| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023720 |
Definition |
Mycobacterium phage Perseus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus. |
DB of origin |
REFSEQ |
Length |
53142 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
92 |
%GC |
63.71 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009016040.1 | NC_023720_p54 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 39317 | 39643 |
| YP_009015990.1 | NC_023720_p4 | hypothetical protein | phrog_26323 | unknown function | unknown function | 1 | 1899 | 2072 |
| YP_009016033.1 | NC_023720_p47 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35450 | 35929 |
| YP_009016036.1 | NC_023720_p50 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36883 | 37023 |
| YP_009015999.1 | NC_023720_p13 | portal | phrog_104 | portal protein | head and packaging | 1 | 8816 | 10258 |
| YP_009016039.1 | NC_023720_p53 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38919 | 39320 |
| YP_009016066.1 | NC_023720_p80 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49295 | 49483 |
| YP_009016002.1 | NC_023720_p16 | major capsid | phrog_10 | major head protein | head and packaging | 1 | 11716 | 12714 |
| YP_009016071.1 | NC_023720_p85 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 50243 | 50464 |
| YP_009016059.1 | NC_023720_p73 | hypothetical protein | phrog_3851 | unknown function | unknown function | -1 | 46839 | 47153 |
| YP_009016053.1 | NC_023720_p67 | hypothetical protein | phrog_13492 | unknown function | unknown function | -1 | 45117 | 45368 |
| YP_009016074.1 | NC_023720_p88 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 51295 | 51414 |
| YP_009016024.1 | NC_023720_p38 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 30012 | 30296 |
| YP_009016048.1 | NC_023720_p62 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 42872 | 43681 |
| YP_009016006.1 | NC_023720_p20 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 13847 | 14242 |
| YP_009016045.1 | NC_023720_p59 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 40819 | 42045 |
| YP_009016005.1 | NC_023720_p19 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13485 | 13847 |
| YP_009016020.1 | NC_023720_p34 | carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26843 | 28321 |
| YP_009016029.1 | NC_023720_p43 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32657 | 32944 |
| YP_009016011.1 | NC_023720_p25 | tapemeasure | phrog_305 | tail length tape measure protein | tail | 1 | 16486 | 18966 |
| YP_009016026.1 | NC_023720_p40 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 32072 | 32401 |
| YP_009015991.1 | NC_023720_p5 | hypothetical protein | phrog_4371 | unknown function | unknown function | 1 | 2124 | 2384 |
| YP_009016009.1 | NC_023720_p23 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15675 | 16474 |
| YP_009015987.1 | NC_023720_p1 | HNH endonuclease domain | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 595 | 891 |
| YP_009016032.1 | NC_023720_p46 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35189 | 35419 |
| YP_009016072.1 | NC_023720_p86 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 50733 | 51080 |
| YP_009015988.1 | NC_023720_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 926 | 1360 |
| YP_009016044.1 | NC_023720_p58 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40659 | 40793 |
| YP_009016052.1 | NC_023720_p66 | RecB-like | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44317 | 45117 |
| YP_009016021.1 | NC_023720_p35 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28414 | 28734 |
| YP_009015997.1 | NC_023720_p11 | LysB | phrog_102 | endolysin | lysis | 1 | 6143 | 7111 |
| YP_009016055.1 | NC_023720_p69 | hypothetical protein | phrog_12774 | unknown function | unknown function | -1 | 45544 | 45816 |
| YP_009016077.1 | NC_023720_p91 | hypothetical protein | phrog_37678 | unknown function | unknown function | -1 | 51917 | 52207 |
| YP_009016013.1 | NC_023720_p27 | hypothetical protein | phrog_1543 | minor tail protein | tail | 1 | 21541 | 21723 |
| YP_009016078.1 | NC_023720_p92 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 52288 | 52476 |
| YP_009016030.1 | NC_023720_p44 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32941 | 33297 |
| YP_009016061.1 | NC_023720_p75 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 47587 | 48099 |
| YP_009016047.1 | NC_023720_p61 | NrdH-like | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42606 | 42872 |
| YP_009015994.1 | NC_023720_p8 | hypothetical protein | phrog_1718 | tail protein | tail | 1 | 4195 | 4455 |
| YP_009016015.1 | NC_023720_p29 | hypothetical protein | phrog_23972 | unknown function | unknown function | 1 | 23561 | 23725 |
| YP_009016058.1 | NC_023720_p72 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46525 | 46842 |
| YP_009015992.1 | NC_023720_p6 | hypothetical protein | phrog_1197 | tail protein | tail | 1 | 2400 | 3470 |
| YP_009016069.1 | NC_023720_p83 | hypothetical protein | phrog_8345 | unknown function | unknown function | -1 | 49871 | 50077 |
| YP_009016025.1 | NC_023720_p39 | integrase (S-int) | phrog_95 | integrase | integration and excision | 1 | 30449 | 31951 |
| YP_009016057.1 | NC_023720_p71 | hypothetical protein | phrog_14169 | zinc-finger domain protein | other | -1 | 46301 | 46528 |
| YP_009016054.1 | NC_023720_p68 | hypothetical protein | phrog_12594 | unknown function | unknown function | -1 | 45365 | 45532 |
| YP_009016027.1 | NC_023720_p41 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 32398 | 32568 |
| YP_009016008.1 | NC_023720_p22 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14701 | 15552 |
| YP_009016037.1 | NC_023720_p51 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37028 | 38746 |
| YP_009016067.1 | NC_023720_p81 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 49483 | 49650 |
| YP_009016007.1 | NC_023720_p21 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14246 | 14692 |
| YP_009016028.1 | NC_023720_p42 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 32565 | 32660 |
| YP_009016068.1 | NC_023720_p82 | hypothetical protein | phrog_11336 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 49680 | 49874 |
| YP_009016042.1 | NC_023720_p56 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 40010 | 40525 |
| YP_009016038.1 | NC_023720_p52 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 38743 | 38922 |
| YP_009016065.1 | NC_023720_p79 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49095 | 49298 |
| YP_009016017.1 | NC_023720_p31 | hypothetical protein | phrog_981 | minor tail protein | tail | 1 | 24281 | 24628 |
| YP_009016016.1 | NC_023720_p30 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 23838 | 24284 |
| YP_009016001.1 | NC_023720_p15 | scaffolding | phrog_233 | head scaffolding protein | head and packaging | 1 | 11194 | 11706 |
| YP_009015995.1 | NC_023720_p9 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4463 | 4720 |
| YP_009016004.1 | NC_023720_p18 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13036 | 13485 |
| YP_009016012.1 | NC_023720_p26 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 19487 | 21544 |
| YP_009016046.1 | NC_023720_p60 | endo VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 42042 | 42536 |
| YP_009016073.1 | NC_023720_p87 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 51080 | 51265 |
| YP_009016049.1 | NC_023720_p63 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 43668 | 43814 |
| YP_009015989.1 | NC_023720_p3 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1532 | 1843 |
| YP_009016018.1 | NC_023720_p32 | hypothetical protein | phrog_1397 | unknown function | unknown function | 1 | 24652 | 24972 |
| YP_009016000.1 | NC_023720_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10255 | 11136 |
| YP_009016050.1 | NC_023720_p64 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 43811 | 44104 |
| YP_009016031.1 | NC_023720_p45 | DNA pol I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33323 | 35152 |
| YP_009016070.1 | NC_023720_p84 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 50097 | 50246 |
| YP_009016035.1 | NC_023720_p49 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36105 | 36890 |
| YP_009016014.1 | NC_023720_p28 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 21723 | 23525 |
| YP_009015996.1 | NC_023720_p10 | LysA | phrog_317 | endolysin | lysis | 1 | 4720 | 6153 |
| YP_009016063.1 | NC_023720_p77 | hypothetical protein | phrog_6474 | recombination directionality factor | integration and excision | -1 | 48653 | 48832 |
| YP_009016023.1 | NC_023720_p37 | hypothetical protein | phrog_754 | minor tail protein | tail | 1 | 28932 | 29891 |
| YP_009015993.1 | NC_023720_p7 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 3489 | 4181 |
| YP_009016010.1 | NC_023720_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15675 | 16052 |
| YP_009016075.1 | NC_023720_p89 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 51530 | 51685 |
| YP_009016051.1 | NC_023720_p65 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 44108 | 44290 |
| YP_009016043.1 | NC_023720_p57 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 40504 | 40662 |
| YP_009016076.1 | NC_023720_p90 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 51769 | 51975 |
| YP_009016041.1 | NC_023720_p55 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39640 | 40221 |
| YP_009016019.1 | NC_023720_p33 | minor tail subunit | phrog_346 | minor tail protein | tail | 1 | 24997 | 26850 |
| YP_009016003.1 | NC_023720_p17 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 12800 | 13036 |
| YP_009016022.1 | NC_023720_p36 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28744 | 28935 |
| YP_009016034.1 | NC_023720_p48 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35926 | 36108 |
| YP_009016064.1 | NC_023720_p78 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 48829 | 49098 |
| YP_009016056.1 | NC_023720_p70 | hypothetical protein | phrog_11473 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 45829 | 46311 |
| YP_009016062.1 | NC_023720_p76 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48361 | 48660 |
| YP_009015998.1 | NC_023720_p12 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7131 | 8819 |
| YP_009016060.1 | NC_023720_p74 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 47150 | 47545 |