Genomic map of Mycobacterium virus Avani (NC_023698)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023698
Definition
Mycobacterium phage Avani, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
54470
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
107
%GC
60.97
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009013178.1 NC_023698_p83 hypothetical protein phrog_2080 unknown function unknown function 1 45436 45696
YP_009013114.1 NC_023698_p19 minor tail phrog_110 minor tail protein tail 1 13744 15408
YP_009013149.1 NC_023698_p54 HTH DNA binding ( Cro) phrog_3642 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 34894 35139
YP_009013197.1 NC_023698_p102 hypothetical protein phrog_1694 unknown function unknown function 1 50962 51120
YP_009013110.1 NC_023698_p15 tail assembly chaperone phrog_21995 tail assembly chaperone tail 1 8371 9272
YP_009013154.1 NC_023698_p59 hypothetical protein singleton unknown function unknown function 1 36848 37396
YP_009013119.1 NC_023698_p24 minor tail phrog_346 minor tail protein tail 1 17093 19642
YP_009013147.1 NC_023698_p52 hypothetical protein phrog_7613 unknown function unknown function -1 34019 34165
YP_009013127.1 NC_023698_p32 hypothetical protein phrog_1172 unknown function unknown function 1 24801 24938
YP_009013115.1 NC_023698_p20 minor tail phrog_8122 minor tail protein tail 1 15408 15773
YP_009013177.1 NC_023698_p82 hypothetical protein phrog_29781 unknown function unknown function 1 45206 45439
YP_009013136.1 NC_023698_p41 hypothetical protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover -1 29495 29893
YP_009013157.1 NC_023698_p62 hypothetical protein phrog_3416 unknown function unknown function 1 38318 38998
YP_009013192.1 NC_023698_p97 hypothetical protein phrog_2278 unknown function unknown function 1 48825 49061
YP_009013128.1 NC_023698_p33 hypothetical protein phrog_19498 unknown function unknown function 1 25007 25147
YP_009013139.1 NC_023698_p44 hypothetical protein phrog_2437 unknown function unknown function -1 30288 30455
YP_009013131.1 NC_023698_p36 LysB phrog_102 endolysin lysis 1 26807 27880
YP_009013122.1 NC_023698_p27 hypothetical protein phrog_644 unknown function unknown function 1 23475 23906
YP_009013198.1 NC_023698_p103 transcriptional regulator (AlpA-like) phrog_3813 unknown function unknown function 1 51117 51374
YP_009013193.1 NC_023698_p98 hypothetical protein phrog_2247 unknown function unknown function 1 49054 49323
YP_009013112.1 NC_023698_p17 tapemeasure phrog_971 endolysin lysis 1 9265 12816
YP_009013183.1 NC_023698_p88 hypothetical protein phrog_722 unknown function unknown function 1 46792 47127
YP_009013181.1 NC_023698_p86 hypothetical protein phrog_1546 unknown function unknown function 1 46087 46437
YP_009013124.1 NC_023698_p29 hypothetical protein phrog_411 unknown function unknown function 1 24218 24514
YP_009013132.1 NC_023698_p37 holin phrog_443 holin lysis 1 28000 28257
YP_009013152.1 NC_023698_p57 hypothetical protein phrog_2025 unknown function unknown function 1 36353 36568
YP_009013129.1 NC_023698_p34 hypothetical protein phrog_3888 unknown function unknown function 1 25152 25445
YP_009013186.1 NC_023698_p91 hypothetical protein phrog_722 unknown function unknown function 1 47610 47966
YP_009013099.1 NC_023698_p4 portal phrog_104 portal protein head and packaging 1 2180 3604
YP_009013146.1 NC_023698_p51 hypothetical protein phrog_1948 unknown function unknown function -1 33453 33905
YP_009013135.1 NC_023698_p40 hypothetical protein phrog_3798 unknown function unknown function 1 28789 29178
YP_009013137.1 NC_023698_p42 hypothetical protein phrog_7480 unknown function unknown function -1 29963 30169
YP_009013108.1 NC_023698_p13 hypothetical protein phrog_123 tail terminator connector 1 7213 7617
YP_009013118.1 NC_023698_p23 minor tail phrog_18521 minor tail protein tail 1 16395 17096
YP_009013134.1 NC_023698_p39 hypothetical protein phrog_6071 unknown function unknown function 1 28553 28789
YP_009013158.1 NC_023698_p63 hypothetical protein phrog_1849 unknown function unknown function 1 39078 39377
YP_009013103.1 NC_023698_p8 hypothetical protein phrog_14967 unknown function unknown function 1 5825 5968
YP_009013100.1 NC_023698_p5 capsid maturation protease phrog_193 head maturation protease head and packaging 1 3585 4229
YP_009013111.1 NC_023698_p16 tail assembly chaperone phrog_16781 tail assembly chaperone tail 1 8371 8982
YP_009013194.1 NC_023698_p99 hypothetical protein phrog_908 unknown function unknown function 1 49320 50006
YP_009013166.1 NC_023698_p71 hypothetical protein phrog_2060 DNA methyltransferase other 1 41759 42094
YP_009013096.1 NC_023698_p1 HNH endonuclease domain phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38 370
YP_009013107.1 NC_023698_p12 hypothetical protein phrog_387 neck protein connector 1 6948 7220
YP_009013161.1 NC_023698_p66 hypothetical protein phrog_2096 unknown function unknown function 1 40258 40743
YP_009013164.1 NC_023698_p69 hypothetical protein phrog_2078 unknown function unknown function 1 41380 41532
YP_009013188.1 NC_023698_p93 hypothetical protein phrog_1091 unknown function unknown function 1 48223 48402
YP_009013106.1 NC_023698_p11 hypothetical protein phrog_16796 unknown function unknown function 1 6788 6964
YP_009013202.1 NC_023698_p107 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 53751 54359
YP_009013141.1 NC_023698_p46 hypothetical protein phrog_22001 unknown function unknown function -1 30688 30879
YP_009013195.1 NC_023698_p100 hypothetical protein phrog_8604 unknown function unknown function 1 50003 50605
YP_009013138.1 NC_023698_p43 hypothetical protein phrog_3693 unknown function unknown function -1 30166 30288
YP_009013133.1 NC_023698_p38 hypothetical protein phrog_4511 unknown function unknown function 1 28254 28553
YP_009013116.1 NC_023698_p21 minor tail phrog_17043 minor tail protein tail 1 15770 16093
YP_009013150.1 NC_023698_p55 hypothetical protein phrog_130 anti-repressor Ant transcription regulation 1 35200 36060
YP_009013185.1 NC_023698_p90 hypothetical protein phrog_647 unknown function unknown function 1 47333 47617
YP_009013153.1 NC_023698_p58 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 36654 36851
YP_009013140.1 NC_023698_p45 hypothetical protein phrog_5648 unknown function unknown function -1 30455 30691
YP_009013174.1 NC_023698_p79 hypothetical protein phrog_1311 unknown function unknown function 1 44144 44293
YP_009013168.1 NC_023698_p73 HNH endonuclease domain phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42666 43022
YP_009013098.1 NC_023698_p3 hypothetical protein phrog_2 terminase large subunit head and packaging 1 663 2183
YP_009013101.1 NC_023698_p6 scaffolding phrog_3760 head scaffolding protein head and packaging 1 4307 4855
YP_009013130.1 NC_023698_p35 LysA phrog_700 endolysin lysis 1 25446 26810
YP_009013187.1 NC_023698_p92 hypothetical protein phrog_3472 unknown function unknown function 1 47963 48226
YP_009013163.1 NC_023698_p68 HTH DNA binding phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 41015 41380
YP_009013097.1 NC_023698_p2 terminase, small subunit phrog_4479 terminase small subunit head and packaging 1 437 691
YP_009013143.1 NC_023698_p48 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31400 31594
YP_009013167.1 NC_023698_p72 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 42091 42669
YP_009013175.1 NC_023698_p80 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 44294 44848
YP_009013159.1 NC_023698_p64 hypothetical protein phrog_658 unknown function unknown function 1 39374 39766
YP_009013182.1 NC_023698_p87 HIT family hydrolase phrog_3962 unknown function unknown function 1 46430 46795
YP_009013176.1 NC_023698_p81 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 44848 45222
YP_009013121.1 NC_023698_p26 hypothetical protein phrog_553 minor tail protein tail 1 22464 23408
YP_009013162.1 NC_023698_p67 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 40740 41018
YP_009013102.1 NC_023698_p7 major capsid phrog_10 major head protein head and packaging 1 4878 5813
YP_009013105.1 NC_023698_p10 hypothetical protein phrog_763 head-tail adaptor connector 1 6438 6791
YP_009013201.1 NC_023698_p106 galactosyl transferase phrog_1721 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 53056 53754
YP_009013170.1 NC_023698_p75 methylase phrog_67 DNA methyltransferase other 1 43135 43713
YP_009013191.1 NC_023698_p96 hypothetical protein phrog_4126 unknown function unknown function 1 48706 48828
YP_009013109.1 NC_023698_p14 major tail phrog_117 major tail protein tail 1 7679 8272
YP_009013142.1 NC_023698_p47 hypothetical protein phrog_16880 endonuclease DNA, RNA and nucleotide metabolism -1 30876 31403
YP_009013179.1 NC_023698_p84 hypothetical protein phrog_2730 unknown function unknown function 1 45696 45899
YP_009013104.1 NC_023698_p9 hypothetical protein phrog_1290 head-tail adaptor connector 1 5986 6441
YP_009013184.1 NC_023698_p89 hypothetical protein phrog_3447 unknown function unknown function 1 47124 47336
YP_009013173.1 NC_023698_p78 hypothetical protein phrog_2070 unknown function unknown function 1 43995 44147
YP_009013145.1 NC_023698_p50 integrase, Y-Int phrog_1 integrase integration and excision 1 32075 33376
YP_009013151.1 NC_023698_p56 hypothetical protein phrog_5253 unknown function unknown function 1 36057 36356
YP_009013120.1 NC_023698_p25 D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19639 22464
YP_009013171.1 NC_023698_p76 hypothetical protein phrog_6573 unknown function unknown function 1 43751 43852
YP_009013172.1 NC_023698_p77 hypothetical protein phrog_2704 unknown function unknown function 1 43852 43998
YP_009013200.1 NC_023698_p105 glycosyl transferase/methyl transferase phrog_8858 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 51893 53059
YP_009013156.1 NC_023698_p61 hypothetical protein phrog_1797 unknown function unknown function 1 37581 38282
YP_009013189.1 NC_023698_p94 hypothetical protein phrog_1545 unknown function unknown function 1 48402 48539
YP_009013117.1 NC_023698_p22 minor tail phrog_17345 minor tail protein tail 1 16090 16398
YP_009013125.1 NC_023698_p30 hypothetical protein phrog_932 unknown function unknown function 1 24521 24667
YP_009013126.1 NC_023698_p31 hypothetical protein phrog_13008 unknown function unknown function 1 24664 24804
YP_009013148.1 NC_023698_p53 immunity repressor phrog_3949 transcriptional repressor transcription regulation -1 34168 34662
YP_009013165.1 NC_023698_p70 hypothetical protein phrog_1834 unknown function unknown function 1 41532 41762
YP_009013199.1 NC_023698_p104 hypothetical protein phrog_17545 unknown function unknown function -1 51371 51841
YP_009013123.1 NC_023698_p28 transcriptional regulator (AlpA-like) phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 23903 24082
YP_009013155.1 NC_023698_p60 hypothetical protein phrog_1816 unknown function unknown function 1 37393 37584
YP_009013169.1 NC_023698_p74 hypothetical protein singleton unknown function unknown function 1 43019 43138
YP_009013113.1 NC_023698_p18 minor tail phrog_106 minor tail protein tail 1 12813 13742
YP_009013144.1 NC_023698_p49 hypothetical protein phrog_10321 unknown function unknown function -1 31664 31816
YP_009013196.1 NC_023698_p101 hypothetical protein phrog_1869 unknown function unknown function 1 50792 50956
YP_009013160.1 NC_023698_p65 WhiB phrog_1333 unknown function unknown function 1 39767 40261
YP_009013180.1 NC_023698_p85 hypothetical protein phrog_1943 unknown function unknown function 1 45896 46090
YP_009013190.1 NC_023698_p95 hypothetical protein phrog_9881 unknown function unknown function 1 48539 48709