| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023697 |
Definition |
Mycobacterium phage Babsiella, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Chebruvirinae; Brujitavirus. |
DB of origin |
REFSEQ |
Length |
48420 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
78 |
%GC |
67.07 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009013042.1 | NC_023697_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22893 | 23063 |
| YP_009013047.1 | NC_023697_p30 | hypothetical protein | phrog_8245 | HicB-like antitoxin | moron, auxiliary metabolic gene and host takeover | -1 | 25983 | 26423 |
| YP_009013034.1 | NC_023697_p17 | minor tail | phrog_106 | minor tail protein | tail | 1 | 14536 | 16263 |
| YP_009013082.1 | NC_023697_p65 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 41599 | 42135 |
| YP_009013086.1 | NC_023697_p69 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 43709 | 44107 |
| YP_009013050.2 | NC_023697_p33 | integrase(Y-Int) | phrog_1 | integrase | integration and excision | -1 | 27151 | 28104 |
| YP_009013026.1 | NC_023697_p9 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 6984 | 7529 |
| YP_009013058.1 | NC_023697_p41 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 31234 | 31479 |
| YP_009013083.1 | NC_023697_p66 | hypothetical protein | phrog_20896 | unknown function | unknown function | 1 | 42132 | 42428 |
| YP_009013022.1 | NC_023697_p5 | hypothetical protein | phrog_21017 | unknown function | unknown function | 1 | 3709 | 4140 |
| YP_009013094.1 | NC_023697_p77 | hypothetical protein | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 47291 | 47992 |
| YP_009013046.1 | NC_023697_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25555 | 25917 |
| YP_009013020.1 | NC_023697_p3 | hypothetical protein | phrog_16366 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 2103 | 2291 |
| YP_009013065.1 | NC_023697_p48 | RecT | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 33402 | 34397 |
| YP_009013064.1 | NC_023697_p47 | Rec E | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 32479 | 33405 |
| YP_009013048.1 | NC_023697_p31 | HicA | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | -1 | 26427 | 26642 |
| YP_009013059.1 | NC_023697_p42 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 31476 | 31751 |
| YP_009013095.1 | NC_023697_p78 | hypothetical protein | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47992 | 48282 |
| YP_009013068.1 | NC_023697_p51 | RusA | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35700 | 36206 |
| YP_009013070.1 | NC_023697_p53 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 36439 | 36717 |
| YP_009013074.1 | NC_023697_p57 | hypothetical protein | phrog_8485 | unknown function | unknown function | -1 | 38684 | 39061 |
| YP_009013028.1 | NC_023697_p11 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7921 | 8361 |
| YP_009013035.1 | NC_023697_p18 | hypothetical protein | phrog_6832 | unknown function | unknown function | 1 | 16263 | 16433 |
| YP_009013053.1 | NC_023697_p36 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 28877 | 29746 |
| YP_009013077.1 | NC_023697_p60 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 39552 | 39869 |
| YP_009013051.1 | NC_023697_p34 | hypothetical protein | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28175 | 28570 |
| YP_009013036.1 | NC_023697_p19 | minor tail | phrog_110 | minor tail protein | tail | 1 | 16430 | 18163 |
| YP_009013052.1 | NC_023697_p35 | Xis | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 28713 | 28880 |
| YP_009013072.1 | NC_023697_p55 | DNA methylase domain | singleton | unknown function | unknown function | 1 | 37252 | 37560 |
| YP_009013078.1 | NC_023697_p61 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 39866 | 40300 |
| YP_009013041.1 | NC_023697_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22531 | 22893 |
| YP_009013093.1 | NC_023697_p76 | hypothetical protein | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 46374 | 47294 |
| YP_009013031.1 | NC_023697_p14 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 9775 | 10768 |
| YP_009013038.1 | NC_023697_p21 | hypothetical protein | phrog_3493 | minor tail protein | tail | 1 | 19025 | 21313 |
| YP_009013027.1 | NC_023697_p10 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 7526 | 7921 |
| YP_009013090.1 | NC_023697_p73 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 45112 | 45540 |
| YP_009013088.1 | NC_023697_p71 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 44547 | 44753 |
| YP_009013039.1 | NC_023697_p22 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21313 | 22350 |
| YP_009013075.1 | NC_023697_p58 | hypothetical protein | phrog_8611 | unknown function | unknown function | -1 | 39068 | 39400 |
| YP_009013025.1 | NC_023697_p8 | hypothetical protein | phrog_9538 | head-tail connector protein | connector | 1 | 6725 | 7003 |
| YP_009013076.1 | NC_023697_p59 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 39433 | 39555 |
| YP_009013023.1 | NC_023697_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 4163 | 5104 |
| YP_009013073.1 | NC_023697_p56 | hypothetical protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 38530 | 38691 |
| YP_009013044.1 | NC_023697_p27 | LysB | phrog_102 | endolysin | lysis | 1 | 24108 | 25286 |
| YP_009013019.1 | NC_023697_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 521 | 2080 |
| YP_009013092.1 | NC_023697_p75 | hypothetical protein | phrog_6608 | methyltransferase | other | 1 | 45785 | 46384 |
| YP_009013049.1 | NC_023697_p32 | TM2 domain | phrog_21924 | unknown function | unknown function | -1 | 26718 | 27107 |
| YP_009013062.1 | NC_023697_p45 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 32115 | 32255 |
| YP_009013029.1 | NC_023697_p12 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 8354 | 8773 |
| YP_009013057.1 | NC_023697_p40 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 30786 | 31223 |
| YP_009013091.1 | NC_023697_p74 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 45540 | 45788 |
| YP_009013087.1 | NC_023697_p70 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 44166 | 44369 |
| YP_009013084.1 | NC_023697_p67 | peptidase | phrog_908 | unknown function | unknown function | 1 | 42425 | 43327 |
| YP_009013080.1 | NC_023697_p63 | hypothetical protein | phrog_25330 | unknown function | unknown function | 1 | 40488 | 40664 |
| YP_009013066.1 | NC_023697_p49 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 34394 | 34642 |
| YP_009013067.1 | NC_023697_p50 | FtsK domain | phrog_6152 | unknown function | unknown function | 1 | 34639 | 35703 |
| YP_009013060.1 | NC_023697_p43 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 31751 | 31942 |
| YP_009013056.1 | NC_023697_p39 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 30203 | 30715 |
| YP_009013063.1 | NC_023697_p46 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 32252 | 32482 |
| YP_009013081.1 | NC_023697_p64 | hypothetical protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 40664 | 41602 |
| YP_009013030.1 | NC_023697_p13 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 8812 | 9663 |
| YP_009013037.1 | NC_023697_p20 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 18177 | 19028 |
| YP_009013021.1 | NC_023697_p4 | portal | phrog_12 | portal protein | head and packaging | 1 | 2288 | 3709 |
| YP_009013085.1 | NC_023697_p68 | hypothetical protein | phrog_17037 | unknown function | unknown function | 1 | 43446 | 43589 |
| YP_009013032.1 | NC_023697_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9775 | 10269 |
| YP_009013055.1 | NC_023697_p38 | hypothetical protein | phrog_10253 | unknown function | unknown function | 1 | 30039 | 30206 |
| YP_009013033.1 | NC_023697_p16 | tapemeasure | phrog_2337 | tail length tape measure protein | tail | 1 | 10772 | 14539 |
| YP_009013061.1 | NC_023697_p44 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 31939 | 32118 |
| YP_009013079.1 | NC_023697_p62 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 40293 | 40445 |
| YP_009013024.1 | NC_023697_p7 | capsid | phrog_10 | major head protein | head and packaging | 1 | 5101 | 6648 |
| YP_009013043.1 | NC_023697_p26 | LysA | phrog_1512 | endolysin | lysis | 1 | 23158 | 24111 |
| YP_009013018.1 | NC_023697_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 67 | 540 |
| YP_009013045.1 | NC_023697_p28 | hypothetical protein | phrog_443 | holin | lysis | 1 | 25313 | 25558 |
| YP_009013089.1 | NC_023697_p72 | Alp A | phrog_20391 | unknown function | unknown function | 1 | 44779 | 45108 |
| YP_009013069.1 | NC_023697_p52 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 36200 | 36442 |
| YP_009013071.1 | NC_023697_p54 | DNA methylase domain | phrog_116 | DNA methyltransferase | other | 1 | 36714 | 38561 |
| YP_009013054.1 | NC_023697_p37 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 29743 | 30042 |
| YP_009013040.1 | NC_023697_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22365 | 22514 |