 | 13729 | 13926 |
| YP_009009770.1 | NC_023606_p30 | minor tail subunit | phrog_737 | minor tail protein | tail | 1 | 22754 | 24937 |
| YP_009009794.1 | NC_023606_p54 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 34571 | 36607 |
| YP_009009829.1 | NC_023606_p89 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 49966 | 50133 |
| YP_009009767.1 | NC_023606_p27 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 20183 | 21955 |
| YP_009009769.1 | NC_023606_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 22412 | 22753 |
| YP_009009752.1 | NC_023606_p12 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9194 | 10654 |
| YP_009009801.1 | NC_023606_p61 | hypothetical protein | phrog_2264 | unknown function | unknown function | -1 | 39161 | 39238 |
| YP_009009756.1 | NC_023606_p16 | hypothetical protein | phrog_748 | head-tail connector protein | connector | 1 | 13172 | 13351 |
| YP_009009793.1 | NC_023606_p53 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 34032 | 34574 |
| YP_009009742.1 | NC_023606_p2 | hypothetical protein | phrog_3895 | ADP-ribosyltransferase exoenzyme toxin | moron, auxiliary metabolic gene and host takeover | 1 | 1584 | 2177 |
| YP_009009810.1 | NC_023606_p70 | hypothetical protein | phrog_12205 | unknown function | unknown function | -1 | 43232 | 43360 |
| YP_009009775.1 | NC_023606_p35 | ParB | phrog_2639 | Arc-like repressor | transcription regulation | 1 | 27307 | 27597 |
| YP_009009809.1 | NC_023606_p69 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42415 | 43221 |
| YP_009009751.1 | NC_023606_p11 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7407 | 9194 |
| YP_009009757.1 | NC_023606_p17 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13355 | 13732 |
| YP_009009830.1 | NC_023606_p90 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 50130 | 50324 |
| YP_009009745.1 | NC_023606_p5 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 2808 | 3278 |
| YP_009009804.1 | NC_023606_p64 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 40319 | 40792 |
| YP_009009825.1 | NC_023606_p85 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 48729 | 48863 |
| YP_009009760.1 | NC_023606_p20 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14291 | 14626 |
| YP_009009798.1 | NC_023606_p58 | hypothetical protein | phrog_2436 | unknown function | unknown function | -1 | 37744 | 37896 |
| YP_009009761.1 | NC_023606_p21 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14636 | 15067 |
| YP_009009746.1 | NC_023606_p6 | structural protein | phrog_1260 | minor tail protein | tail | 1 | 3365 | 4330 |
| YP_009009747.1 | NC_023606_p7 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 4521 | 4679 |
| YP_009009788.1 | NC_023606_p48 | hypothetical protein | phrog_11816 | unknown function | unknown function | -1 | 32159 | 32359 |
| YP_009009814.1 | NC_023606_p74 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44061 | 44957 |
| YP_009009805.1 | NC_023606_p65 | hypothetical protein | phrog_2187 | unknown function | unknown function | -1 | 40758 | 40877 |
| YP_009009833.1 | NC_023606_p93 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51319 | 51399 |
| YP_009009817.1 | NC_023606_p77 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 46245 | 46424 |
| YP_009009812.1 | NC_023606_p72 | hypothetical protein | phrog_666 | unknown function | unknown function | -1 | 43625 | 43819 |
| YP_009009807.1 | NC_023606_p67 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41710 | 41940 |
| YP_009009806.1 | NC_023606_p66 | esterase/lipase | phrog_789 | esterase/lipase | other | -1 | 40877 | 41713 |
| YP_009009802.1 | NC_023606_p62 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39238 | 39723 |
| YP_009009781.1 | NC_023606_p41 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 28953 | 29225 |
| YP_009009821.1 | NC_023606_p81 | hypothetical protein | phrog_3351 | unknown function | unknown function | -1 | 47296 | 47523 |
| YP_009009822.1 | NC_023606_p82 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 47532 | 47654 |
| YP_009009795.1 | NC_023606_p55 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 36607 | 36810 |
| YP_009009800.1 | NC_023606_p60 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 38667 | 39164 |
| YP_009009768.1 | NC_023606_p28 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 21972 | 22415 |
| YP_009009773.1 | NC_023606_p33 | Rep protein | phrog_35571 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25683 | 26567 |
| YP_009009749.1 | NC_023606_p9 | holin | phrog_526 | holin | lysis | 1 | 5971 | 6411 |
| YP_009009823.1 | NC_023606_p83 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47651 | 47974 |
| YP_009009780.1 | NC_023606_p40 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 28586 | 28960 |
| YP_009009813.1 | NC_023606_p73 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 43816 | 44013 |
| YP_009009782.1 | NC_023606_p42 | hypothetical protein | phrog_3771 | unknown function | unknown function | -1 | 29222 | 29506 |
| YP_009009779.1 | NC_023606_p39 | hypothetical protein | phrog_980 | unknown function | unknown function | -1 | 28357 | 28593 |
| YP_009009816.1 | NC_023606_p76 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 45430 | 46002 |
| YP_009009828.1 | NC_023606_p88 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 49622 | 49969 |
| YP_009009755.1 | NC_023606_p15 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12145 | 13101 |
| YP_009009783.1 | NC_023606_p43 | hypothetical protein | phrog_3283 | unknown function | unknown function | -1 | 29506 | 29736 |
| YP_009009791.1 | NC_023606_p51 | hypothetical protein | phrog_1454 | unknown function | unknown function | -1 | 32989 | 33225 |
| YP_009009785.1 | NC_023606_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29991 | 31778 |
| YP_009009754.1 | NC_023606_p14 | scaffold protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11588 | 12115 |
| YP_009009815.1 | NC_023606_p75 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44954 | 45367 |
| YP_009009741.1 | NC_023606_p1 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 577 | 1338 |
| YP_009009753.1 | NC_023606_p13 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10684 | 11535 |
| YP_009009765.1 | NC_023606_p25 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16605 | 19142 |
| YP_009009799.1 | NC_023606_p59 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37900 | 38670 |
| YP_009009832.1 | NC_023606_p92 | hypothetical protein | phrog_1392 | unknown function | unknown function | -1 | 50578 | 51288 |
| YP_009009776.1 | NC_023606_p36 | hypothetical protein | phrog_6992 | unknown function | unknown function | -1 | 27781 | 27951 |
| YP_009009820.1 | NC_023606_p80 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 47039 | 47299 |
| YP_009009777.1 | NC_023606_p37 | hypothetical protein | phrog_13926 | unknown function | unknown function | -1 | 27948 | 28166 |