Genomic map of Geobacillus phage GBK2 (NC_023612)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023612
Definition
Geobacillus phage GBK2, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39078
Host Name
Geobacillus kaustophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
43.09
Number of singletons
20
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009010531.1 NC_023612_p60 hypothetical protein singleton unknown function unknown function 1 38556 38738
YP_009010481.1 NC_023612_p10 tail protein phrog_176 tail terminator connector 1 7547 7954
YP_009010529.1 NC_023612_p58 hypothetical protein singleton unknown function unknown function 1 38139 38300
YP_009010511.1 NC_023612_p40 SSB protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29035 29505
YP_009010498.1 NC_023612_p27 hypothetical protein singleton unknown function unknown function 1 21234 21368
YP_009010473.1 NC_023612_p2 terminase large subunit phrog_38 terminase large subunit head and packaging 1 500 2041
YP_009010527.1 NC_023612_p56 hypothetical protein singleton unknown function unknown function 1 37277 37633
YP_009010516.1 NC_023612_p45 primase phrog_16826 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 30825 31754
YP_009010478.1 NC_023612_p7 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 6373 6741
YP_009010532.1 NC_023612_p61 hypothetical protein singleton unknown function unknown function 1 38833 38991
YP_009010475.1 NC_023612_p4 prohead protein phrog_80 head maturation protease head and packaging 1 4169 4870
YP_009010494.1 NC_023612_p23 holin phrog_263 holin lysis 1 19788 20027
YP_009010474.1 NC_023612_p3 portal protein phrog_2662 portal protein head and packaging 1 2075 4132
YP_009010515.1 NC_023612_p44 hypothetical protein singleton unknown function unknown function 1 30570 30821
YP_009010510.1 NC_023612_p39 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28179 29042
YP_009010505.1 NC_023612_p34 hypothetical protein singleton unknown function unknown function 1 26120 26374
YP_009010507.1 NC_023612_p36 hypothetical protein singleton unknown function unknown function 1 26802 26975
YP_009010485.1 NC_023612_p14 tail tape measure protein phrog_58 tail length tape measure protein tail 1 9168 11351
YP_009010520.1 NC_023612_p49 DNA methylase phrog_67 DNA methyltransferase other 1 33942 34751
YP_009010501.1 NC_023612_p30 hypothetical protein phrog_5422 unknown function unknown function 1 22550 22891
YP_009010518.1 NC_023612_p47 helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32134 33468
YP_009010503.1 NC_023612_p32 hypothetical protein phrog_5156 unknown function unknown function 1 23270 25840
YP_009010504.1 NC_023612_p33 hypothetical protein singleton unknown function unknown function 1 25926 26078
YP_009010519.1 NC_023612_p48 hypothetical protein phrog_35666 unknown function unknown function 1 33505 33945
YP_009010528.1 NC_023612_p57 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37630 38121
YP_009010477.1 NC_023612_p6 hypothetical protein singleton unknown function unknown function 1 6131 6376
YP_009010495.1 NC_023612_p24 hypothetical protein phrog_24885 unknown function unknown function -1 20123 20542
YP_009010493.1 NC_023612_p22 lysin phrog_2649 endolysin lysis 1 19073 19720
YP_009010508.1 NC_023612_p37 hypothetical protein singleton unknown function unknown function 1 27013 27237
YP_009010482.1 NC_023612_p11 hypothetical protein phrog_1407 major tail protein tail 1 7973 8383
YP_009010514.1 NC_023612_p43 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 30350 30586
YP_009010486.1 NC_023612_p15 hypothetical protein phrog_33 distal tail protein Dit tail 1 11351 12097
YP_009010479.1 NC_023612_p8 head-tail adaptor phrog_25 head closure Hc1 connector 1 6746 7066
YP_009010487.1 NC_023612_p16 hypothetical protein singleton unknown function unknown function 1 12113 13171
YP_009010526.1 NC_023612_p55 hypothetical protein singleton unknown function unknown function 1 37091 37261
YP_009010483.1 NC_023612_p12 hypothetical protein phrog_2115 tail protein tail 1 8489 8875
YP_009010490.1 NC_023612_p19 hypothetical protein phrog_12827 tail protein tail 1 14850 15704
YP_009010513.1 NC_023612_p42 hypothetical protein singleton unknown function unknown function 1 29993 30208
YP_009010491.1 NC_023612_p20 glycoside hydrolase phrog_3432 minor tail protein tail 1 15701 18667
YP_009010533.1 NC_023612_p62 hypothetical protein singleton unknown function unknown function 1 38868 39068
YP_009010525.1 NC_023612_p54 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 36692 37078
YP_009010524.1 NC_023612_p53 hypothetical protein phrog_23069 unknown function unknown function 1 36318 36614
YP_009010476.1 NC_023612_p5 minor capsid protein phrog_10 major head protein head and packaging 1 4890 6065
YP_009010521.1 NC_023612_p50 hypothetical protein singleton unknown function unknown function 1 34792 35214
YP_009010499.1 NC_023612_p28 hypothetical protein singleton unknown function unknown function 1 21355 21921
YP_009010530.1 NC_023612_p59 hypothetical protein singleton unknown function unknown function 1 38315 38566
YP_009010497.1 NC_023612_p26 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 20993 21241
YP_009010489.1 NC_023612_p18 hypothetical protein phrog_3473 unknown function unknown function 1 14666 14860
YP_009010502.1 NC_023612_p31 hypothetical protein phrog_20592 unknown function unknown function 1 22896 23258
YP_009010492.1 NC_023612_p21 hypothetical protein phrog_689 holin lysis 1 18768 19058
YP_009010522.1 NC_023612_p51 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 35214 36083
YP_009010484.1 NC_023612_p13 hypothetical protein singleton unknown function unknown function 1 8968 9168
YP_009010480.1 NC_023612_p9 tail component protein phrog_5 tail completion or Neck1 protein connector 1 7071 7550
YP_009010472.1 NC_023612_p1 terminase small subunit phrog_309 terminase small subunit head and packaging 1 1 507
YP_009010517.1 NC_023612_p46 helicase loader phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 31754 32134
YP_009010512.1 NC_023612_p41 hypothetical protein phrog_12313 unknown function unknown function 1 29566 30003
YP_009010506.1 NC_023612_p35 hypothetical protein phrog_3754 unknown function unknown function 1 26471 26860
YP_009010488.1 NC_023612_p17 minor structural protein phrog_22322 tail protein tail 1 13184 14653
YP_009010523.1 NC_023612_p52 hypothetical protein phrog_3458 unknown function unknown function 1 36127 36324
YP_009010496.1 NC_023612_p25 hypothetical protein singleton unknown function unknown function 1 20797 20991
YP_009010500.1 NC_023612_p29 hypothetical protein phrog_17574 unknown function unknown function 1 22109 22414
YP_009010509.1 NC_023612_p38 recombinase phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 27391 28182