functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_023723 |
Definition |
Mycobacterium phage Aeneas, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
REFSEQ |
Length |
53684 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
99 |
%GC |
63.58 |
Number of singletons |
1 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
YP_009016334.1 | NC_023723_p69 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 44278 | 44571 |
YP_009016308.1 | NC_023723_p43 | hypothetical protein | phrog_1860 | unknown function | unknown function | -1 | 31963 | 32058 |
YP_009016268.1 | NC_023723_p3 | hypothetical protein | phrog_2830 | unknown function | unknown function | 1 | 1532 | 1843 |
YP_009016345.1 | NC_023723_p80 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 48054 | 48566 |
YP_009016298.1 | NC_023723_p33 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 24455 | 26308 |
YP_009016348.1 | NC_023723_p83 | hypothetical protein | phrog_1720 | unknown function | unknown function | -1 | 49296 | 49565 |
YP_009016275.1 | NC_023723_p10 | LysA | phrog_317 | endolysin | lysis | 1 | 4720 | 6147 |
YP_009016341.1 | NC_023723_p76 | hypothetical protein | phrog_14169 | zinc-finger domain protein | other | -1 | 46768 | 46995 |
YP_009016302.1 | NC_023723_p37 | hypothetical protein | phrog_12500 | minor tail protein | tail | 1 | 28390 | 28968 |
YP_009016355.1 | NC_023723_p90 | hypothetical protein | phrog_14636 | unknown function | unknown function | -1 | 50714 | 50884 |
YP_009016359.1 | NC_023723_p94 | hypothetical protein | phrog_2985 | unknown function | unknown function | 1 | 51953 | 52108 |
YP_009016338.1 | NC_023723_p73 | hypothetical protein | phrog_12594 | unknown function | unknown function | -1 | 45832 | 45999 |
YP_009016323.1 | NC_023723_p58 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39829 | 40365 |
YP_009016297.1 | NC_023723_p32 | minor tail protein | phrog_1397 | unknown function | unknown function | 1 | 24083 | 24430 |
YP_009016279.1 | NC_023723_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9026 | 10468 |
YP_009016290.1 | NC_023723_p24 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15784 | 16260 |
YP_009016288.1 | NC_023723_p23 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 14911 | 15762 |
YP_009016289.2 | NC_023723_p25 | hypothetical protein | phrog_3656 | tail assembly chaperone | tail | 1 | 16311 | 16682 |
YP_009016356.1 | NC_023723_p91 | hypothetical protein | phrog_5017 | unknown function | unknown function | -1 | 51156 | 51503 |
YP_009016267.1 | NC_023723_p2 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 926 | 1360 |
YP_009016343.1 | NC_023723_p78 | hypothetical protein | phrog_3851 | unknown function | unknown function | -1 | 47306 | 47620 |
YP_009016361.1 | NC_023723_p96 | hypothetical protein | phrog_17708 | unknown function | unknown function | 1 | 52445 | 52606 |
YP_009016307.1 | NC_023723_p42 | hypothetical protein | phrog_2035 | unknown function | unknown function | -1 | 31796 | 31975 |
YP_009016340.1 | NC_023723_p75 | hypothetical protein | phrog_11473 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46296 | 46778 |
YP_009016352.1 | NC_023723_p87 | hypothetical protein | phrog_11336 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 50147 | 50341 |
YP_009016282.1 | NC_023723_p17 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 11926 | 12924 |
YP_009016300.1 | NC_023723_p35 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27869 | 28192 |
YP_009016296.1 | NC_023723_p31 | minor tail protein | phrog_981 | minor tail protein | tail | 1 | 23739 | 24086 |
YP_009016339.1 | NC_023723_p74 | hypothetical protein | phrog_12774 | unknown function | unknown function | -1 | 46011 | 46283 |
YP_009016329.1 | NC_023723_p64 | hypothetical protein | phrog_1019 | unknown function | unknown function | -1 | 42745 | 42831 |
YP_009016349.1 | NC_023723_p84 | hypothetical protein | phrog_1387 | unknown function | unknown function | -1 | 49562 | 49765 |
YP_009016270.1 | NC_023723_p5 | hypothetical protein | phrog_4371 | unknown function | unknown function | 1 | 2124 | 2384 |
YP_009016305.1 | NC_023723_p40 | integrase | phrog_95 | integrase | integration and excision | 1 | 29906 | 31408 |
YP_009016357.1 | NC_023723_p92 | hypothetical protein | phrog_5533 | unknown function | unknown function | -1 | 51503 | 51688 |
YP_009016360.1 | NC_023723_p95 | hypothetical protein | phrog_828 | unknown function | unknown function | 1 | 52191 | 52397 |
YP_009016335.1 | NC_023723_p70 | hypothetical protein | phrog_1763 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 44575 | 44757 |
YP_009016325.1 | NC_023723_p60 | hypothetical protein | phrog_1783 | unknown function | unknown function | -1 | 40742 | 40906 |
YP_009016272.1 | NC_023723_p7 | structural protein | phrog_553 | minor tail protein | tail | 1 | 3480 | 4181 |
YP_009016291.1 | NC_023723_p26 | tapemeasure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16694 | 19174 |
YP_009016330.1 | NC_023723_p65 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 42828 | 43097 |
YP_009016311.1 | NC_023723_p46 | HNH endonuclease domain protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32721 | 33206 |
YP_009016301.1 | NC_023723_p36 | hypothetical protein | phrog_1560 | unknown function | unknown function | 1 | 28202 | 28393 |
YP_009016274.1 | NC_023723_p9 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 4463 | 4720 |
YP_009016273.1 | NC_023723_p8 | structural protein | phrog_1718 | tail protein | tail | 1 | 4195 | 4455 |
YP_009016331.1 | NC_023723_p66 | DnaB-like helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 43094 | 43903 |
YP_009016318.1 | NC_023723_p53 | phosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 36847 | 38565 |
YP_009016286.1 | NC_023723_p21 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14057 | 14452 |
YP_009016313.1 | NC_023723_p48 | hypothetical protein | phrog_1781 | unknown function | unknown function | -1 | 35008 | 35238 |
YP_009016346.1 | NC_023723_p81 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 48828 | 49127 |
YP_009016295.1 | NC_023723_p30 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 23296 | 23742 |
YP_009016344.1 | NC_023723_p79 | hypothetical protein | phrog_1809 | unknown function | unknown function | -1 | 47617 | 48021 |
YP_009016328.1 | NC_023723_p63 | EndoVII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 42216 | 42758 |
YP_009016285.1 | NC_023723_p20 | hypothetical protein | phrog_320 | head closure Hc1 | connector | 1 | 13695 | 14057 |
YP_009016347.1 | NC_023723_p82 | hypothetical protein | phrog_6474 | recombination directionality factor | integration and excision | -1 | 49120 | 49299 |
YP_009016269.1 | NC_023723_p4 | hypothetical protein | phrog_26323 | unknown function | unknown function | 1 | 1899 | 2072 |
YP_009016303.1 | NC_023723_p38 | hypothetical protein | phrog_23708 | unknown function | unknown function | 1 | 28998 | 29336 |
YP_009016364.1 | NC_023723_p99 | hypothetical protein | phrog_15488 | unknown function | unknown function | -1 | 53033 | 53617 |
YP_009016283.1 | NC_023723_p18 | hypothetical protein | phrog_1857 | head-tail connector protein | connector | 1 | 13010 | 13246 |
YP_009016321.1 | NC_023723_p56 | hypothetical protein | phrog_5618 | unknown function | unknown function | -1 | 39136 | 39462 |
YP_009016317.1 | NC_023723_p52 | hypothetical protein | phrog_1782 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36702 | 36872 |
YP_009016266.1 | NC_023723_p1 | HNH endonuclease domain protein | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 595 | 891 |
YP_009016293.1 | NC_023723_p28 | minor tail protein | phrog_1543 | minor tail protein | tail | 1 | 21274 | 21456 |
YP_009016320.1 | NC_023723_p55 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38738 | 39139 |
YP_009016354.1 | NC_023723_p89 | hypothetical protein | phrog_932 | unknown function | unknown function | -1 | 50564 | 50713 |
YP_009016294.1 | NC_023723_p29 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21456 | 23258 |
YP_009016314.1 | NC_023723_p49 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 35269 | 35748 |
YP_009016281.1 | NC_023723_p16 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11404 | 11916 |
YP_009016280.1 | NC_023723_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10465 | 11346 |
YP_009016316.1 | NC_023723_p51 | hypothetical protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35924 | 36709 |
YP_009016319.1 | NC_023723_p54 | hypothetical protein | phrog_1503 | unknown function | unknown function | -1 | 38562 | 38741 |
YP_009016337.1 | NC_023723_p72 | hypothetical protein | phrog_13492 | unknown function | unknown function | -1 | 45584 | 45835 |
YP_009016326.1 | NC_023723_p61 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 40968 | 41102 |
YP_009016276.1 | NC_023723_p11 | hypothetical protein | phrog_21042 | unknown function | unknown function | 1 | 6117 | 6353 |
YP_009016299.1 | NC_023723_p34 | D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26301 | 27779 |
YP_009016292.1 | NC_023723_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19198 | 21255 |
YP_009016336.1 | NC_023723_p71 | RecB-like protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 44784 | 45587 |
YP_009016322.1 | NC_023723_p57 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39459 | 39983 |
YP_009016287.1 | NC_023723_p22 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 14456 | 14902 |
YP_009016333.1 | NC_023723_p68 | hypothetical protein | phrog_780 | unknown function | unknown function | -1 | 44033 | 44278 |
YP_009016362.1 | NC_023723_p97 | hypothetical protein | phrog_3574 | unknown function | unknown function | 1 | 52710 | 52898 |
YP_009016350.1 | NC_023723_p85 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 49762 | 49950 |
YP_009016271.1 | NC_023723_p6 | structural protein | phrog_1197 | tail protein | tail | 1 | 2400 | 3470 |
YP_009016312.1 | NC_023723_p47 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 33184 | 34971 |
YP_009016306.1 | NC_023723_p41 | hypothetical protein | phrog_1966 | unknown function | unknown function | -1 | 31530 | 31799 |
YP_009016342.1 | NC_023723_p77 | hypothetical protein | phrog_1584 | unknown function | unknown function | -1 | 46992 | 47309 |
YP_009016324.1 | NC_023723_p59 | hypothetical protein | phrog_4160 | unknown function | unknown function | -1 | 40299 | 40763 |
YP_009016278.1 | NC_023723_p13 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7341 | 9029 |
YP_009016310.1 | NC_023723_p45 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 32339 | 32698 |
YP_009016304.1 | NC_023723_p39 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29470 | 29754 |
YP_009016277.1 | NC_023723_p12 | LysB | phrog_102 | endolysin | lysis | 1 | 6353 | 7321 |
YP_009016284.1 | NC_023723_p19 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13246 | 13695 |
YP_009016351.1 | NC_023723_p86 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 49950 | 50150 |
YP_009016353.1 | NC_023723_p88 | hypothetical protein | phrog_8345 | unknown function | unknown function | -1 | 50338 | 50544 |
YP_009016363.1 | NC_023723_p98 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52941 | 53057 |
YP_009016358.1 | NC_023723_p93 | hypothetical protein | phrog_2212 | unknown function | unknown function | -1 | 51718 | 51837 |
YP_009016315.1 | NC_023723_p50 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 35745 | 35951 |
YP_009016309.1 | NC_023723_p44 | hypothetical protein | phrog_1971 | unknown function | unknown function | -1 | 32055 | 32342 |
YP_009016327.1 | NC_023723_p62 | DNA methylase | phrog_67 | DNA methyltransferase | other | -1 | 41128 | 42219 |
YP_009016332.1 | NC_023723_p67 | hypothetical protein | phrog_1705 | unknown function | unknown function | -1 | 43890 | 44036 |