Genomic map of Mycobacterium phage 40AC (NC_023607)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023607
Definition
Mycobacterium phage 40AC, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
REFSEQ
Length
53396
Host Name
Mycobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
63.33
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009009883.1 NC_023607_p49 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 33652 34380
YP_009009909.1 NC_023607_p75 hypothetical protein phrog_5531 unknown function unknown function -1 46469 46678
YP_009009859.1 NC_023607_p25 hypothetical protein phrog_123 tail terminator connector 1 16677 17117
YP_009009852.1 NC_023607_p18 scaffold protein phrog_233 head scaffolding protein head and packaging 1 13636 14160
YP_009009864.1 NC_023607_p30 minor tail subunit phrog_106 minor tail protein tail 1 21412 22422
YP_009009857.1 NC_023607_p23 hypothetical protein phrog_320 head closure Hc1 connector 1 15977 16345
YP_009009869.1 NC_023607_p35 hypothetical protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 26822 27181
YP_009009839.1 NC_023607_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2296 2592
YP_009009910.1 NC_023607_p76 hypothetical protein phrog_1477 unknown function unknown function -1 46687 46818
YP_009009919.1 NC_023607_p85 hypothetical protein phrog_1946 unknown function unknown function -1 50089 50289
YP_009009891.1 NC_023607_p57 hypothetical protein phrog_474 phosphofructokinase other -1 38960 39262
YP_009009877.1 NC_023607_p43 hypothetical protein phrog_2099 unknown function unknown function -1 30202 30498
YP_009009853.1 NC_023607_p19 capsid protein phrog_10 major head protein head and packaging 1 14194 15159
YP_009009881.1 NC_023607_p47 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 33055 33450
YP_009009906.1 NC_023607_p72 hypothetical protein phrog_1562 unknown function unknown function -1 44878 45297
YP_009009880.1 NC_023607_p46 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30977 33055
YP_009009899.1 NC_023607_p65 hypothetical protein phrog_397 unknown function unknown function -1 42059 42289
YP_009009916.1 NC_023607_p82 hypothetical protein phrog_1008 DNA methyltransferase other -1 48499 49035
YP_009009924.1 NC_023607_p90 hypothetical protein phrog_1676 unknown function unknown function -1 51862 52143
YP_009009921.1 NC_023607_p87 hypothetical protein phrog_2124 unknown function unknown function -1 50485 50616
YP_009009843.1 NC_023607_p9 hypothetical protein phrog_356 minor tail protein tail 1 5287 5973
YP_009009892.1 NC_023607_p58 hypothetical protein phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 39259 39531
YP_009009894.1 NC_023607_p60 hypothetical protein phrog_1370 unknown function unknown function -1 40382 40519
YP_009009863.1 NC_023607_p29 tape measure protein phrog_305 tail length tape measure protein tail 1 18647 21385
YP_009009879.1 NC_023607_p45 hypothetical protein phrog_896 unknown function unknown function -1 30725 30946
YP_009009854.1 NC_023607_p20 hypothetical protein phrog_748 head-tail connector protein connector 1 15229 15408
YP_009009884.1 NC_023607_p50 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34445 34942
YP_009009845.1 NC_023607_p11 hypothetical protein phrog_1087 unknown function unknown function 1 6438 6575
YP_009009873.1 NC_023607_p39 hypothetical protein phrog_38291 unknown function unknown function 1 28962 29216
YP_009009846.1 NC_023607_p12 lysin A phrog_317 endolysin lysis 1 6575 8080
YP_009009888.1 NC_023607_p54 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 37369 38040
YP_009009882.1 NC_023607_p48 hypothetical protein phrog_690 unknown function unknown function -1 33450 33650
YP_009009840.1 NC_023607_p6 terminase small subunit phrog_226 minor tail protein tail 1 2633 3097
YP_009009866.1 NC_023607_p32 hypothetical protein phrog_352 minor tail protein tail 1 24208 24654
YP_009009841.1 NC_023607_p7 structural protein phrog_1260 minor tail protein tail 1 3190 4152
YP_009009836.1 NC_023607_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 502 1272
YP_009009911.1 NC_023607_p77 RDF protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46806 47105
YP_009009905.1 NC_023607_p71 RecB-like protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44066 44881
YP_009009897.1 NC_023607_p63 esterase/lipase protein phrog_789 esterase/lipase other -1 41086 41931
YP_009009842.1 NC_023607_p8 hypothetical protein phrog_819 tail protein tail 1 4152 5285
YP_009009860.1 NC_023607_p26 tail protein phrog_117 major tail protein tail 1 17135 17728
YP_009009858.1 NC_023607_p24 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 16345 16680
YP_009009861.1 NC_023607_p27 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17840 18669
YP_009009867.1 NC_023607_p33 hypothetical protein phrog_404 minor tail protein tail 1 24651 24977
YP_009009889.1 NC_023607_p55 hypothetical protein phrog_2436 unknown function unknown function -1 38037 38189
YP_009009871.1 NC_023607_p37 hypothetical protein singleton unknown function unknown function -1 27587 27901
YP_009009874.1 NC_023607_p40 hypothetical protein phrog_1712 unknown function unknown function 1 29229 29498
YP_009009904.1 NC_023607_p70 hypothetical protein phrog_642 unknown function unknown function -1 43796 44020
YP_009009848.1 NC_023607_p14 lysin B phrog_102 endolysin lysis 1 8493 9470
YP_009009850.1 NC_023607_p16 portal protein phrog_104 portal protein head and packaging 1 11241 12704
YP_009009868.1 NC_023607_p34 structural protein phrog_737 minor tail protein tail 1 24978 26762
YP_009009914.1 NC_023607_p80 hypothetical protein phrog_855 unknown function unknown function -1 48139 48267
YP_009009885.1 NC_023607_p51 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34954 36996
YP_009009872.1 NC_023607_p38 ParA phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 28399 28962
YP_009009851.1 NC_023607_p17 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12761 13585
YP_009009895.1 NC_023607_p61 endonuclease VII protein phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40516 41010
YP_009009844.1 NC_023607_p10 hypothetical protein phrog_2269 unknown function unknown function 1 5981 6208
YP_009009898.1 NC_023607_p64 hypothetical protein phrog_13419 unknown function unknown function -1 41922 42062
YP_009009856.1 NC_023607_p22 hypothetical protein phrog_830 head-tail connector protein connector 1 15786 15977
YP_009009865.1 NC_023607_p31 minor tail subunit phrog_110 minor tail protein tail 1 22419 24191
YP_009009890.1 NC_023607_p56 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 38193 38963
YP_009009878.1 NC_023607_p44 hypothetical protein phrog_3283 unknown function unknown function -1 30495 30725
YP_009009917.1 NC_023607_p83 hypothetical protein phrog_363 DNA methyltransferase other -1 49076 49609
YP_009009886.1 NC_023607_p52 hypothetical protein phrog_2046 unknown function unknown function -1 36996 37199
YP_009009838.1 NC_023607_p4 hypothetical protein phrog_4347 unknown function unknown function 1 2081 2299
YP_009009870.1 NC_023607_p36 hypothetical protein phrog_4480 unknown function unknown function 1 27174 27485
YP_009009835.1 NC_023607_p1 hypothetical protein singleton unknown function unknown function 1 130 288
YP_009009915.1 NC_023607_p81 hypothetical protein phrog_828 unknown function unknown function -1 48276 48479
YP_009009908.1 NC_023607_p74 hypothetical protein singleton unknown function unknown function -1 46195 46380
YP_009009876.1 NC_023607_p42 hypothetical protein phrog_383 unknown function unknown function -1 29822 30205
YP_009009875.1 NC_023607_p41 hypothetical protein phrog_542 unknown function unknown function -1 29652 29813
YP_009009923.1 NC_023607_p89 hypothetical protein phrog_1617 unknown function unknown function -1 50846 51721
YP_009009907.1 NC_023607_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45359 45910
YP_009009901.1 NC_023607_p67 hypothetical protein phrog_2660 unknown function unknown function -1 43121 43390
YP_009009887.1 NC_023607_p53 hypothetical protein phrog_499 unknown function unknown function -1 37196 37369
YP_009009912.1 NC_023607_p78 hypothetical protein phrog_421 unknown function unknown function -1 47102 47860
YP_009009849.1 NC_023607_p15 terminase large subunit phrog_9 terminase large subunit head and packaging 1 9493 11244
YP_009009847.1 NC_023607_p13 holin phrog_526 holin lysis 1 8077 8496
YP_009009922.1 NC_023607_p88 hypothetical protein phrog_3831 unknown function unknown function -1 50618 50824
YP_009009862.1 NC_023607_p28 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17840 18241
YP_009009918.1 NC_023607_p84 hypothetical protein phrog_586 unknown function unknown function -1 49629 50012
YP_009009920.1 NC_023607_p86 hypothetical protein phrog_519 unknown function unknown function -1 50289 50474
YP_009009902.1 NC_023607_p68 hypothetical protein phrog_12205 unknown function unknown function -1 43401 43526
YP_009009900.1 NC_023607_p66 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42316 43059
YP_009009896.1 NC_023607_p62 hypothetical protein phrog_2187 unknown function unknown function -1 40973 41089
YP_009009903.1 NC_023607_p69 hypothetical protein phrog_520 unknown function unknown function -1 43523 43765
YP_009009837.1 NC_023607_p3 hypothetical protein phrog_4415 peptidase other 1 1491 2084
YP_009009893.1 NC_023607_p59 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39528 40016
YP_009009855.1 NC_023607_p21 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 15412 15789
YP_009009913.1 NC_023607_p79 hypothetical protein singleton unknown function unknown function -1 47936 48139