Genomic map of Mycobacterium phage Violet (NC_023695)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023695
Definition
Mycobacterium phage Violet, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
52481
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
63.84
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009012730.1 NC_023695_p42 DNA pol I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32752 34578
YP_009012765.1 NC_023695_p77 hypothetical protein phrog_2093 unknown function unknown function -1 48438 48566
YP_009012693.1 NC_023695_p5 hypothetical protein phrog_553 minor tail protein tail 1 2907 3617
YP_009012762.1 NC_023695_p74 hypothetical protein phrog_1387 unknown function unknown function -1 47889 48089
YP_009012701.1 NC_023695_p13 scaffolding phrog_233 head scaffolding protein head and packaging 1 11633 12145
YP_009012711.1 NC_023695_p23 tapemeasure phrog_305 tail length tape measure protein tail 1 16915 19386
YP_009012778.1 NC_023695_p90 hypothetical protein phrog_15028 unknown function unknown function 1 51803 52384
YP_009012691.1 NC_023695_p3 hypothetical protein phrog_226 minor tail protein tail 1 1079 1519
YP_009012770.1 NC_023695_p82 hypothetical protein phrog_6842 unknown function unknown function -1 49893 50228
YP_009012746.1 NC_023695_p58 Endo VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 42059 42553
YP_009012705.1 NC_023695_p17 hypothetical protein phrog_320 head closure Hc1 connector 1 13915 14277
YP_009012745.1 NC_023695_p57 DNA methylase phrog_67 DNA methyltransferase other -1 40485 42062
YP_009012715.1 NC_023695_p27 hypothetical protein phrog_352 minor tail protein tail 1 23486 23932
YP_009012772.1 NC_023695_p84 hypothetical protein singleton unknown function unknown function -1 50375 50500
YP_009012742.1 NC_023695_p54 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39676 40191
YP_009012726.1 NC_023695_p38 hypothetical protein phrog_2035 unknown function unknown function -1 31829 32008
YP_009012713.1 NC_023695_p25 minor tail subunit phrog_1543 minor tail protein tail 1 21464 21646
YP_009012712.1 NC_023695_p24 minor tail subunit phrog_106 minor tail protein tail 1 19410 21467
YP_009012775.1 NC_023695_p87 hypothetical protein phrog_828 unknown function unknown function 1 50920 51123
YP_009012720.1 NC_023695_p32 hypothetical protein phrog_644 unknown function unknown function 1 27984 28385
YP_009012755.1 NC_023695_p67 hypothetical protein phrog_1311 unknown function unknown function -1 45495 45632
YP_009012774.1 NC_023695_p86 hypothetical protein phrog_2212 unknown function unknown function -1 50729 50848
YP_009012692.1 NC_023695_p4 hypothetical protein phrog_1197 tail protein tail 1 1827 2897
YP_009012710.1 NC_023695_p22 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16104 16481
YP_009012743.1 NC_023695_p55 hypothetical protein phrog_1783 unknown function unknown function -1 40170 40328
YP_009012729.1 NC_023695_p41 hypothetical protein phrog_383 unknown function unknown function -1 32372 32731
YP_009012694.1 NC_023695_p6 hypothetical protein phrog_1718 tail protein tail 1 3631 3891
YP_009012759.1 NC_023695_p71 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47148 47447
YP_009012735.1 NC_023695_p47 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35768 36559
YP_009012739.1 NC_023695_p51 hypothetical protein phrog_474 phosphofructokinase other -1 38588 38989
YP_009012698.1 NC_023695_p10 terminase phrog_9 terminase large subunit head and packaging 1 6546 9257
YP_009012714.1 NC_023695_p26 minor tail subunit phrog_110 minor tail protein tail 1 21646 23448
YP_009012704.1 NC_023695_p16 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13466 13915
YP_009012753.1 NC_023695_p65 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44475 44657
YP_009012709.1 NC_023695_p21 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16104 16903
YP_009012724.1 NC_023695_p36 integrase phrog_95 integrase integration and excision 1 29937 31439
YP_009012777.1 NC_023695_p89 hypothetical protein phrog_3574 unknown function unknown function 1 51521 51709
YP_009012731.1 NC_023695_p43 hypothetical protein phrog_6173 unknown function unknown function -1 34601 34843
YP_009012756.1 NC_023695_p68 hypothetical protein phrog_658 unknown function unknown function -1 45632 45940
YP_009012737.1 NC_023695_p49 hypothetical protein phrog_221 metallo-phosphoesterase other -1 36697 38415
YP_009012708.1 NC_023695_p20 major tail subunit phrog_117 major tail protein tail 1 15131 15982
YP_009012749.1 NC_023695_p61 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42922 43731
YP_009012697.1 NC_023695_p9 lysin B phrog_102 endolysin lysis 1 5558 6526
YP_009012700.1 NC_023695_p12 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10693 11574
YP_009012719.1 NC_023695_p31 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 26491 27975
YP_009012703.1 NC_023695_p15 hypothetical protein phrog_1857 head-tail connector protein connector 1 13239 13466
YP_009012702.1 NC_023695_p14 major capsid phrog_10 major head protein head and packaging 1 12156 13160
YP_009012736.1 NC_023695_p48 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36552 36692
YP_009012716.1 NC_023695_p28 hypothetical protein phrog_981 minor tail protein tail 1 23929 24276
YP_009012773.1 NC_023695_p85 hypothetical protein phrog_10288 unknown function unknown function -1 50461 50700
YP_009012764.1 NC_023695_p76 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48274 48441
YP_009012727.1 NC_023695_p39 hypothetical protein phrog_1860 unknown function unknown function -1 31996 32091
YP_009012752.1 NC_023695_p64 hypothetical protein phrog_2184 unknown function unknown function -1 44151 44471
YP_009012699.1 NC_023695_p11 portal phrog_104 portal protein head and packaging 1 9254 10696
YP_009012748.1 NC_023695_p60 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42656 42922
YP_009012696.1 NC_023695_p8 lysin A phrog_317 endolysin lysis 1 4156 5568
YP_009012758.1 NC_023695_p70 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46374 46886
YP_009012706.1 NC_023695_p18 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14277 14672
YP_009012734.1 NC_023695_p46 hypothetical protein phrog_499 unknown function unknown function -1 35589 35771
YP_009012776.1 NC_023695_p88 hypothetical protein singleton unknown function unknown function 1 51120 51317
YP_009012741.1 NC_023695_p53 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39309 39887
YP_009012740.1 NC_023695_p52 hypothetical protein phrog_5618 unknown function unknown function -1 38986 39312
YP_009012744.1 NC_023695_p56 hypothetical protein phrog_397 unknown function unknown function -1 40325 40459
YP_009012723.1 NC_023695_p35 hypothetical protein phrog_411 unknown function unknown function 1 29494 29790
YP_009012769.1 NC_023695_p81 hypothetical protein phrog_26173 unknown function unknown function -1 49588 49932
YP_009012728.1 NC_023695_p40 hypothetical protein phrog_1971 unknown function unknown function -1 32088 32375
YP_009012768.1 NC_023695_p80 hypothetical protein phrog_2985 unknown function unknown function -1 49276 49431
YP_009012754.1 NC_023695_p66 RecB-like phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44684 45502
YP_009012751.1 NC_023695_p63 hypothetical protein phrog_520 unknown function unknown function -1 43861 44154
YP_009012750.1 NC_023695_p62 hypothetical protein phrog_1705 unknown function unknown function -1 43718 43864
YP_009012761.1 NC_023695_p73 hypothetical protein phrog_6510 unknown function unknown function -1 47710 47892
YP_009012707.1 NC_023695_p19 hypothetical protein phrog_123 tail terminator connector 1 14676 15122
YP_009012690.1 NC_023695_p2 HNH endonuclease domain phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 748 1044
YP_009012689.1 NC_023695_p1 hypothetical protein phrog_4649 unknown function unknown function 1 599 751
YP_009012733.1 NC_023695_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35101 35592
YP_009012732.1 NC_023695_p44 hypothetical protein phrog_1781 unknown function unknown function -1 34840 35070
YP_009012747.1 NC_023695_p59 hypothetical protein phrog_1019 unknown function unknown function -1 42540 42659
YP_009012757.1 NC_023695_p69 hypothetical protein phrog_1809 unknown function unknown function -1 45937 46332
YP_009012721.1 NC_023695_p33 hypothetical protein phrog_1560 unknown function unknown function 1 28394 28585
YP_009012695.1 NC_023695_p7 hypothetical protein phrog_747 unknown function unknown function 1 3899 4156
YP_009012722.1 NC_023695_p34 hypothetical protein phrog_754 minor tail protein tail 1 28585 29373
YP_009012763.1 NC_023695_p75 hypothetical protein phrog_1155 unknown function unknown function -1 48086 48274
YP_009012760.1 NC_023695_p72 hypothetical protein phrog_1720 unknown function unknown function -1 47444 47713
YP_009012767.1 NC_023695_p79 hypothetical protein singleton unknown function unknown function -1 49097 49231
YP_009012718.1 NC_023695_p30 hypothetical protein phrog_346 minor tail protein tail 1 24645 26498
YP_009012717.1 NC_023695_p29 hypothetical protein phrog_1397 unknown function unknown function 1 24273 24620
YP_009012725.1 NC_023695_p37 hypothetical protein phrog_1966 unknown function unknown function -1 31560 31832
YP_009012738.1 NC_023695_p50 hypothetical protein phrog_1503 unknown function unknown function -1 38412 38591
YP_009012771.1 NC_023695_p83 hypothetical protein singleton unknown function unknown function -1 50254 50394
YP_009012766.1 NC_023695_p78 hypothetical protein phrog_932 unknown function unknown function -1 48587 48736