Genomic map of Mycobacterium phage Lilac (NC_023689)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023689
Definition
Mycobacterium phage Lilac, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
REFSEQ
Length
76260
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
140
%GC
62.96
Number of singletons
1
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009011832.1 NC_023689_p73 hypothetical protein phrog_2771 unknown function unknown function 1 46362 46832
YP_009011814.1 NC_023689_p55 integrase Y-int phrog_1 integrase integration and excision 1 37492 38373
YP_009011866.1 NC_023689_p107 hypothetical protein phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62947 63237
YP_009011760.1 NC_023689_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270
YP_009011890.1 NC_023689_p131 hypothetical protein phrog_2287 unknown function unknown function -1 72443 72679
YP_009011845.1 NC_023689_p86 hypothetical protein phrog_2747 unknown function unknown function 1 51578 51799
YP_009011860.1 NC_023689_p101 DNA methyltransferase phrog_67 DNA methyltransferase other 1 58401 60605
YP_009011768.1 NC_023689_p9 hypothetical protein phrog_2202 unknown function unknown function -1 1947 2255
YP_009011820.1 NC_023689_p61 hypothetical protein phrog_2463 unknown function unknown function 1 41330 41476
YP_009011830.1 NC_023689_p71 Erf phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 45336 46058
YP_009011795.1 NC_023689_p36 hypothetical protein phrog_2424 unknown function unknown function 1 31020 31358
YP_009011886.1 NC_023689_p127 hypothetical protein phrog_13319 unknown function unknown function -1 70734 71186
YP_009011805.1 NC_023689_p46 hypothetical protein phrog_722 unknown function unknown function -1 34785 35189
YP_009011803.1 NC_023689_p44 hypothetical protein phrog_5831 unknown function unknown function -1 34397 34579
YP_009011771.1 NC_023689_p12 portal phrog_12 portal protein head and packaging 1 4191 5747
YP_009011793.1 NC_023689_p34 LysA phrog_317 endolysin lysis 1 29138 30640
YP_009011789.1 NC_023689_p30 hypothetical protein phrog_553 minor tail protein tail 1 27015 27977
YP_009011790.1 NC_023689_p31 hypothetical protein phrog_644 unknown function unknown function 1 28047 28475
YP_009011848.1 NC_023689_p89 hypothetical protein phrog_2894 unknown function unknown function 1 52513 52707
YP_009011865.1 NC_023689_p106 hypothetical protein phrog_1969 unknown function unknown function 1 62583 62894
YP_009011846.1 NC_023689_p87 hypothetical protein phrog_3836 unknown function unknown function 1 51792 52157
YP_009011855.1 NC_023689_p96 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 56626 56886
YP_009011831.1 NC_023689_p72 hypothetical protein phrog_2750 unknown function unknown function 1 46051 46362
YP_009011810.1 NC_023689_p51 hypothetical protein phrog_2702 unknown function unknown function -1 35877 36092
YP_009011852.1 NC_023689_p93 hypothetical protein phrog_10857 unknown function unknown function 1 54177 54449
YP_009011851.1 NC_023689_p92 hypothetical protein phrog_2844 unknown function unknown function 1 54082 54180
YP_009011882.1 NC_023689_p123 hypothetical protein phrog_2925 unknown function unknown function 1 68670 68849
YP_009011849.1 NC_023689_p90 Pnk phrog_505 polynucleotide kinase other 1 52860 53801
YP_009011892.1 NC_023689_p133 hypothetical protein phrog_3174 unknown function unknown function -1 73247 73642
YP_009011774.1 NC_023689_p15 hypothetical protein phrog_2796 head-tail connector protein connector 1 8455 8634
YP_009011870.1 NC_023689_p111 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 64563 65042
YP_009011864.1 NC_023689_p105 hypothetical protein phrog_2757 unknown function unknown function 1 62288 62578
YP_009011883.1 NC_023689_p124 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69515 69778
YP_009011858.1 NC_023689_p99 hypothetical protein phrog_2788 unknown function unknown function 1 57530 57865
YP_009011807.1 NC_023689_p48 hypothetical protein phrog_4396 unknown function unknown function -1 35356 35484
YP_009011819.1 NC_023689_p60 pentapeptide domain phrog_923 unknown function unknown function 1 40483 41328
YP_009011786.1 NC_023689_p27 minor tail subunit phrog_732 minor tail protein tail 1 20931 21764
YP_009011853.1 NC_023689_p94 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 54446 55771
YP_009011878.1 NC_023689_p119 hypothetical protein phrog_2174 unknown function unknown function 1 67730 68191
YP_009011863.1 NC_023689_p104 hypothetical protein phrog_2785 unknown function unknown function 1 61931 62287
YP_009011782.1 NC_023689_p23 tail assembly chaperone phrog_15493 tail assembly chaperone tail 1 12368 12835
YP_009011875.1 NC_023689_p116 hypothetical protein phrog_2755 unknown function unknown function 1 67168 67341
YP_009011804.1 NC_023689_p45 hypothetical protein phrog_3447 unknown function unknown function -1 34576 34788
YP_009011834.1 NC_023689_p75 hypothetical protein phrog_572 unknown function unknown function 1 47197 47571
YP_009011783.1 NC_023689_p24 tapemeasure phrog_2723 tail length tape measure protein tail 1 12828 17564
YP_009011811.1 NC_023689_p52 hypothetical protein phrog_2815 unknown function unknown function -1 36111 36257
YP_009011770.1 NC_023689_p11 hypothetical protein phrog_2845 unknown function unknown function 1 3983 4204
YP_009011842.1 NC_023689_p83 DnaB-like helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49899 51161
YP_009011887.1 NC_023689_p128 hypothetical protein phrog_1915 unknown function unknown function -1 71183 71659
YP_009011861.1 NC_023689_p102 ssDNA binding phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60598 61038
YP_009011815.1 NC_023689_p56 hypothetical protein phrog_2842 unknown function unknown function 1 38512 38751
YP_009011773.1 NC_023689_p14 major capsid phrog_10 major head protein head and packaging 1 6839 8332
YP_009011784.1 NC_023689_p25 minor tail subunit phrog_106 minor tail protein tail 1 17594 19255
YP_009011816.1 NC_023689_p57 hypothetical protein phrog_950 unknown function unknown function -1 38729 39502
YP_009011879.1 NC_023689_p120 hypothetical protein phrog_2764 unknown function unknown function 1 68188 68355
YP_009011867.1 NC_023689_p108 hypothetical protein phrog_2846 unknown function unknown function 1 63619 63915
YP_009011833.1 NC_023689_p74 hypothetical protein phrog_1389 unknown function unknown function 1 46832 47200
YP_009011763.1 NC_023689_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
YP_009011798.1 NC_023689_p39 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 32632 32877
YP_009011877.1 NC_023689_p118 hypothetical protein phrog_3062 unknown function unknown function 1 67527 67781
YP_009011779.1 NC_023689_p20 major tail subunit phrog_476 major tail protein tail 1 10336 11310
YP_009011884.1 NC_023689_p125 ParBc domain phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69775 70164
YP_009011856.1 NC_023689_p97 hypothetical protein phrog_2853 unknown function unknown function 1 56903 57061
YP_009011841.1 NC_023689_p82 hypothetical protein phrog_572 unknown function unknown function 1 49574 49906
YP_009011881.1 NC_023689_p122 hypothetical protein phrog_2296 unknown function unknown function 1 68536 68673
YP_009011885.1 NC_023689_p126 hypothetical protein phrog_2942 unknown function unknown function -1 70283 70570
YP_009011837.1 NC_023689_p78 hypothetical protein phrog_289 GTP-binding domain other 1 47977 48390
YP_009011876.1 NC_023689_p117 hypothetical protein phrog_2279 unknown function unknown function 1 67334 67546
YP_009011874.1 NC_023689_p115 hypothetical protein phrog_2965 unknown function unknown function 1 67044 67181
YP_009011765.1 NC_023689_p6 hypothetical protein phrog_8426 unknown function unknown function 1 1033 1182
YP_009011898.1 NC_023689_p139 hypothetical protein phrog_2762 unknown function unknown function 1 75468 75689
YP_009011895.1 NC_023689_p136 hypothetical protein phrog_2795 unknown function unknown function -1 74417 74671
YP_009011781.1 NC_023689_p22 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 11964 12425
YP_009011776.1 NC_023689_p17 hypothetical protein phrog_1531 head closure connector 1 9215 9550
YP_009011766.1 NC_023689_p7 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1175 1636
YP_009011821.1 NC_023689_p62 hypothetical protein phrog_2800 unknown function unknown function 1 41473 41751
YP_009011772.1 NC_023689_p13 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 5750 6751
YP_009011818.1 NC_023689_p59 hypothetical protein phrog_2852 unknown function unknown function 1 40349 40486
YP_009011797.1 NC_023689_p38 hypothetical protein phrog_726 unknown function unknown function 1 32209 32625
YP_009011844.1 NC_023689_p85 hypothetical protein phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 51343 51603
YP_009011880.1 NC_023689_p121 hypothetical protein phrog_2823 unknown function unknown function 1 68339 68539
YP_009011893.1 NC_023689_p134 hypothetical protein phrog_4496 unknown function unknown function -1 73647 74000
YP_009011899.1 NC_023689_p140 hypothetical protein phrog_8627 unknown function unknown function 1 75734 76147
YP_009011872.1 NC_023689_p113 hypothetical protein phrog_1941 unknown function unknown function 1 65835 66077
YP_009011812.1 NC_023689_p53 hypothetical protein phrog_2759 unknown function unknown function -1 36257 36652
YP_009011839.1 NC_023689_p80 hypothetical protein phrog_1673 unknown function unknown function 1 48694 48930
YP_009011869.1 NC_023689_p110 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64186 64560
YP_009011791.1 NC_023689_p32 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28462 28647
YP_009011894.1 NC_023689_p135 hypothetical protein phrog_2772 unknown function unknown function -1 74175 74420
YP_009011871.1 NC_023689_p112 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 65053 65838
YP_009011889.1 NC_023689_p130 hypothetical protein phrog_4547 unknown function unknown function -1 72005 72322
YP_009011761.1 NC_023689_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
YP_009011847.1 NC_023689_p88 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52154 52516
YP_009011767.1 NC_023689_p8 hypothetical protein phrog_4101 unknown function unknown function -1 1708 1947
YP_009011799.1 NC_023689_p40 Lsr2 phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33057 33443
YP_009011873.1 NC_023689_p114 RecA phrog_97 UvsX-like recombinase other 1 66085 67047
YP_009011802.1 NC_023689_p43 hypothetical protein phrog_3472 unknown function unknown function -1 34146 34400
YP_009011827.1 NC_023689_p68 hypothetical protein phrog_762 unknown function unknown function 1 43645 43971
YP_009011769.1 NC_023689_p10 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2301 3971
YP_009011787.1 NC_023689_p28 minor tail subunit phrog_346 minor tail protein tail 1 21781 24177
YP_009011862.1 NC_023689_p103 Clp protease phrog_94 head maturation protease head and packaging 1 61155 61934
YP_009011868.1 NC_023689_p109 hypothetical protein phrog_1042 unknown function unknown function 1 63912 64175
YP_009011891.1 NC_023689_p132 hypothetical protein phrog_2883 unknown function unknown function -1 72695 73243
YP_009011859.1 NC_023689_p100 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57898 58404
YP_009011850.1 NC_023689_p91 hypothetical protein singleton unknown function unknown function 1 53804 54085
YP_009011896.1 NC_023689_p137 hypothetical protein phrog_2904 unknown function unknown function 1 74736 75095
YP_009011854.1 NC_023689_p95 hypothetical protein phrog_1590 unknown function unknown function 1 55826 56629
YP_009011796.1 NC_023689_p37 LysB phrog_102 endolysin lysis 1 31355 32212
YP_009011775.1 NC_023689_p16 hypothetical protein phrog_442 head-tail adaptor connector 1 8634 9200
YP_009011806.1 NC_023689_p47 hypothetical protein phrog_1155 unknown function unknown function -1 35186 35359
YP_009011825.1 NC_023689_p66 hypothetical protein phrog_2221 unknown function unknown function 1 42966 43127
YP_009011826.1 NC_023689_p67 hypothetical protein phrog_301 secreted protein other 1 43316 43648
YP_009011777.1 NC_023689_p18 hypothetical protein phrog_2805 minor tail protein tail 1 9547 9927
YP_009011788.1 NC_023689_p29 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 24174 27014
YP_009011808.1 NC_023689_p49 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 35484 35651
YP_009011813.1 NC_023689_p54 hypothetical protein phrog_2847 unknown function unknown function -1 36939 37262
YP_009011824.1 NC_023689_p65 hypothetical protein phrog_2147 unknown function unknown function 1 42734 43033
YP_009011857.1 NC_023689_p98 hypothetical protein phrog_889 unknown function unknown function 1 57058 57528
YP_009011835.1 NC_023689_p76 hypothetical protein phrog_1622 unknown function unknown function 1 47571 47750
YP_009011829.1 NC_023689_p70 hypothetical protein phrog_572 unknown function unknown function 1 44933 45343
YP_009011800.1 NC_023689_p41 hypothetical protein phrog_3481 unknown function unknown function -1 33491 33682
YP_009011794.1 NC_023689_p35 holin phrog_526 holin lysis 1 30644 31027
YP_009011778.1 NC_023689_p19 hypothetical protein phrog_813 head-tail adaptor connector 1 9905 10309
YP_009011897.1 NC_023689_p138 hypothetical protein phrog_8080 unknown function unknown function -1 75142 75360
YP_009011780.1 NC_023689_p21 hypothetical protein phrog_5711 head fiber protein head and packaging 1 11370 11843
YP_009011888.1 NC_023689_p129 hypothetical protein phrog_1587 unknown function unknown function -1 71674 72003
YP_009011785.1 NC_023689_p26 minor tail subunit phrog_110 minor tail protein tail 1 19243 20922
YP_009011822.1 NC_023689_p63 hypothetical protein phrog_2744 unknown function unknown function 1 42295 42600
YP_009011762.1 NC_023689_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
YP_009011764.1 NC_023689_p5 hypothetical protein phrog_3858 unknown function unknown function 1 783 1055
YP_009011792.1 NC_023689_p33 hypothetical protein phrog_411 unknown function unknown function 1 28780 29064
YP_009011828.1 NC_023689_p69 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43968 44936
YP_009011823.1 NC_023689_p64 hypothetical protein phrog_3463 unknown function unknown function 1 42619 42726
YP_009011838.1 NC_023689_p79 HNH endonuclease domain phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48387 48704
YP_009011836.1 NC_023689_p77 hypothetical protein phrog_2793 unknown function unknown function 1 47747 47980
YP_009011801.1 NC_023689_p42 hypothetical protein phrog_647 unknown function unknown function -1 33685 34149
YP_009011817.1 NC_023689_p58 hypothetical protein phrog_2745 transcriptional repressor transcription regulation -1 39597 40028
YP_009011840.1 NC_023689_p81 hypothetical protein phrog_1882 unknown function unknown function 1 48927 49577
YP_009011843.1 NC_023689_p84 hypothetical protein phrog_1091 unknown function unknown function 1 51158 51346
YP_009011809.1 NC_023689_p50 hypothetical protein phrog_2893 unknown function unknown function -1 35648 35818