Genomic map of Mycobacterium virus SG4 (NC_023699)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023699
Definition
Mycobacterium phage SG4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
59016
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
61.87
Number of singletons
1
Number of paralogs
6

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009013286.1 NC_023699_p84 hypothetical protein phrog_647 unknown function unknown function 1 50324 50698
YP_009013234.1 NC_023699_p32 LysB phrog_102 endolysin lysis 1 28164 29234
YP_009013222.1 NC_023699_p20 hypothetical protein phrog_2106 minor tail protein tail 1 21965 23131
YP_009013289.1 NC_023699_p87 hypothetical protein phrog_13181 unknown function unknown function 1 51248 51451
YP_009013260.1 NC_023699_p58 hypothetical protein phrog_2078 unknown function unknown function 1 40086 40241
YP_009013221.1 NC_023699_p19 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 20082 21968
YP_009013245.1 NC_023699_p43 hypothetical protein phrog_1948 unknown function unknown function -1 33460 33912
YP_009013276.1 NC_023699_p74 hypothetical protein phrog_2730 unknown function unknown function 1 46723 46926
YP_009013232.1 NC_023699_p30 LysA phrog_700 endolysin lysis 1 26651 27922
YP_009013272.1 NC_023699_p70 hypothetical protein phrog_67 DNA methyltransferase other 1 43702 45480
YP_009013299.1 NC_023699_p97 hypothetical protein phrog_1694 unknown function unknown function 1 54587 54745
YP_009013263.1 NC_023699_p61 hypothetical protein phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 40725 41303
YP_009013240.1 NC_023699_p38 hypothetical protein phrog_1791 unknown function unknown function 1 31042 31260
YP_009013296.1 NC_023699_p94 hypothetical protein phrog_908 unknown function unknown function 1 52945 53631
YP_009013251.1 NC_023699_p49 hypothetical protein phrog_780 unknown function unknown function 1 36037 36267
YP_009013302.1 NC_023699_p100 hypothetical protein phrog_1385 unknown function unknown function 1 55394 55636
YP_009013273.1 NC_023699_p71 hypothetical protein phrog_2451 unknown function unknown function 1 45477 45611
YP_009013242.1 NC_023699_p40 integrase phrog_1 integrase integration and excision 1 31653 32771
YP_009013258.1 NC_023699_p56 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 39440 39724
YP_009013215.1 NC_023699_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8576 9127
YP_009013211.1 NC_023699_p9 hypothetical protein phrog_1929 head-tail connector protein connector 1 6781 7110
YP_009013213.1 NC_023699_p11 major tail subunit phrog_476 major tail protein tail 1 7559 8440
YP_009013293.1 NC_023699_p91 hypothetical protein phrog_1545 unknown function unknown function 1 52200 52337
YP_009013225.1 NC_023699_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23780 24418
YP_009013264.1 NC_023699_p62 hypothetical protein phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41300 41665
YP_009013228.1 NC_023699_p26 hypothetical protein phrog_411 unknown function unknown function 1 25747 26031
YP_009013220.1 NC_023699_p18 minor tail subunit phrog_346 minor tail protein tail 1 17548 20085
YP_009013255.1 NC_023699_p53 Hyp phrog_658 unknown function unknown function 1 38120 38467
YP_009013282.1 NC_023699_p80 hypothetical protein phrog_3447 unknown function unknown function 1 49214 49456
YP_009013241.1 NC_023699_p39 hypothetical protein phrog_1839 unknown function unknown function 1 31253 31345
YP_009013288.1 NC_023699_p86 hypothetical protein phrog_647 unknown function unknown function 1 50874 51251
YP_009013243.1 NC_023699_p41 hypothetical protein phrog_1213 RelE-like toxin moron, auxiliary metabolic gene and host takeover 1 32893 33204
YP_009013237.1 NC_023699_p35 hypothetical protein phrog_2004 unknown function unknown function 1 29910 30143
YP_009013235.1 NC_023699_p33 holin phrog_443 holin lysis 1 29281 29514
YP_009013278.1 NC_023699_p76 hypothetical protein phrog_1573 DNA methyltransferase other 1 47114 47569
YP_009013284.1 NC_023699_p82 hypothetical protein phrog_722 unknown function unknown function 1 49730 49978
YP_009013295.1 NC_023699_p93 hypothetical protein phrog_2247 unknown function unknown function 1 52679 52948
YP_009013259.1 NC_023699_p57 hypothetical protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 39721 40086
YP_009013219.1 NC_023699_p17 hypothetical protein phrog_732 minor tail protein tail 1 16703 17551
YP_009013208.1 NC_023699_p6 capsid phrog_267 major head protein head and packaging 1 5062 5883
YP_009013279.1 NC_023699_p77 hypothetical protein phrog_67 DNA methyltransferase other 1 47569 48366
YP_009013217.1 NC_023699_p15 hypothetical protein phrog_106 minor tail protein tail 1 13178 14887
YP_009013253.1 NC_023699_p51 hypothetical protein phrog_3416 unknown function unknown function 1 36961 37761
YP_009013254.1 NC_023699_p52 hypothetical protein phrog_1849 unknown function unknown function 1 37842 38123
YP_009013275.1 NC_023699_p73 hypothetical protein phrog_2080 unknown function unknown function 1 46463 46726
YP_009013300.1 NC_023699_p98 hypothetical protein phrog_3813 unknown function unknown function 1 54742 54999
YP_009013233.1 NC_023699_p31 hypothetical protein singleton unknown function unknown function 1 27919 28167
YP_009013265.1 NC_023699_p63 hypothetical protein phrog_6573 unknown function unknown function 1 41662 41766
YP_009013256.1 NC_023699_p54 WhiB phrog_1333 unknown function unknown function 1 38464 38961
YP_009013246.1 NC_023699_p44 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 34228 34827
YP_009013236.1 NC_023699_p34 hypothetical protein phrog_404 minor tail protein tail 1 29511 29885
YP_009013247.1 NC_023699_p45 DNA-binding protein phrog_2104 unknown function unknown function 1 34904 35197
YP_009013239.1 NC_023699_p37 hypothetical protein phrog_8186 unknown function unknown function 1 30948 31052
YP_009013277.1 NC_023699_p75 hypothetical protein phrog_1943 unknown function unknown function 1 46923 47117
YP_009013227.1 NC_023699_p25 hypothetical protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25401 25598
YP_009013262.1 NC_023699_p60 hypothetical protein phrog_2632 unknown function unknown function 1 40468 40728
YP_009013298.1 NC_023699_p96 hypothetical protein phrog_1869 unknown function unknown function 1 54417 54581
YP_009013205.1 NC_023699_p3 portal phrog_104 portal protein head and packaging 1 2255 3625
YP_009013203.1 NC_023699_p1 small terminase phrog_226 minor tail protein tail 1 109 564
YP_009013244.1 NC_023699_p42 hypothetical protein phrog_2268 antitoxin from a toxin-antitoxin system moron, auxiliary metabolic gene and host takeover 1 33201 33449
YP_009013274.1 NC_023699_p72 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 45615 46466
YP_009013238.1 NC_023699_p36 DnaQ-like phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 30130 30951
YP_009013248.1 NC_023699_p46 hypothetical protein phrog_2025 unknown function unknown function 1 35255 35542
YP_009013230.1 NC_023699_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26181 26348
YP_009013252.1 NC_023699_p50 hypothetical protein phrog_1797 unknown function unknown function 1 36264 36926
YP_009013285.1 NC_023699_p83 hypothetical protein phrog_3447 unknown function unknown function 1 50085 50327
YP_009013294.1 NC_023699_p92 hypothetical protein phrog_2278 unknown function unknown function 1 52390 52686
YP_009013287.1 NC_023699_p85 hypothetical protein phrog_15080 unknown function unknown function 1 50695 50877
YP_009013305.1 NC_023699_p103 Ser/Thr kinase phrog_3297 kinase other 1 57246 57719
YP_009013307.1 NC_023699_p105 N-acetylglucosaminyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 57925 58548
YP_009013209.1 NC_023699_p7 hypothetical protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
YP_009013250.1 NC_023699_p48 hypothetical protein phrog_1816 unknown function unknown function 1 35891 36040
YP_009013266.1 NC_023699_p64 DNA-cytosine methyltransferase phrog_363 DNA methyltransferase other 1 41908 42666
YP_009013290.1 NC_023699_p88 hypothetical protein phrog_1901 unknown function unknown function 1 51448 51639
YP_009013214.1 NC_023699_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8576 9512
YP_009013249.1 NC_023699_p47 hypothetical protein phrog_1840 excisionase integration and excision 1 35631 35894
YP_009013212.1 NC_023699_p10 hypothetical protein phrog_813 head-tail adaptor connector 1 7097 7504
YP_009013218.1 NC_023699_p16 hypothetical protein phrog_110 minor tail protein tail 1 14957 16666
YP_009013271.1 NC_023699_p69 hypothetical protein phrog_780 unknown function unknown function 1 43478 43705
YP_009013303.1 NC_023699_p101 hypothetical protein phrog_2057 unknown function unknown function 1 55629 55790
YP_009013301.1 NC_023699_p99 hypothetical protein phrog_1186 unknown function unknown function 1 54996 55397
YP_009013231.1 NC_023699_p29 hypothetical protein phrog_747 unknown function unknown function 1 26379 26654
YP_009013224.1 NC_023699_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23513 23767
YP_009013207.1 NC_023699_p5 scaffold phrog_2592 head scaffolding protein head and packaging 1 4393 5043
YP_009013261.1 NC_023699_p59 hypothetical protein phrog_1834 unknown function unknown function 1 40241 40471
YP_009013269.1 NC_023699_p67 hypothetical protein phrog_3821 unknown function unknown function 1 42950 43300
YP_009013281.1 NC_023699_p79 hypothetical protein phrog_722 unknown function unknown function 1 48739 49107
YP_009013204.1 NC_023699_p2 large terminase phrog_9 terminase large subunit head and packaging 1 587 2224
YP_009013223.1 NC_023699_p21 hypothetical protein phrog_240 head protein head and packaging 1 23149 23490
YP_009013283.1 NC_023699_p81 hypothetical protein phrog_647 unknown function unknown function 1 49453 49737
YP_009013291.1 NC_023699_p89 hypothetical protein phrog_12283 unknown function unknown function 1 51636 51989
YP_009013304.1 NC_023699_p102 polypeptide N-acetylgalactos-aminyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55807 57243
YP_009013268.1 NC_023699_p66 hypothetical protein phrog_1311 unknown function unknown function 1 42817 42957
YP_009013267.1 NC_023699_p65 hypothetical protein phrog_2070 unknown function unknown function 1 42663 42824
YP_009013306.1 NC_023699_p104 hypothetical protein phrog_1693 unknown function unknown function 1 57722 57928
YP_009013297.1 NC_023699_p95 hypothetical protein phrog_8604 unknown function unknown function 1 53628 54230
YP_009013280.1 NC_023699_p78 hypothetical protein phrog_3962 unknown function unknown function 1 48359 48742
YP_009013292.1 NC_023699_p90 hypothetical protein phrog_1091 unknown function unknown function 1 51986 52195
YP_009013210.1 NC_023699_p8 hypothetical protein phrog_763 head-tail adaptor connector 1 6446 6778
YP_009013229.1 NC_023699_p27 hypothetical protein phrog_932 unknown function unknown function 1 26038 26184
YP_009013206.1 NC_023699_p4 protease phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_009013226.1 NC_023699_p24 hypothetical protein phrog_754 minor tail protein tail 1 24415 25395
YP_009013270.1 NC_023699_p68 hypothetical protein phrog_2001 unknown function unknown function 1 43359 43481
YP_009013257.1 NC_023699_p55 hypothetical protein phrog_2096 unknown function unknown function 1 38958 39443
YP_009013216.1 NC_023699_p14 tapemeasure phrog_1942 tail length tape measure protein tail 1 9530 13177