| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023608 |
Definition |
Salmonella phage vB_SenS-Ent2 complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus. |
DB of origin |
REFSEQ |
Length |
42093 |
Host Name |
Salmonella enterica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
56 |
%GC |
49.91 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009009965.1 | NC_023608_p41 | hypothetical protein | phrog_3127 | unknown function | unknown function | -1 | 33931 | 34461 |
| YP_009009945.1 | NC_023608_p21 | hypothetical protein | phrog_2452 | unknown function | unknown function | -1 | 13607 | 13837 |
| YP_009009946.1 | NC_023608_p22 | HNH endonuclease | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 13847 | 14347 |
| YP_009009940.1 | NC_023608_p16 | head-tail joining protein | phrog_161 | head closure Hc1 | connector | 1 | 10456 | 10815 |
| YP_009009943.1 | NC_023608_p19 | major tail protein | phrog_290 | minor tail protein | tail | 1 | 11626 | 12795 |
| YP_009009936.1 | NC_023608_p12 | Hoc protein | phrog_4069 | Hoc-like head decoration | head and packaging | 1 | 8760 | 9110 |
| YP_009009935.1 | NC_023608_p11 | head fibre protein | phrog_1954 | virion structural protein | head and packaging | 1 | 8377 | 8748 |
| YP_009009973.1 | NC_023608_p49 | hypothetical protein | phrog_2359 | holin | lysis | 1 | 39569 | 39850 |
| YP_009009968.1 | NC_023608_p44 | uvsX-like protein | phrog_5169 | unknown function | unknown function | -1 | 37071 | 37304 |
| YP_009009958.1 | NC_023608_p34 | intein containing helicase precursor | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 25365 | 27830 |
| YP_009009929.1 | NC_023608_p5 | head morphogenesis protein, SPP1family | phrog_241 | head morphogenesis | head and packaging | 1 | 4161 | 5204 |
| YP_009009934.1 | NC_023608_p10 | major coat protein | phrog_247 | major head protein | head and packaging | 1 | 7268 | 8317 |
| YP_009009975.1 | NC_023608_p51 | lysozyme | phrog_7 | endolysin | lysis | 1 | 40120 | 40608 |
| YP_009009960.1 | NC_023608_p36 | Holliday junction resolvase | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28050 | 28337 |
| YP_009009957.1 | NC_023608_p33 | hypothetical protein | phrog_13851 | unknown function | unknown function | -1 | 25147 | 25368 |
| YP_009009970.1 | NC_023608_p46 | hypothetical protein | phrog_3766 | unknown function | unknown function | 1 | 38478 | 38681 |
| YP_009009963.1 | NC_023608_p39 | hypothetical protein | phrog_13603 | unknown function | unknown function | -1 | 32288 | 32464 |
| YP_009009974.1 | NC_023608_p50 | holin, class II | phrog_2508 | holin | lysis | 1 | 39852 | 40139 |
| YP_009009941.1 | NC_023608_p17 | structural protein | phrog_169 | tail completion or Neck1 protein | connector | 1 | 10812 | 11207 |
| YP_009009962.1 | NC_023608_p38 | ssDNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 31580 | 32206 |
| YP_009009954.1 | NC_023608_p30 | hypothetical protein | phrog_329 | minor tail protein | tail | 1 | 20047 | 20412 |
| YP_009009937.1 | NC_023608_p13 | hypothetical protein | phrog_4451 | unknown function | unknown function | 1 | 9147 | 9335 |
| YP_009009948.1 | NC_023608_p24 | imm immunity to superinfection protein | phrog_1039 | immunity to superinfection | moron, auxiliary metabolic gene and host takeover | -1 | 15580 | 15759 |
| YP_009009950.1 | NC_023608_p26 | hypothetical protein | phrog_4557 | unknown function | unknown function | 1 | 16351 | 16710 |
| YP_009009925.1 | NC_023608_p1 | phage terminase, small subunit | phrog_3064 | terminase | head and packaging | 1 | 66 | 572 |
| YP_009009930.1 | NC_023608_p6 | head decoration protein | phrog_3945 | Hoc-like head decoration | head and packaging | 1 | 5207 | 5665 |
| YP_009009972.1 | NC_023608_p48 | hypothetical protein | phrog_1040 | peptidase HslV family | other | 1 | 39055 | 39489 |
| YP_009009964.1 | NC_023608_p40 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 32464 | 33888 |
| YP_009009955.1 | NC_023608_p31 | tail fibre protein | phrog_469 | tail protein | tail | 1 | 20403 | 22961 |
| YP_009009966.1 | NC_023608_p42 | DNA-binding protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34595 | 34813 |
| YP_009009947.1 | NC_023608_p23 | serine/theonine protein phosphatase | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 14363 | 15517 |
| YP_009009932.1 | NC_023608_p8 | hypothetical protein | phrog_5672 | Rz-like spanin | lysis | 1 | 6332 | 6478 |
| YP_009009980.1 | NC_023608_p56 | hypothetical protein | phrog_10134 | unknown function | unknown function | 1 | 41795 | 42025 |
| YP_009009931.1 | NC_023608_p7 | hypothetical protein | phrog_2536 | Rz-like spanin | lysis | 1 | 5983 | 6369 |
| YP_009009967.1 | NC_023608_p43 | phage replicative helicase-primase | phrog_3228 | replicative helicase-primase | DNA, RNA and nucleotide metabolism | -1 | 34828 | 37014 |
| YP_009009959.1 | NC_023608_p35 | hypothetical protein | phrog_4879 | unknown function | unknown function | -1 | 27827 | 28018 |
| YP_009009939.1 | NC_023608_p15 | hypothetical protein | phrog_3614 | unknown function | unknown function | 1 | 9851 | 10456 |
| YP_009009952.1 | NC_023608_p28 | hypothetical protein | phrog_384 | virion structural protein | head and packaging | 1 | 19095 | 19538 |
| YP_009009979.1 | NC_023608_p55 | hypothetical protein | phrog_2531 | unknown function | unknown function | 1 | 41482 | 41781 |
| YP_009009971.1 | NC_023608_p47 | hypothetical protein | phrog_4947 | unknown function | unknown function | 1 | 38684 | 39049 |
| YP_009009944.1 | NC_023608_p20 | DNA-binding protein | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 12824 | 13495 |
| YP_009009978.1 | NC_023608_p54 | hypothetical protein | phrog_268 | unknown function | unknown function | 1 | 41129 | 41485 |
| YP_009009927.1 | NC_023608_p3 | portal protein | phrog_145 | portal protein | head and packaging | 1 | 1846 | 3315 |
| YP_009009953.1 | NC_023608_p29 | hypothetical protein | phrog_396 | minor tail protein | tail | 1 | 19535 | 20050 |
| YP_009009961.1 | NC_023608_p37 | intein containing DNA polymerase precursor | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 28424 | 31522 |
| YP_009009976.1 | NC_023608_p52 | hypothetical protein | phrog_2180 | unknown function | unknown function | 1 | 40795 | 40980 |
| YP_009009977.1 | NC_023608_p53 | hypothetical protein | phrog_4684 | unknown function | unknown function | 1 | 40977 | 41132 |
| YP_009009938.1 | NC_023608_p14 | head-tail joining protein | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 9339 | 9848 |
| YP_009009951.1 | NC_023608_p27 | tape measure protein | phrog_1538 | tail length tape measure protein | tail | 1 | 16703 | 19036 |
| YP_009009928.1 | NC_023608_p4 | hypothetical protein | phrog_6095 | amidase | lysis | -1 | 3345 | 3995 |
| YP_009009949.1 | NC_023608_p25 | hypothetical protein | phrog_313 | Tail assembly chaperone | tail | 1 | 15929 | 16345 |
| YP_009009942.1 | NC_023608_p18 | structural protein | phrog_179 | tail terminator | connector | 1 | 11207 | 11626 |
| YP_009009926.1 | NC_023608_p2 | phage terminase, large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 562 | 1833 |
| YP_009009956.1 | NC_023608_p32 | tailspike protein | phrog_1819 | tail spike protein | tail | 1 | 22974 | 25028 |
| YP_009009969.1 | NC_023608_p45 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 37301 | 37471 |
| YP_009009933.1 | NC_023608_p9 | scaffold protein | phrog_206 | head scaffolding protein | head and packaging | 1 | 6563 | 7264 |