Genomic map of Croceibacter phage P2559Y (NC_023614)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023614
Definition
Croceibacter phage P2559Y, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
43153
Host Name
Croceibacter atlanticus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
38.92
Number of singletons
21
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009010754.1 NC_023614_p44 SEC-C motif protein singleton unknown function unknown function 1 39140 39316
YP_009010745.1 NC_023614_p35 DUTP diphosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 34332 34772
YP_009010721.1 NC_023614_p11 hypothetical protein phrog_8189 unknown function unknown function 1 8099 9397
YP_009010741.1 NC_023614_p31 SWI/SNF chromatin-remodeling complex subunit snf22 phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 32017 33405
YP_009010728.1 NC_023614_p18 hypothetical protein phrog_36068 unknown function unknown function 1 17810 21556
YP_009010735.1 NC_023614_p25 hypothetical protein phrog_5053 unknown function unknown function 1 24392 24811
YP_009010753.1 NC_023614_p43 hypothetical protein singleton unknown function unknown function 1 38727 39140
YP_009010714.1 NC_023614_p4 tail protein phrog_8193 major head protein head and packaging 1 2523 3176
YP_009010734.1 NC_023614_p24 hypothetical protein singleton unknown function unknown function 1 23952 24362
YP_009010720.1 NC_023614_p10 phage capsid protein phrog_7231 virion structural protein head and packaging 1 7061 7996
YP_009010722.1 NC_023614_p12 hypothetical protein phrog_6195 tail protein tail 1 9400 9840
YP_009010726.1 NC_023614_p16 hypothetical protein phrog_19383 unknown function unknown function 1 14388 16940
YP_009010749.1 NC_023614_p39 hypothetical protein phrog_1365 unknown function unknown function 1 35944 36309
YP_009010733.1 NC_023614_p23 hypothetical protein singleton unknown function unknown function 1 22998 23621
YP_009010756.1 NC_023614_p46 hypothetical protein singleton unknown function unknown function 1 40129 40368
YP_009010736.1 NC_023614_p26 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 24822 25988
YP_009010715.1 NC_023614_p5 hypothetical protein singleton unknown function unknown function 1 3188 3385
YP_009010718.1 NC_023614_p8 capsid associated protein phrog_7970 virion structural protein head and packaging 1 5580 6524
YP_009010752.1 NC_023614_p42 hypothetical protein singleton unknown function unknown function 1 38446 38709
YP_009010738.1 NC_023614_p28 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 27340 29352
YP_009010725.1 NC_023614_p15 phage tail length tape-measure protein phrog_20660 tail length tape measure protein tail 1 11393 14395
YP_009010724.1 NC_023614_p14 hypothetical protein phrog_8914 virion structural protein head and packaging 1 10647 11390
YP_009010723.1 NC_023614_p13 hypothetical protein phrog_8145 unknown function unknown function 1 9837 10403
YP_009010712.1 NC_023614_p2 terminase-like family protein phrog_38 terminase large subunit head and packaging 1 730 2154
YP_009010729.1 NC_023614_p19 hypothetical protein singleton unknown function unknown function 1 21564 21896
YP_009010742.1 NC_023614_p32 hypothetical protein phrog_4276 unknown function unknown function 1 33412 33624
YP_009010739.1 NC_023614_p29 virulence-associated protein E phrog_256 DNA helicase DNA, RNA and nucleotide metabolism 1 29361 31739
YP_009010711.1 NC_023614_p1 terminase small subunit phrog_1482 terminase small subunit head and packaging 1 240 752
YP_009010746.1 NC_023614_p36 hypothetical protein singleton unknown function unknown function 1 34772 35296
YP_009010732.1 NC_023614_p22 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 22504 22986
YP_009010758.1 NC_023614_p48 hypothetical protein singleton unknown function unknown function 1 40709 41098
YP_009010747.1 NC_023614_p37 hypothetical protein singleton unknown function unknown function 1 35445 35681
YP_009010719.1 NC_023614_p9 hypothetical protein singleton unknown function unknown function 1 6598 6885
YP_009010761.1 NC_023614_p51 hypothetical protein phrog_424 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 41791 42738
YP_009010716.1 NC_023614_p6 phage capsid protein phrog_7376 portal protein head and packaging 1 3336 5060
YP_009010750.1 NC_023614_p40 DNA methyltransferase phrog_116 DNA methyltransferase other 1 36306 37319
YP_009010748.1 NC_023614_p38 hypothetical protein singleton unknown function unknown function 1 35684 35947
YP_009010760.1 NC_023614_p50 hypothetical protein singleton unknown function unknown function 1 41678 41806
YP_009010744.1 NC_023614_p34 hypothetical protein singleton unknown function unknown function 1 34229 34351
YP_009010731.1 NC_023614_p21 hypothetical protein singleton unknown function unknown function 1 22293 22499
YP_009010737.1 NC_023614_p27 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 26087 26620
YP_009010713.1 NC_023614_p3 hypothetical protein singleton unknown function unknown function -1 2199 2489
YP_009010751.1 NC_023614_p41 DNA methyltransferase phrog_116 DNA methyltransferase other 1 37321 38442
YP_009010755.1 NC_023614_p45 DNA methyltransferase phrog_56 DNA methyltransferase other 1 39325 40047
YP_009010727.1 NC_023614_p17 hypothetical protein phrog_35885 unknown function unknown function 1 16927 17799
YP_009010759.1 NC_023614_p49 exonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 41098 41676
YP_009010740.1 NC_023614_p30 VRR-NUC domain protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 31740 32033
YP_009010757.1 NC_023614_p47 hypothetical protein singleton unknown function unknown function 1 40371 40706
YP_009010730.1 NC_023614_p20 hypothetical protein singleton unknown function unknown function 1 21893 22228
YP_009010717.1 NC_023614_p7 hypothetical protein singleton unknown function unknown function 1 5017 5514
YP_009010743.1 NC_023614_p33 hypothetical protein singleton unknown function unknown function 1 33673 34074