Genomic map of Mycobacterium phage Dori (NC_023703)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023703
Definition
Mycobacterium phage Dori, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
64613
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
65.98
Number of singletons
18
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009013554.1 NC_023703_p4 hypothetical protein singleton unknown function unknown function 1 2393 2584
YP_009013572.1 NC_023703_p22 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 16225 16629
YP_009013588.1 NC_023703_p38 hypothetical protein singleton unknown function unknown function 1 35255 35452
YP_009013556.1 NC_023703_p6 hypothetical protein phrog_781 unknown function unknown function 1 3274 3681
YP_009013605.1 NC_023703_p55 hypothetical protein phrog_5015 unknown function unknown function 1 46509 47012
YP_009013587.1 NC_023703_p37 hypothetical protein phrog_2804 virion structural protein head and packaging 1 34528 35232
YP_009013608.1 NC_023703_p58 hypothetical protein phrog_1810 unknown function unknown function 1 47703 48095
YP_009013619.1 NC_023703_p69 HNH domain phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 53193 53732
YP_009013622.1 NC_023703_p72 DNA methyltransferase phrog_116 DNA methyltransferase other 1 54225 55727
YP_009013644.1 NC_023703_p94 hypothetical protein phrog_26576 unknown function unknown function -1 64210 64530
YP_009013552.1 NC_023703_p2 endoVII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism 1 249 815
YP_009013591.1 NC_023703_p41 LysB phrog_102 endolysin lysis 1 36640 37869
YP_009013621.1 NC_023703_p71 hypothetical protein singleton unknown function unknown function 1 54043 54225
YP_009013593.1 NC_023703_p43 hypothetical protein singleton unknown function unknown function -1 39692 40051
YP_009013585.1 NC_023703_p35 hypothetical protein phrog_941 unknown function unknown function 1 33401 34099
YP_009013575.1 NC_023703_p25 hypothetical protein phrog_838 unknown function unknown function 1 23120 24547
YP_009013601.1 NC_023703_p51 phage antirepressor phrog_130 anti-repressor Ant transcription regulation 1 44920 45693
YP_009013566.1 NC_023703_p16 hypothetical protein phrog_2525 unknown function unknown function 1 12908 13240
YP_009013617.1 NC_023703_p67 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 52520 52948
YP_009013582.1 NC_023703_p32 hypothetical protein phrog_282 unknown function unknown function 1 30878 31522
YP_009013623.1 NC_023703_p73 hypothetical protein singleton unknown function unknown function 1 55724 55849
YP_009013638.1 NC_023703_p88 hypothetical protein singleton unknown function unknown function -1 61268 62683
YP_009013594.1 NC_023703_p44 hypothetical protein phrog_19663 unknown function unknown function -1 40243 40530
YP_009013581.1 NC_023703_p31 hypothetical protein phrog_948 unknown function unknown function 1 30423 30851
YP_009013612.1 NC_023703_p62 hypothetical protein phrog_11506 unknown function unknown function 1 48770 49126
YP_009013614.1 NC_023703_p64 RecT phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 50133 51218
YP_009013604.1 NC_023703_p54 hypothetical protein phrog_3507 unknown function unknown function 1 46186 46512
YP_009013578.1 NC_023703_p28 hypothetical protein phrog_2235 minor tail protein tail 1 28425 28751
YP_009013568.1 NC_023703_p18 hypothetical protein phrog_5711 head fiber protein head and packaging 1 14192 14587
YP_009013590.1 NC_023703_p40 hypothetical protein phrog_7499 unknown function unknown function 1 36425 36640
YP_009013636.1 NC_023703_p86 PinR phrog_125 DNA invertase DNA, RNA and nucleotide metabolism 1 60080 60688
YP_009013607.1 NC_023703_p57 hypothetical protein phrog_549 unknown function unknown function 1 47308 47706
YP_009013574.1 NC_023703_p24 tapemeasure phrog_934 tail length tape measure protein tail 1 17415 23120
YP_009013629.1 NC_023703_p79 hypothetical protein phrog_2451 unknown function unknown function 1 57323 57493
YP_009013641.1 NC_023703_p91 hypothetical protein singleton unknown function unknown function 1 63259 63528
YP_009013589.1 NC_023703_p39 LysA phrog_6707 endolysin lysis 1 35493 36428
YP_009013569.1 NC_023703_p19 hypothetical protein phrog_783 head-tail adaptor connector 1 14673 15431
YP_009013616.1 NC_023703_p66 hypothetical protein phrog_210 unknown function unknown function 1 51686 52519
YP_009013592.1 NC_023703_p42 DNA methylase N-4/N-6 phrog_67 DNA methyltransferase other 1 37990 39627
YP_009013609.1 NC_023703_p59 hypothetical protein phrog_11875 unknown function unknown function 1 48092 48304
YP_009013599.1 NC_023703_p49 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 44285 44563
YP_009013643.1 NC_023703_p93 hypothetical protein phrog_22338 unknown function unknown function -1 63872 64171
YP_009013598.1 NC_023703_p48 hypothetical protein phrog_6288 unknown function unknown function -1 43438 44088
YP_009013625.1 NC_023703_p75 hypothetical protein phrog_1311 unknown function unknown function 1 56198 56362
YP_009013597.1 NC_023703_p47 hypothetical protein phrog_3732 unknown function unknown function -1 42728 43441
YP_009013558.1 NC_023703_p8 portal phrog_859 portal protein head and packaging 1 5655 8153
YP_009013634.1 NC_023703_p84 similar to M. avium flagellar hook length control protein phrog_27872 unknown function unknown function 1 59298 59654
YP_009013642.1 NC_023703_p92 hypothetical protein singleton unknown function unknown function 1 63628 63804
YP_009013570.1 NC_023703_p20 hypothetical protein phrog_810 unknown function unknown function 1 15428 15976
YP_009013562.1 NC_023703_p12 hypothetical protein phrog_14250 unknown function unknown function 1 11226 11591
YP_009013600.1 NC_023703_p50 hypothetical protein singleton unknown function unknown function -1 44696 44821
YP_009013606.1 NC_023703_p56 hypothetical protein singleton unknown function unknown function 1 47063 47311
YP_009013640.1 NC_023703_p90 TnpR resolvase domain singleton unknown function unknown function 1 63018 63221
YP_009013637.1 NC_023703_p87 hypothetical protein singleton unknown function unknown function 1 60759 61271
YP_009013635.1 NC_023703_p85 hypothetical protein singleton unknown function unknown function 1 59834 59992
YP_009013567.1 NC_023703_p17 hypothetical protein phrog_792 major tail protein tail 1 13328 14131
YP_009013633.1 NC_023703_p83 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 58816 59301
YP_009013615.1 NC_023703_p65 hypothetical protein phrog_204 unknown function unknown function 1 51304 51642
YP_009013631.1 NC_023703_p81 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 57732 58109
YP_009013560.1 NC_023703_p10 hypothetical protein phrog_777 major head protein head and packaging 1 8393 10276
YP_009013580.1 NC_023703_p30 hypothetical protein phrog_240 head protein head and packaging 1 30025 30414
YP_009013576.1 NC_023703_p26 hypothetical protein phrog_837 minor tail protein tail 1 24544 25590
YP_009013627.1 NC_023703_p77 hypothetical protein phrog_18450 unknown function unknown function 1 56600 56884
YP_009013583.1 NC_023703_p33 hypothetical protein phrog_282 unknown function unknown function 1 31519 32118
YP_009013628.1 NC_023703_p78 hypothetical protein phrog_9720 unknown function unknown function 1 56952 57326
YP_009013626.1 NC_023703_p76 hypothetical protein phrog_1495 unknown function unknown function 1 56362 56595
YP_009013639.1 NC_023703_p89 hypothetical protein singleton unknown function unknown function -1 62680 62958
YP_009013613.1 NC_023703_p63 YqaJ recombinse domain phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 49123 50127
YP_009013596.1 NC_023703_p46 hypothetical protein phrog_87 metallo-protease other -1 42059 42481
YP_009013595.1 NC_023703_p45 tyrosine integrase phrog_1 integrase integration and excision -1 40820 42022
YP_009013579.1 NC_023703_p29 hypothetical protein phrog_416 minor tail protein tail 1 28828 29994
YP_009013577.1 NC_023703_p27 hypothetical protein phrog_3493 minor tail protein tail 1 25587 28415
YP_009013563.1 NC_023703_p13 hypothetical protein phrog_565 holin lysis 1 11588 11983
YP_009013551.1 NC_023703_p1 hypothetical protein singleton unknown function unknown function 1 1 252
YP_009013630.1 NC_023703_p80 DNA binding domain singleton unknown function unknown function 1 57490 57729
YP_009013557.1 NC_023703_p7 hypothetical protein phrog_776 portal protein head and packaging 1 3691 5658
YP_009013603.1 NC_023703_p53 RDF phrog_66 excisionase and transcriptional regulator integration and excision 1 45995 46186
YP_009013611.1 NC_023703_p61 hypothetical protein phrog_5806 unknown function unknown function 1 48639 48773
YP_009013555.1 NC_023703_p5 hypothetical protein phrog_928 unknown function unknown function 1 2681 3202
YP_009013620.1 NC_023703_p70 hypothetical protein singleton unknown function unknown function 1 53729 54043
YP_009013571.1 NC_023703_p21 hypothetical protein singleton unknown function unknown function 1 15990 16238
YP_009013586.1 NC_023703_p36 hypothetical protein phrog_892 tail fiber protein tail 1 34118 34531
YP_009013561.1 NC_023703_p11 hypothetical protein phrog_779 unknown function unknown function 1 10375 11223
YP_009013624.1 NC_023703_p74 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55849 56205
YP_009013553.1 NC_023703_p3 terminase phrog_38 terminase large subunit head and packaging 1 815 2365
YP_009013618.1 NC_023703_p68 hypothetical protein phrog_6109 unknown function unknown function 1 52948 53190
YP_009013602.1 NC_023703_p52 hypothetical protein phrog_35761 unknown function unknown function 1 45696 45998
YP_009013559.1 NC_023703_p9 hypothetical protein phrog_2069 unknown function unknown function 1 8150 8341
YP_009013565.1 NC_023703_p15 hypothetical protein phrog_2344 unknown function unknown function 1 12459 12911
YP_009013573.1 NC_023703_p23 hypothetical protein phrog_1118 tail assembly chaperone tail 1 16796 17389
YP_009013632.1 NC_023703_p82 hypothetical protein phrog_26247 unknown function unknown function 1 58386 58685
YP_009013564.1 NC_023703_p14 hypothetical protein phrog_2272 unknown function unknown function 1 11980 12462
YP_009013584.1 NC_023703_p34 hypothetical protein phrog_3329 unknown function unknown function 1 32115 33401
YP_009013610.1 NC_023703_p60 WhiB phrog_12112 transcriptional regulator WhiB-like transcription regulation 1 48301 48642