Genomic map of Rhodococcus phage ReqiPoco6 (NC_023694)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023694
Definition
Rhodococcus phage ReqiPoco6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pepyhexavirus.
DB of origin
REFSEQ
Length
78064
Host Name
Rhodococcus equi
Host domain
Bacteria
Is prophage?
undef
Number of proteins
107
%GC
53.26
Number of singletons
13
Number of paralogs
11

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009012588.1 NC_023694_p7 hypothetical protein phrog_33609 unknown function unknown function 1 10199 10501
YP_009012641.1 NC_023694_p60 hypothetical protein phrog_38041 unknown function unknown function 1 47654 48070
YP_009012624.1 NC_023694_p43 hypothetical protein phrog_32238 unknown function unknown function 1 41800 42015
YP_009012632.1 NC_023694_p51 hypothetical protein phrog_28025 unknown function unknown function 1 44870 45049
YP_009012674.1 NC_023694_p93 hypothetical protein phrog_37238 unknown function unknown function 1 66117 66356
YP_009012637.1 NC_023694_p56 hypothetical protein phrog_29121 unknown function unknown function 1 46737 46937
YP_009012620.1 NC_023694_p39 hypothetical protein phrog_24913 unknown function unknown function 1 40100 40726
YP_009012603.1 NC_023694_p22 hypothetical protein phrog_14126 unknown function unknown function 1 21022 21411
YP_009012688.1 NC_023694_p107 hypothetical protein phrog_4303 unknown function unknown function 1 77535 77777
YP_009012673.1 NC_023694_p92 hypothetical protein phrog_35556 unknown function unknown function 1 65593 66117
YP_009012631.1 NC_023694_p50 hypothetical protein singleton unknown function unknown function 1 44570 44830
YP_009012644.1 NC_023694_p63 hypothetical protein phrog_27587 unknown function unknown function 1 48568 48819
YP_009012608.1 NC_023694_p27 hypothetical protein phrog_4270 unknown function unknown function 1 26302 26655
YP_009012582.1 NC_023694_p1 tail fiber protein phrog_33904 tail fiber protein tail 1 115 1740
YP_009012675.1 NC_023694_p94 hypothetical protein singleton unknown function unknown function 1 66353 66595
YP_009012604.1 NC_023694_p23 hypothetical protein phrog_6291 unknown function unknown function 1 21412 21957
YP_009012597.1 NC_023694_p16 TerL phrog_9 terminase large subunit head and packaging 1 15744 17489
YP_009012687.1 NC_023694_p106 structural protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 74805 77525
YP_009012672.1 NC_023694_p91 hypothetical protein phrog_32271 unknown function unknown function 1 65328 65543
YP_009012610.1 NC_023694_p29 head protein phrog_2645 major tail protein tail 1 26936 27823
YP_009012627.1 NC_023694_p46 hypothetical protein phrog_29246 unknown function unknown function 1 43401 43652
YP_009012653.1 NC_023694_p72 hypothetical protein phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 53885 57769
YP_009012599.1 NC_023694_p18 hypothetical protein phrog_14126 unknown function unknown function 1 17635 18006
YP_009012640.1 NC_023694_p59 hypothetical protein singleton unknown function unknown function 1 47541 47654
YP_009012600.1 NC_023694_p19 hypothetical protein phrog_7502 unknown function unknown function 1 18028 18864
YP_009012683.1 NC_023694_p102 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 71433 73058
YP_009012605.1 NC_023694_p24 portal protein phrog_12 portal protein head and packaging 1 21999 23339
YP_009012601.1 NC_023694_p20 hypothetical protein phrog_35934 virion structural protein head and packaging 1 18864 19847
YP_009012594.1 NC_023694_p13 holin phrog_29195 holin lysis 1 13240 13728
YP_009012679.1 NC_023694_p98 hypothetical protein phrog_31149 unknown function unknown function 1 67378 67938
YP_009012625.1 NC_023694_p44 hypothetical protein phrog_12653 unknown function unknown function 1 42042 42242
YP_009012680.1 NC_023694_p99 hypothetical protein phrog_35090 unknown function unknown function 1 67978 70206
YP_009012669.1 NC_023694_p88 hypothetical protein phrog_19093 unknown function unknown function 1 63884 64357
YP_009012607.1 NC_023694_p26 prohead protease phrog_3270 head maturation protease head and packaging 1 24152 26290
YP_009012635.1 NC_023694_p54 hypothetical protein phrog_2152 unknown function unknown function 1 45647 46453
YP_009012665.1 NC_023694_p84 hypothetical protein phrog_7996 unknown function unknown function 1 62459 62719
YP_009012682.1 NC_023694_p101 hypothetical protein singleton unknown function unknown function 1 71260 71418
YP_009012684.1 NC_023694_p103 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 73353 73844
YP_009012613.1 NC_023694_p32 hypothetical protein phrog_22009 unknown function unknown function 1 29245 29754
YP_009012686.1 NC_023694_p105 hypothetical protein phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 74220 74774
YP_009012668.1 NC_023694_p87 hypothetical protein phrog_19093 unknown function unknown function 1 63317 63877
YP_009012676.1 NC_023694_p95 hypothetical protein phrog_29296 unknown function unknown function 1 66625 66756
YP_009012663.1 NC_023694_p82 hypothetical protein phrog_32781 unknown function unknown function 1 61476 61685
YP_009012590.1 NC_023694_p9 hypothetical protein singleton unknown function unknown function 1 11377 11601
YP_009012630.1 NC_023694_p49 hypothetical protein phrog_29055 unknown function unknown function 1 44379 44486
YP_009012664.1 NC_023694_p83 hypothetical protein phrog_7996 unknown function unknown function 1 61682 62455
YP_009012598.1 NC_023694_p17 hypothetical protein singleton unknown function unknown function 1 17508 17648
YP_009012655.1 NC_023694_p74 hypothetical protein singleton unknown function unknown function 1 58163 58312
YP_009012617.1 NC_023694_p36 tape measure protein phrog_4372 tail length tape measure protein tail 1 32036 37891
YP_009012593.1 NC_023694_p12 LysA phrog_880 endolysin lysis 1 12440 13237
YP_009012639.1 NC_023694_p58 hypothetical protein singleton unknown function unknown function 1 47162 47548
YP_009012602.1 NC_023694_p21 hypothetical protein phrog_7502 unknown function unknown function 1 19849 20922
YP_009012626.1 NC_023694_p45 hypothetical protein phrog_28747 unknown function unknown function 1 42342 42620
YP_009012681.1 NC_023694_p100 hypothetical protein phrog_35414 unknown function unknown function 1 70248 71021
YP_009012591.1 NC_023694_p10 hypothetical protein phrog_4259 unknown function unknown function 1 11626 11982
YP_009012652.1 NC_023694_p71 hypothetical protein phrog_4678 unknown function unknown function 1 53300 53851
YP_009012606.1 NC_023694_p25 hypothetical protein phrog_12541 unknown function unknown function 1 23341 23991
YP_009012645.1 NC_023694_p64 hypothetical protein phrog_6802 unknown function unknown function 1 48918 49439
YP_009012592.1 NC_023694_p11 hypothetical protein phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 11972 12382
YP_009012589.1 NC_023694_p8 tail fiber protein phrog_38417 hyaluronidase other 1 10518 11354
YP_009012671.1 NC_023694_p90 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 64603 65316
YP_009012595.1 NC_023694_p14 hypothetical protein phrog_4247 virion structural protein head and packaging 1 13767 14114
YP_009012634.1 NC_023694_p53 hypothetical protein phrog_30341 unknown function unknown function 1 45384 45608
YP_009012638.1 NC_023694_p57 hypothetical protein phrog_32424 unknown function unknown function 1 46930 47169
YP_009012643.1 NC_023694_p62 hypothetical protein phrog_34332 unknown function unknown function 1 48245 48499
YP_009012586.1 NC_023694_p5 tail fiber protein phrog_24580 tail fiber protein tail 1 6696 7574
YP_009012651.1 NC_023694_p70 hypothetical protein phrog_4695 unknown function unknown function 1 52419 53303
YP_009012596.1 NC_023694_p15 hypothetical protein phrog_24711 unknown function unknown function 1 14111 15727
YP_009012660.1 NC_023694_p79 hypothetical protein phrog_33255 unknown function unknown function 1 60415 60738
YP_009012618.1 NC_023694_p37 hypothetical protein phrog_33 distal tail protein Dit tail 1 37888 38715
YP_009012646.1 NC_023694_p65 hypothetical protein phrog_4282 unknown function unknown function 1 49493 50125
YP_009012654.1 NC_023694_p73 hypothetical protein phrog_19221 unknown function unknown function 1 57777 58157
YP_009012587.1 NC_023694_p6 tail fiber protein phrog_15881 tail protein tail 1 7590 10160
YP_009012648.1 NC_023694_p67 hypothetical protein phrog_4079 unknown function unknown function 1 50642 51319
YP_009012623.1 NC_023694_p42 hypothetical protein singleton unknown function unknown function 1 41451 41741
YP_009012670.1 NC_023694_p89 hypothetical protein phrog_37300 unknown function unknown function 1 64370 64606
YP_009012629.1 NC_023694_p48 hypothetical protein phrog_26966 unknown function unknown function 1 44097 44333
YP_009012612.1 NC_023694_p31 head protein phrog_2645 major tail protein tail 1 28428 29231
YP_009012633.1 NC_023694_p52 hypothetical protein phrog_32807 unknown function unknown function 1 45081 45365
YP_009012667.1 NC_023694_p86 hypothetical protein phrog_7996 unknown function unknown function 1 63028 63312
YP_009012685.1 NC_023694_p104 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 73946 74275
YP_009012584.1 NC_023694_p3 tail fiber protein phrog_11419 tail fiber protein tail 1 4035 5780
YP_009012649.1 NC_023694_p68 hypothetical protein phrog_6038 unknown function unknown function 1 51359 51502
YP_009012614.1 NC_023694_p33 hypothetical protein phrog_23770 unknown function unknown function 1 29751 30818
YP_009012622.1 NC_023694_p41 hypothetical protein phrog_5818 unknown function unknown function 1 40906 41271
YP_009012616.1 NC_023694_p35 structural protein phrog_5 tail completion or Neck1 protein connector 1 31659 32039
YP_009012583.1 NC_023694_p2 tail fiber protein phrog_27786 tail spike protein tail 1 1771 3999
YP_009012611.1 NC_023694_p30 hypothetical protein phrog_4338 unknown function unknown function 1 27855 28409
YP_009012642.1 NC_023694_p61 hypothetical protein singleton unknown function unknown function 1 48067 48252
YP_009012621.1 NC_023694_p40 hypothetical protein phrog_33583 unknown function unknown function 1 40572 40913
YP_009012661.1 NC_023694_p80 hypothetical protein phrog_7996 unknown function unknown function 1 60766 61053
YP_009012585.1 NC_023694_p4 hypothetical protein phrog_18370 unknown function unknown function 1 5777 6637
YP_009012615.1 NC_023694_p34 LysB phrog_102 endolysin lysis 1 30846 31637
YP_009012647.1 NC_023694_p66 hypothetical protein phrog_7539 unknown function unknown function 1 50294 50566
YP_009012636.1 NC_023694_p55 hypothetical protein phrog_25998 unknown function unknown function 1 46490 46744
YP_009012650.1 NC_023694_p69 hypothetical protein phrog_2152 unknown function unknown function 1 51514 52407
YP_009012628.1 NC_023694_p47 hypothetical protein phrog_32469 unknown function unknown function 1 43752 44030
YP_009012666.1 NC_023694_p85 hypothetical protein phrog_7996 unknown function unknown function 1 62716 63015
YP_009012677.1 NC_023694_p96 hypothetical protein singleton unknown function unknown function 1 66807 66938
YP_009012657.1 NC_023694_p76 hypothetical protein singleton unknown function unknown function 1 59097 59213
YP_009012658.1 NC_023694_p77 hypothetical protein phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 59210 59797
YP_009012659.1 NC_023694_p78 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 59837 60418
YP_009012609.1 NC_023694_p28 structural protein phrog_78 tail terminator connector 1 26618 26920
YP_009012656.1 NC_023694_p75 hypothetical protein phrog_19221 unknown function unknown function 1 58350 59084
YP_009012678.1 NC_023694_p97 hypothetical protein singleton unknown function unknown function 1 67088 67375
YP_009012619.1 NC_023694_p38 hypothetical protein phrog_538 minor tail protein tail 1 38719 40113
YP_009012662.1 NC_023694_p81 hypothetical protein phrog_7996 unknown function unknown function 1 61081 61374