Genomic map of Salmonella phage vB_SenS-Ent2 (NC_023608)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023608
Definition
Salmonella phage vB_SenS-Ent2 complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus.
DB of origin
REFSEQ
Length
42093
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
49.91
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009009965.1 NC_023608_p41 hypothetical protein phrog_3127 unknown function unknown function -1 33931 34461
YP_009009945.1 NC_023608_p21 hypothetical protein phrog_2452 unknown function unknown function -1 13607 13837
YP_009009946.1 NC_023608_p22 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 13847 14347
YP_009009940.1 NC_023608_p16 head-tail joining protein phrog_161 head closure Hc1 connector 1 10456 10815
YP_009009943.1 NC_023608_p19 major tail protein phrog_290 minor tail protein tail 1 11626 12795
YP_009009936.1 NC_023608_p12 Hoc protein phrog_4069 Hoc-like head decoration head and packaging 1 8760 9110
YP_009009935.1 NC_023608_p11 head fibre protein phrog_1954 virion structural protein head and packaging 1 8377 8748
YP_009009973.1 NC_023608_p49 hypothetical protein phrog_2359 holin lysis 1 39569 39850
YP_009009968.1 NC_023608_p44 uvsX-like protein phrog_5169 unknown function unknown function -1 37071 37304
YP_009009958.1 NC_023608_p34 intein containing helicase precursor phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 25365 27830
YP_009009929.1 NC_023608_p5 head morphogenesis protein, SPP1family phrog_241 head morphogenesis head and packaging 1 4161 5204
YP_009009934.1 NC_023608_p10 major coat protein phrog_247 major head protein head and packaging 1 7268 8317
YP_009009975.1 NC_023608_p51 lysozyme phrog_7 endolysin lysis 1 40120 40608
YP_009009960.1 NC_023608_p36 Holliday junction resolvase phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 28050 28337
YP_009009957.1 NC_023608_p33 hypothetical protein phrog_13851 unknown function unknown function -1 25147 25368
YP_009009970.1 NC_023608_p46 hypothetical protein phrog_3766 unknown function unknown function 1 38478 38681
YP_009009963.1 NC_023608_p39 hypothetical protein phrog_13603 unknown function unknown function -1 32288 32464
YP_009009974.1 NC_023608_p50 holin, class II phrog_2508 holin lysis 1 39852 40139
YP_009009941.1 NC_023608_p17 structural protein phrog_169 tail completion or Neck1 protein connector 1 10812 11207
YP_009009962.1 NC_023608_p38 ssDNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31580 32206
YP_009009954.1 NC_023608_p30 hypothetical protein phrog_329 minor tail protein tail 1 20047 20412
YP_009009937.1 NC_023608_p13 hypothetical protein phrog_4451 unknown function unknown function 1 9147 9335
YP_009009948.1 NC_023608_p24 imm immunity to superinfection protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover -1 15580 15759
YP_009009950.1 NC_023608_p26 hypothetical protein phrog_4557 unknown function unknown function 1 16351 16710
YP_009009925.1 NC_023608_p1 phage terminase, small subunit phrog_3064 terminase head and packaging 1 66 572
YP_009009930.1 NC_023608_p6 head decoration protein phrog_3945 Hoc-like head decoration head and packaging 1 5207 5665
YP_009009972.1 NC_023608_p48 hypothetical protein phrog_1040 peptidase HslV family other 1 39055 39489
YP_009009964.1 NC_023608_p40 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 32464 33888
YP_009009955.1 NC_023608_p31 tail fibre protein phrog_469 tail protein tail 1 20403 22961
YP_009009966.1 NC_023608_p42 DNA-binding protein phrog_3 transcriptional repressor transcription regulation 1 34595 34813
YP_009009947.1 NC_023608_p23 serine/theonine protein phosphatase phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 14363 15517
YP_009009932.1 NC_023608_p8 hypothetical protein phrog_5672 Rz-like spanin lysis 1 6332 6478
YP_009009980.1 NC_023608_p56 hypothetical protein phrog_10134 unknown function unknown function 1 41795 42025
YP_009009931.1 NC_023608_p7 hypothetical protein phrog_2536 Rz-like spanin lysis 1 5983 6369
YP_009009967.1 NC_023608_p43 phage replicative helicase-primase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism -1 34828 37014
YP_009009959.1 NC_023608_p35 hypothetical protein phrog_4879 unknown function unknown function -1 27827 28018
YP_009009939.1 NC_023608_p15 hypothetical protein phrog_3614 unknown function unknown function 1 9851 10456
YP_009009952.1 NC_023608_p28 hypothetical protein phrog_384 virion structural protein head and packaging 1 19095 19538
YP_009009979.1 NC_023608_p55 hypothetical protein phrog_2531 unknown function unknown function 1 41482 41781
YP_009009971.1 NC_023608_p47 hypothetical protein phrog_4947 unknown function unknown function 1 38684 39049
YP_009009944.1 NC_023608_p20 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation -1 12824 13495
YP_009009978.1 NC_023608_p54 hypothetical protein phrog_268 unknown function unknown function 1 41129 41485
YP_009009927.1 NC_023608_p3 portal protein phrog_145 portal protein head and packaging 1 1846 3315
YP_009009953.1 NC_023608_p29 hypothetical protein phrog_396 minor tail protein tail 1 19535 20050
YP_009009961.1 NC_023608_p37 intein containing DNA polymerase precursor phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28424 31522
YP_009009976.1 NC_023608_p52 hypothetical protein phrog_2180 unknown function unknown function 1 40795 40980
YP_009009977.1 NC_023608_p53 hypothetical protein phrog_4684 unknown function unknown function 1 40977 41132
YP_009009938.1 NC_023608_p14 head-tail joining protein phrog_477 head-tail adaptor Ad1 connector 1 9339 9848
YP_009009951.1 NC_023608_p27 tape measure protein phrog_1538 tail length tape measure protein tail 1 16703 19036
YP_009009928.1 NC_023608_p4 hypothetical protein phrog_6095 amidase lysis -1 3345 3995
YP_009009949.1 NC_023608_p25 hypothetical protein phrog_313 Tail assembly chaperone tail 1 15929 16345
YP_009009942.1 NC_023608_p18 structural protein phrog_179 tail terminator connector 1 11207 11626
YP_009009926.1 NC_023608_p2 phage terminase, large subunit phrog_2 terminase large subunit head and packaging 1 562 1833
YP_009009956.1 NC_023608_p32 tailspike protein phrog_1819 tail spike protein tail 1 22974 25028
YP_009009969.1 NC_023608_p45 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision -1 37301 37471
YP_009009933.1 NC_023608_p9 scaffold protein phrog_206 head scaffolding protein head and packaging 1 6563 7264