| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023694 |
Definition |
Rhodococcus phage ReqiPoco6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pepyhexavirus. |
DB of origin |
REFSEQ |
Length |
78064 |
Host Name |
Rhodococcus equi |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
107 |
%GC |
53.26 |
Number of singletons |
13 |
Number of paralogs |
11 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009012588.1 | NC_023694_p7 | hypothetical protein | phrog_33609 | unknown function | unknown function | 1 | 10199 | 10501 |
| YP_009012641.1 | NC_023694_p60 | hypothetical protein | phrog_38041 | unknown function | unknown function | 1 | 47654 | 48070 |
| YP_009012624.1 | NC_023694_p43 | hypothetical protein | phrog_32238 | unknown function | unknown function | 1 | 41800 | 42015 |
| YP_009012632.1 | NC_023694_p51 | hypothetical protein | phrog_28025 | unknown function | unknown function | 1 | 44870 | 45049 |
| YP_009012674.1 | NC_023694_p93 | hypothetical protein | phrog_37238 | unknown function | unknown function | 1 | 66117 | 66356 |
| YP_009012637.1 | NC_023694_p56 | hypothetical protein | phrog_29121 | unknown function | unknown function | 1 | 46737 | 46937 |
| YP_009012620.1 | NC_023694_p39 | hypothetical protein | phrog_24913 | unknown function | unknown function | 1 | 40100 | 40726 |
| YP_009012603.1 | NC_023694_p22 | hypothetical protein | phrog_14126 | unknown function | unknown function | 1 | 21022 | 21411 |
| YP_009012688.1 | NC_023694_p107 | hypothetical protein | phrog_4303 | unknown function | unknown function | 1 | 77535 | 77777 |
| YP_009012673.1 | NC_023694_p92 | hypothetical protein | phrog_35556 | unknown function | unknown function | 1 | 65593 | 66117 |
| YP_009012631.1 | NC_023694_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44570 | 44830 |
| YP_009012644.1 | NC_023694_p63 | hypothetical protein | phrog_27587 | unknown function | unknown function | 1 | 48568 | 48819 |
| YP_009012608.1 | NC_023694_p27 | hypothetical protein | phrog_4270 | unknown function | unknown function | 1 | 26302 | 26655 |
| YP_009012582.1 | NC_023694_p1 | tail fiber protein | phrog_33904 | tail fiber protein | tail | 1 | 115 | 1740 |
| YP_009012675.1 | NC_023694_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66353 | 66595 |
| YP_009012604.1 | NC_023694_p23 | hypothetical protein | phrog_6291 | unknown function | unknown function | 1 | 21412 | 21957 |
| YP_009012597.1 | NC_023694_p16 | TerL | phrog_9 | terminase large subunit | head and packaging | 1 | 15744 | 17489 |
| YP_009012687.1 | NC_023694_p106 | structural protein | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 74805 | 77525 |
| YP_009012672.1 | NC_023694_p91 | hypothetical protein | phrog_32271 | unknown function | unknown function | 1 | 65328 | 65543 |
| YP_009012610.1 | NC_023694_p29 | head protein | phrog_2645 | major tail protein | tail | 1 | 26936 | 27823 |
| YP_009012627.1 | NC_023694_p46 | hypothetical protein | phrog_29246 | unknown function | unknown function | 1 | 43401 | 43652 |
| YP_009012653.1 | NC_023694_p72 | hypothetical protein | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 53885 | 57769 |
| YP_009012599.1 | NC_023694_p18 | hypothetical protein | phrog_14126 | unknown function | unknown function | 1 | 17635 | 18006 |
| YP_009012640.1 | NC_023694_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47541 | 47654 |
| YP_009012600.1 | NC_023694_p19 | hypothetical protein | phrog_7502 | unknown function | unknown function | 1 | 18028 | 18864 |
| YP_009012683.1 | NC_023694_p102 | hypothetical protein | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 71433 | 73058 |
| YP_009012605.1 | NC_023694_p24 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 21999 | 23339 |
| YP_009012601.1 | NC_023694_p20 | hypothetical protein | phrog_35934 | virion structural protein | head and packaging | 1 | 18864 | 19847 |
| YP_009012594.1 | NC_023694_p13 | holin | phrog_29195 | holin | lysis | 1 | 13240 | 13728 |
| YP_009012679.1 | NC_023694_p98 | hypothetical protein | phrog_31149 | unknown function | unknown function | 1 | 67378 | 67938 |
| YP_009012625.1 | NC_023694_p44 | hypothetical protein | phrog_12653 | unknown function | unknown function | 1 | 42042 | 42242 |
| YP_009012680.1 | NC_023694_p99 | hypothetical protein | phrog_35090 | unknown function | unknown function | 1 | 67978 | 70206 |
| YP_009012669.1 | NC_023694_p88 | hypothetical protein | phrog_19093 | unknown function | unknown function | 1 | 63884 | 64357 |
| YP_009012607.1 | NC_023694_p26 | prohead protease | phrog_3270 | head maturation protease | head and packaging | 1 | 24152 | 26290 |
| YP_009012635.1 | NC_023694_p54 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 45647 | 46453 |
| YP_009012665.1 | NC_023694_p84 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 62459 | 62719 |
| YP_009012682.1 | NC_023694_p101 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71260 | 71418 |
| YP_009012684.1 | NC_023694_p103 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 73353 | 73844 |
| YP_009012613.1 | NC_023694_p32 | hypothetical protein | phrog_22009 | unknown function | unknown function | 1 | 29245 | 29754 |
| YP_009012686.1 | NC_023694_p105 | hypothetical protein | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 74220 | 74774 |
| YP_009012668.1 | NC_023694_p87 | hypothetical protein | phrog_19093 | unknown function | unknown function | 1 | 63317 | 63877 |
| YP_009012676.1 | NC_023694_p95 | hypothetical protein | phrog_29296 | unknown function | unknown function | 1 | 66625 | 66756 |
| YP_009012663.1 | NC_023694_p82 | hypothetical protein | phrog_32781 | unknown function | unknown function | 1 | 61476 | 61685 |
| YP_009012590.1 | NC_023694_p9 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11377 | 11601 |
| YP_009012630.1 | NC_023694_p49 | hypothetical protein | phrog_29055 | unknown function | unknown function | 1 | 44379 | 44486 |
| YP_009012664.1 | NC_023694_p83 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 61682 | 62455 |
| YP_009012598.1 | NC_023694_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17508 | 17648 |
| YP_009012655.1 | NC_023694_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58163 | 58312 |
| YP_009012617.1 | NC_023694_p36 | tape measure protein | phrog_4372 | tail length tape measure protein | tail | 1 | 32036 | 37891 |
| YP_009012593.1 | NC_023694_p12 | LysA | phrog_880 | endolysin | lysis | 1 | 12440 | 13237 |
| YP_009012639.1 | NC_023694_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47162 | 47548 |
| YP_009012602.1 | NC_023694_p21 | hypothetical protein | phrog_7502 | unknown function | unknown function | 1 | 19849 | 20922 |
| YP_009012626.1 | NC_023694_p45 | hypothetical protein | phrog_28747 | unknown function | unknown function | 1 | 42342 | 42620 |
| YP_009012681.1 | NC_023694_p100 | hypothetical protein | phrog_35414 | unknown function | unknown function | 1 | 70248 | 71021 |
| YP_009012591.1 | NC_023694_p10 | hypothetical protein | phrog_4259 | unknown function | unknown function | 1 | 11626 | 11982 |
| YP_009012652.1 | NC_023694_p71 | hypothetical protein | phrog_4678 | unknown function | unknown function | 1 | 53300 | 53851 |
| YP_009012606.1 | NC_023694_p25 | hypothetical protein | phrog_12541 | unknown function | unknown function | 1 | 23341 | 23991 |
| YP_009012645.1 | NC_023694_p64 | hypothetical protein | phrog_6802 | unknown function | unknown function | 1 | 48918 | 49439 |
| YP_009012592.1 | NC_023694_p11 | hypothetical protein | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 11972 | 12382 |
| YP_009012589.1 | NC_023694_p8 | tail fiber protein | phrog_38417 | hyaluronidase | other | 1 | 10518 | 11354 |
| YP_009012671.1 | NC_023694_p90 | hypothetical protein | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 64603 | 65316 |
| YP_009012595.1 | NC_023694_p14 | hypothetical protein | phrog_4247 | virion structural protein | head and packaging | 1 | 13767 | 14114 |
| YP_009012634.1 | NC_023694_p53 | hypothetical protein | phrog_30341 | unknown function | unknown function | 1 | 45384 | 45608 |
| YP_009012638.1 | NC_023694_p57 | hypothetical protein | phrog_32424 | unknown function | unknown function | 1 | 46930 | 47169 |
| YP_009012643.1 | NC_023694_p62 | hypothetical protein | phrog_34332 | unknown function | unknown function | 1 | 48245 | 48499 |
| YP_009012586.1 | NC_023694_p5 | tail fiber protein | phrog_24580 | tail fiber protein | tail | 1 | 6696 | 7574 |
| YP_009012651.1 | NC_023694_p70 | hypothetical protein | phrog_4695 | unknown function | unknown function | 1 | 52419 | 53303 |
| YP_009012596.1 | NC_023694_p15 | hypothetical protein | phrog_24711 | unknown function | unknown function | 1 | 14111 | 15727 |
| YP_009012660.1 | NC_023694_p79 | hypothetical protein | phrog_33255 | unknown function | unknown function | 1 | 60415 | 60738 |
| YP_009012618.1 | NC_023694_p37 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 37888 | 38715 |
| YP_009012646.1 | NC_023694_p65 | hypothetical protein | phrog_4282 | unknown function | unknown function | 1 | 49493 | 50125 |
| YP_009012654.1 | NC_023694_p73 | hypothetical protein | phrog_19221 | unknown function | unknown function | 1 | 57777 | 58157 |
| YP_009012587.1 | NC_023694_p6 | tail fiber protein | phrog_15881 | tail protein | tail | 1 | 7590 | 10160 |
| YP_009012648.1 | NC_023694_p67 | hypothetical protein | phrog_4079 | unknown function | unknown function | 1 | 50642 | 51319 |
| YP_009012623.1 | NC_023694_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41451 | 41741 |
| YP_009012670.1 | NC_023694_p89 | hypothetical protein | phrog_37300 | unknown function | unknown function | 1 | 64370 | 64606 |
| YP_009012629.1 | NC_023694_p48 | hypothetical protein | phrog_26966 | unknown function | unknown function | 1 | 44097 | 44333 |
| YP_009012612.1 | NC_023694_p31 | head protein | phrog_2645 | major tail protein | tail | 1 | 28428 | 29231 |
| YP_009012633.1 | NC_023694_p52 | hypothetical protein | phrog_32807 | unknown function | unknown function | 1 | 45081 | 45365 |
| YP_009012667.1 | NC_023694_p86 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 63028 | 63312 |
| YP_009012685.1 | NC_023694_p104 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 73946 | 74275 |
| YP_009012584.1 | NC_023694_p3 | tail fiber protein | phrog_11419 | tail fiber protein | tail | 1 | 4035 | 5780 |
| YP_009012649.1 | NC_023694_p68 | hypothetical protein | phrog_6038 | unknown function | unknown function | 1 | 51359 | 51502 |
| YP_009012614.1 | NC_023694_p33 | hypothetical protein | phrog_23770 | unknown function | unknown function | 1 | 29751 | 30818 |
| YP_009012622.1 | NC_023694_p41 | hypothetical protein | phrog_5818 | unknown function | unknown function | 1 | 40906 | 41271 |
| YP_009012616.1 | NC_023694_p35 | structural protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 31659 | 32039 |
| YP_009012583.1 | NC_023694_p2 | tail fiber protein | phrog_27786 | tail spike protein | tail | 1 | 1771 | 3999 |
| YP_009012611.1 | NC_023694_p30 | hypothetical protein | phrog_4338 | unknown function | unknown function | 1 | 27855 | 28409 |
| YP_009012642.1 | NC_023694_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48067 | 48252 |
| YP_009012621.1 | NC_023694_p40 | hypothetical protein | phrog_33583 | unknown function | unknown function | 1 | 40572 | 40913 |
| YP_009012661.1 | NC_023694_p80 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 60766 | 61053 |
| YP_009012585.1 | NC_023694_p4 | hypothetical protein | phrog_18370 | unknown function | unknown function | 1 | 5777 | 6637 |
| YP_009012615.1 | NC_023694_p34 | LysB | phrog_102 | endolysin | lysis | 1 | 30846 | 31637 |
| YP_009012647.1 | NC_023694_p66 | hypothetical protein | phrog_7539 | unknown function | unknown function | 1 | 50294 | 50566 |
| YP_009012636.1 | NC_023694_p55 | hypothetical protein | phrog_25998 | unknown function | unknown function | 1 | 46490 | 46744 |
| YP_009012650.1 | NC_023694_p69 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 51514 | 52407 |
| YP_009012628.1 | NC_023694_p47 | hypothetical protein | phrog_32469 | unknown function | unknown function | 1 | 43752 | 44030 |
| YP_009012666.1 | NC_023694_p85 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 62716 | 63015 |
| YP_009012677.1 | NC_023694_p96 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66807 | 66938 |
| YP_009012657.1 | NC_023694_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59097 | 59213 |
| YP_009012658.1 | NC_023694_p77 | hypothetical protein | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 59210 | 59797 |
| YP_009012659.1 | NC_023694_p78 | hypothetical protein | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 59837 | 60418 |
| YP_009012609.1 | NC_023694_p28 | structural protein | phrog_78 | tail terminator | connector | 1 | 26618 | 26920 |
| YP_009012656.1 | NC_023694_p75 | hypothetical protein | phrog_19221 | unknown function | unknown function | 1 | 58350 | 59084 |
| YP_009012678.1 | NC_023694_p97 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67088 | 67375 |
| YP_009012619.1 | NC_023694_p38 | hypothetical protein | phrog_538 | minor tail protein | tail | 1 | 38719 | 40113 |
| YP_009012662.1 | NC_023694_p81 | hypothetical protein | phrog_7996 | unknown function | unknown function | 1 | 61081 | 61374 |