Genomic map of Rhodococcus phage ReqiDocB7 (NC_023706)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023706
Definition
Rhodococcus phage ReqiDocB7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
75772
Host Name
Rhodococcus equi
Host domain
Bacteria
Is prophage?
undef
Number of proteins
105
%GC
56.65
Number of singletons
51
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009013811.1 NC_023706_p21 pre-TMP frameshift protein phrog_3096 tail assembly chaperone tail 1 16982 17548
YP_009013893.1 NC_023706_p103 hypothetical protein singleton unknown function unknown function -1 73717 74754
YP_009013841.1 NC_023706_p51 hypothetical protein phrog_14234 unknown function unknown function -1 44562 45152
YP_009013853.1 NC_023706_p63 hypothetical protein singleton unknown function unknown function -1 49933 50664
YP_009013879.1 NC_023706_p89 hypothetical protein singleton unknown function unknown function -1 63850 64197
YP_009013807.1 NC_023706_p17 hypothetical protein phrog_5299 unknown function unknown function 1 15011 15520
YP_009013804.1 NC_023706_p14 hypothetical protein singleton unknown function unknown function 1 13717 14001
YP_009013891.1 NC_023706_p101 hypothetical protein singleton unknown function unknown function -1 71511 71795
YP_009013792.1 NC_023706_p2 hypothetical protein singleton unknown function unknown function 1 1093 1548
YP_009013874.1 NC_023706_p84 hypothetical protein singleton unknown function unknown function -1 62641 62979
YP_009013797.1 NC_023706_p7 hypothetical protein phrog_9707 tail protein tail 1 7688 9100
YP_009013806.1 NC_023706_p16 hypothetical protein phrog_26 tail completion or Neck1 protein connector 1 14520 15011
YP_009013857.1 NC_023706_p67 hypothetical protein phrog_6646 unknown function unknown function -1 52001 52522
YP_009013808.1 NC_023706_p18 hypothetical protein singleton unknown function unknown function 1 15532 15873
YP_009013809.1 NC_023706_p19 hypothetical protein phrog_290 minor tail protein tail 1 15877 16893
YP_009013801.1 NC_023706_p11 hypothetical protein phrog_5455 head decoration head and packaging 1 11765 12238
YP_009013803.1 NC_023706_p13 hypothetical protein singleton unknown function unknown function 1 13489 13656
YP_009013863.1 NC_023706_p73 hypothetical protein singleton unknown function unknown function -1 57320 57550
YP_009013830.1 NC_023706_p40 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 38681 39094
YP_009013816.1 NC_023706_p26 holin phrog_981 minor tail protein tail 1 32365 32625
YP_009013794.1 NC_023706_p4 Mu gp29-like protein phrog_113 portal protein head and packaging 1 3689 5428
YP_009013845.1 NC_023706_p55 hypothetical protein phrog_6622 unknown function unknown function -1 46723 47385
YP_009013836.1 NC_023706_p46 hypothetical protein singleton unknown function unknown function -1 41917 42069
YP_009013818.1 NC_023706_p28 holin phrog_4565 unknown function unknown function 1 33620 33901
YP_009013876.1 NC_023706_p86 hypothetical protein singleton unknown function unknown function -1 63130 63351
YP_009013826.1 NC_023706_p36 DNA methylase phrog_67 DNA methyltransferase other -1 36810 37520
YP_009013849.1 NC_023706_p59 tyrosine recombinase/integrase phrog_216 integrase integration and excision -1 48460 48939
YP_009013882.1 NC_023706_p92 hypothetical protein singleton unknown function unknown function -1 65070 65444
YP_009013848.1 NC_023706_p58 hypothetical protein phrog_4480 unknown function unknown function -1 48164 48463
YP_009013820.1 NC_023706_p30 holin phrog_3798 unknown function unknown function 1 34120 34521
YP_009013837.1 NC_023706_p47 hypothetical protein singleton unknown function unknown function -1 42059 42184
YP_009013869.1 NC_023706_p79 hypothetical protein phrog_6032 unknown function unknown function -1 59464 60180
YP_009013825.1 NC_023706_p35 hypothetical protein singleton unknown function unknown function -1 36446 36748
YP_009013814.1 NC_023706_p24 hypothetical protein phrog_1887 tail protein tail 1 29752 31497
YP_009013894.1 NC_023706_p104 hypothetical protein singleton unknown function unknown function -1 74751 74888
YP_009013855.1 NC_023706_p65 hypothetical protein singleton unknown function unknown function -1 51521 51691
YP_009013823.1 NC_023706_p33 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 35001 36212
YP_009013838.1 NC_023706_p48 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 42174 43676
YP_009013850.1 NC_023706_p60 hypothetical protein singleton unknown function unknown function -1 48947 49567
YP_009013843.1 NC_023706_p53 hypothetical protein phrog_6746 unknown function unknown function -1 45944 46264
YP_009013844.1 NC_023706_p54 HNH endonuclease phrog_5718 HNH endonuclease DNA, RNA and nucleotide metabolism -1 46383 46721
YP_009013832.1 NC_023706_p42 hypothetical protein phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 39279 39836
YP_009013864.1 NC_023706_p74 hypothetical protein singleton unknown function unknown function -1 57495 58118
YP_009013815.1 NC_023706_p25 hypothetical protein singleton unknown function unknown function 1 31494 32288
YP_009013800.1 NC_023706_p10 hypothetical protein phrog_976 head maturation protease head and packaging 1 10515 11750
YP_009013834.1 NC_023706_p44 DnaN phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 40185 41300
YP_009013887.1 NC_023706_p97 hypothetical protein singleton unknown function unknown function -1 67484 67924
YP_009013833.1 NC_023706_p43 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism -1 39829 40188
YP_009013865.1 NC_023706_p75 hypothetical protein phrog_16275 unknown function unknown function -1 58136 58426
YP_009013859.1 NC_023706_p69 AAA protein phrog_5424 ATPase other -1 54553 56160
YP_009013805.1 NC_023706_p15 hypothetical protein phrog_195 head-tail adaptor connector 1 14011 14520
YP_009013846.1 NC_023706_p56 hypothetical protein phrog_12293 unknown function unknown function -1 47404 47871
YP_009013835.1 NC_023706_p45 oligoribonuclease phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 41297 41920
YP_009013851.1 NC_023706_p61 hypothetical protein phrog_6495 unknown function unknown function -1 49570 49782
YP_009013822.1 NC_023706_p32 hypothetical protein singleton unknown function unknown function -1 34811 34996
YP_009013824.1 NC_023706_p34 WhiB phrog_472 WhiB transcriptional factor transcription regulation -1 36228 36428
YP_009013802.1 NC_023706_p12 hypothetical protein phrog_29 major head protein head and packaging 1 12251 13480
YP_009013868.1 NC_023706_p78 hypothetical protein singleton unknown function unknown function -1 59000 59467
YP_009013886.1 NC_023706_p96 hypothetical protein singleton unknown function unknown function -1 67052 67390
YP_009013796.1 NC_023706_p6 hypothetical protein phrog_37491 unknown function unknown function 1 6795 7679
YP_009013892.1 NC_023706_p102 hypothetical protein phrog_5311 helicase DNA, RNA and nucleotide metabolism -1 71792 73654
YP_009013831.1 NC_023706_p41 hypothetical protein singleton unknown function unknown function -1 39091 39282
YP_009013799.1 NC_023706_p9 hypothetical protein phrog_6679 unknown function unknown function 1 10204 10473
YP_009013880.1 NC_023706_p90 hypothetical protein singleton unknown function unknown function -1 64199 64519
YP_009013852.1 NC_023706_p62 hypothetical protein singleton unknown function unknown function -1 49779 49919
YP_009013881.1 NC_023706_p91 hypothetical protein phrog_16548 unknown function unknown function -1 64615 64971
YP_009013810.1 NC_023706_p20 truncated pre-TMP frameshift protein phrog_3096 tail assembly chaperone tail 1 16982 17820
YP_009013827.1 NC_023706_p37 hypothetical protein phrog_10015 unknown function unknown function -1 37524 37679
YP_009013821.1 NC_023706_p31 hypothetical protein singleton unknown function unknown function -1 34567 34809
YP_009013798.1 NC_023706_p8 hypothetical protein singleton unknown function unknown function 1 9101 10207
YP_009013885.1 NC_023706_p95 hypothetical protein singleton unknown function unknown function -1 66637 66948
YP_009013888.1 NC_023706_p98 hypothetical protein singleton unknown function unknown function -1 68013 68369
YP_009013828.1 NC_023706_p38 LysB phrog_102 endolysin lysis -1 37679 38440
YP_009013829.1 NC_023706_p39 hypothetical protein singleton unknown function unknown function -1 38457 38684
YP_009013889.1 NC_023706_p99 hypothetical protein singleton unknown function unknown function -1 70853 71209
YP_009013866.1 NC_023706_p76 hypothetical protein singleton unknown function unknown function -1 58428 58718
YP_009013884.1 NC_023706_p94 hypothetical protein singleton unknown function unknown function -1 66130 66543
YP_009013873.1 NC_023706_p83 hypothetical protein singleton unknown function unknown function -1 62399 62641
YP_009013847.1 NC_023706_p57 hypothetical protein singleton unknown function unknown function -1 47868 48164
YP_009013870.1 NC_023706_p80 hypothetical protein singleton unknown function unknown function -1 60331 60681
YP_009013793.1 NC_023706_p3 TerL phrog_2 terminase large subunit head and packaging 1 1607 3589
YP_009013795.1 NC_023706_p5 hypothetical protein phrog_892 tail fiber protein tail 1 5428 6795
YP_009013890.1 NC_023706_p100 hypothetical protein singleton unknown function unknown function -1 71206 71514
YP_009013812.1 NC_023706_p22 tape measure protein phrog_5448 tail length tape measure protein tail 1 17901 27206
YP_009013883.1 NC_023706_p93 hypothetical protein singleton unknown function unknown function -1 65547 66032
YP_009013862.1 NC_023706_p72 hypothetical protein singleton unknown function unknown function -1 57151 57318
YP_009013839.1 NC_023706_p49 hypothetical protein singleton unknown function unknown function -1 43663 43920
YP_009013791.1 NC_023706_p1 hypothetical protein singleton unknown function unknown function 1 152 1039
YP_009013871.1 NC_023706_p81 hypothetical protein phrog_6708 unknown function unknown function -1 61123 62073
YP_009013854.1 NC_023706_p64 hypothetical protein phrog_5406 unknown function unknown function -1 50766 51524
YP_009013861.1 NC_023706_p71 hypothetical protein singleton unknown function unknown function -1 56615 57154
YP_009013878.1 NC_023706_p88 hypothetical protein singleton unknown function unknown function -1 63612 63839
YP_009013858.1 NC_023706_p68 vWFA phrog_5298 cobalamin biosynthesis protein moron, auxiliary metabolic gene and host takeover -1 52606 54540
YP_009013813.1 NC_023706_p23 hypothetical protein phrog_5287 minor tail protein tail 1 27206 29752
YP_009013856.1 NC_023706_p66 hypothetical protein singleton unknown function unknown function -1 51678 51935
YP_009013819.1 NC_023706_p29 hypothetical protein phrog_17624 membrane protein moron, auxiliary metabolic gene and host takeover 1 33759 34133
YP_009013875.1 NC_023706_p85 hypothetical protein singleton unknown function unknown function -1 62979 63128
YP_009013895.1 NC_023706_p105 hypothetical protein phrog_5362 DNA primase DNA, RNA and nucleotide metabolism -1 74890 75753
YP_009013842.1 NC_023706_p52 hypothetical protein phrog_5686 unknown function unknown function -1 45195 45857
YP_009013840.1 NC_023706_p50 hypothetical protein phrog_7649 unknown function unknown function -1 43893 44471
YP_009013867.1 NC_023706_p77 hypothetical protein singleton unknown function unknown function -1 58843 58998
YP_009013817.1 NC_023706_p27 LysA phrog_12609 endolysin lysis 1 32628 33617
YP_009013872.1 NC_023706_p82 hypothetical protein singleton unknown function unknown function -1 62223 62405
YP_009013877.1 NC_023706_p87 hypothetical protein singleton unknown function unknown function -1 63360 63512
YP_009013860.1 NC_023706_p70 hypothetical protein singleton unknown function unknown function -1 56269 56763