Genomic map of Mycobacterium virus Kugel (NC_023702)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023702
Definition
Mycobacterium phage Kugel, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
52379
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
63.83
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009013459.1 NC_023702_p4 hypothetical protein singleton unknown function unknown function 1 1199 1420
YP_009013513.1 NC_023702_p58 hypothetical protein phrog_397 unknown function unknown function -1 40473 40607
YP_009013471.1 NC_023702_p16 major capsid phrog_10 major head protein head and packaging 1 11675 12868
YP_009013505.1 NC_023702_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36059 36874
YP_009013458.1 NC_023702_p3 hypothetical protein phrog_22409 unknown function unknown function 1 1035 1199
YP_009013491.1 NC_023702_p36 hypothetical protein phrog_754 minor tail protein tail 1 28207 29163
YP_009013520.1 NC_023702_p65 hypothetical protein singleton unknown function unknown function -1 42243 42680
YP_009013525.1 NC_023702_p70 hypothetical protein phrog_520 unknown function unknown function -1 44145 44438
YP_009013473.1 NC_023702_p18 hypothetical protein phrog_2348 unknown function unknown function 1 13308 13436
YP_009013531.1 NC_023702_p76 hypothetical protein phrog_1809 unknown function unknown function -1 46266 46661
YP_009013507.1 NC_023702_p52 Intein domain phrog_221 metallo-phosphoesterase other -1 37012 38730
YP_009013460.1 NC_023702_p5 hypothetical protein phrog_226 minor tail protein tail 1 1434 1868
YP_009013527.1 NC_023702_p72 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 44759 44941
YP_009013497.1 NC_023702_p42 hypothetical protein phrog_2035 unknown function unknown function -1 32366 32536
YP_009013509.1 NC_023702_p54 hypothetical protein phrog_1167 phosphofructokinase other -1 38903 39457
YP_009013542.1 NC_023702_p87 DNA methylase phrog_363 DNA methyltransferase other -1 49459 50139
YP_009013502.1 NC_023702_p47 hypothetical protein phrog_1781 unknown function unknown function -1 35131 35361
YP_009013478.1 NC_023702_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15601 16499
YP_009013481.1 NC_023702_p26 minor tail phrog_106 minor tail protein tail 1 19015 21072
YP_009013501.1 NC_023702_p46 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33268 35094
YP_009013496.1 NC_023702_p41 hypothetical protein phrog_2387 nucleotide kinase other -1 31980 32369
YP_009013523.1 NC_023702_p68 hypothetical protein phrog_1705 unknown function unknown function -1 43808 43936
YP_009013534.1 NC_023702_p79 hypothetical protein phrog_1720 unknown function unknown function -1 47773 48042
YP_009013546.1 NC_023702_p91 hypothetical protein phrog_5542 unknown function unknown function -1 50856 51209
YP_009013519.1 NC_023702_p64 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 41954 42232
YP_009013522.1 NC_023702_p67 hypothetical protein phrog_2507 unknown function unknown function -1 43638 43811
YP_009013493.1 NC_023702_p38 serine integrase phrog_95 integrase integration and excision 1 29732 31234
YP_009013494.1 NC_023702_p39 hypothetical protein phrog_27933 unknown function unknown function -1 31308 31700
YP_009013547.1 NC_023702_p92 hypothetical protein phrog_2212 unknown function unknown function -1 51206 51304
YP_009013468.1 NC_023702_p13 portal phrog_104 portal protein head and packaging 1 8737 10203
YP_009013550.1 NC_023702_p95 hypothetical protein phrog_21178 unknown function unknown function -1 52058 52321
YP_009013530.1 NC_023702_p75 hypothetical protein phrog_1584 unknown function unknown function -1 45943 46269
YP_009013536.1 NC_023702_p81 hypothetical protein phrog_1155 unknown function unknown function -1 48239 48427
YP_009013472.1 NC_023702_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12889 13311
YP_009013500.1 NC_023702_p45 hypothetical protein phrog_383 unknown function unknown function -1 32891 33247
YP_009013541.1 NC_023702_p86 hypothetical protein phrog_16282 unknown function unknown function -1 49287 49355
YP_009013543.1 NC_023702_p88 hypothetical protein phrog_3414 unknown function unknown function -1 50206 50490
YP_009013515.1 NC_023702_p60 hypothetical protein phrog_1019 unknown function unknown function -1 41067 41153
YP_009013538.1 NC_023702_p83 hypothetical protein phrog_2093 unknown function unknown function -1 48591 48719
YP_009013503.1 NC_023702_p48 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35392 35883
YP_009013518.1 NC_023702_p63 hypothetical protein phrog_1546 unknown function unknown function -1 41598 41957
YP_009013512.1 NC_023702_p57 hypothetical protein phrog_1783 unknown function unknown function -1 40318 40476
YP_009013517.1 NC_023702_p62 hypothetical protein singleton unknown function unknown function -1 41358 41474
YP_009013475.1 NC_023702_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13813 14208
YP_009013537.1 NC_023702_p82 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48427 48594
YP_009013539.1 NC_023702_p84 hypothetical protein phrog_932 unknown function unknown function -1 48740 48889
YP_009013483.1 NC_023702_p28 minor tail phrog_110 minor tail protein tail 1 21273 23075
YP_009013516.1 NC_023702_p61 hypothetical protein singleton unknown function unknown function -1 41150 41251
YP_009013495.1 NC_023702_p40 hypothetical protein phrog_1966 unknown function unknown function -1 31717 31983
YP_009013476.1 NC_023702_p21 hypothetical protein phrog_123 tail terminator connector 1 14212 14658
YP_009013498.1 NC_023702_p43 hypothetical protein phrog_1860 unknown function unknown function -1 32533 32619
YP_009013466.1 NC_023702_p11 LysB phrog_102 endolysin lysis 1 6058 7026
YP_009013492.1 NC_023702_p37 hypothetical protein phrog_411 unknown function unknown function 1 29284 29580
YP_009013533.1 NC_023702_p78 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47477 47776
YP_009013486.1 NC_023702_p31 hypothetical protein phrog_1397 unknown function unknown function 1 23900 24247
YP_009013464.1 NC_023702_p9 hypothetical protein phrog_747 unknown function unknown function 1 4399 4656
YP_009013526.1 NC_023702_p71 hypothetical protein phrog_2184 unknown function unknown function -1 44435 44755
YP_009013482.1 NC_023702_p27 hypothetical protein phrog_1543 minor tail protein tail 1 21091 21273
YP_009013456.1 NC_023702_p1 HNH domain phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 596 904
YP_009013528.1 NC_023702_p73 hypothetical protein phrog_5961 unknown function unknown function -1 44938 45096
YP_009013465.1 NC_023702_p10 LysA phrog_317 endolysin lysis 1 4656 6068
YP_009013499.1 NC_023702_p44 hypothetical protein phrog_1971 unknown function unknown function -1 32625 32894
YP_009013477.1 NC_023702_p22 hypothetical protein phrog_117 major tail protein tail 1 14667 15518
YP_009013540.1 NC_023702_p85 hypothetical protein phrog_5798 unknown function unknown function -1 48886 49158
YP_009013535.1 NC_023702_p80 hypothetical protein phrog_1387 unknown function unknown function -1 48039 48242
YP_009013462.1 NC_023702_p7 hypothetical protein phrog_553 minor tail protein tail 1 3406 4116
YP_009013548.1 NC_023702_p93 hypothetical protein phrog_5419 unknown function unknown function -1 51382 51783
YP_009013524.1 NC_023702_p69 hypothetical protein singleton unknown function unknown function -1 43933 44142
YP_009013521.1 NC_023702_p66 DnaB phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42817 43638
YP_009013489.1 NC_023702_p34 hypothetical protein phrog_644 unknown function unknown function 1 27689 28009
YP_009013504.1 NC_023702_p49 hypothetical protein phrog_499 unknown function unknown function -1 35880 36062
YP_009013467.1 NC_023702_p12 terminase phrog_9 terminase large subunit head and packaging 1 7046 8737
YP_009013544.1 NC_023702_p89 hypothetical protein singleton unknown function unknown function -1 50528 50617
YP_009013510.1 NC_023702_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39454 40035
YP_009013490.1 NC_023702_p35 hypothetical protein phrog_1560 unknown function unknown function 1 28019 28210
YP_009013484.1 NC_023702_p29 hypothetical protein phrog_352 minor tail protein tail 1 23113 23559
YP_009013532.1 NC_023702_p77 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46703 47215
YP_009013480.1 NC_023702_p25 tapemeasure phrog_305 tail length tape measure protein tail 1 16511 18991
YP_009013506.1 NC_023702_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 36867 37007
YP_009013469.1 NC_023702_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10200 11084
YP_009013545.1 NC_023702_p90 hypothetical protein phrog_1387 unknown function unknown function -1 50671 50859
YP_009013463.1 NC_023702_p8 hypothetical protein phrog_1718 tail protein tail 1 4130 4390
YP_009013470.1 NC_023702_p15 scaffolding phrog_233 head scaffolding protein head and packaging 1 11145 11642
YP_009013457.1 NC_023702_p2 hypothetical protein phrog_4152 unknown function unknown function 1 901 1017
YP_009013529.1 NC_023702_p74 AddB domain phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 45126 45950
YP_009013488.1 NC_023702_p33 hypothetical protein phrog_382 minor tail protein with lysin activity tail 1 26118 27596
YP_009013514.1 NC_023702_p59 endoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 40604 41080
YP_009013549.1 NC_023702_p94 hypothetical protein phrog_828 unknown function unknown function -1 51792 51995
YP_009013511.1 NC_023702_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39824 40339
YP_009013508.1 NC_023702_p53 hypothetical protein phrog_1503 unknown function unknown function -1 38727 38906
YP_009013461.1 NC_023702_p6 tail phrog_1197 tail protein tail 1 2326 3396
YP_009013485.1 NC_023702_p30 hypothetical protein phrog_981 minor tail protein tail 1 23556 23903
YP_009013487.1 NC_023702_p32 hypothetical protein phrog_346 minor tail protein tail 1 24272 26125
YP_009013479.1 NC_023702_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15601 16077
YP_009013474.1 NC_023702_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 13433 13813