Genomic map of Mycobacterium virus Larva (NC_023724)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023724
Definition
Mycobacterium phage Larva, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus.
DB of origin
REFSEQ
Length
62991
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
65.29
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009016404.1 NC_023724_p40 hypothetical protein phrog_950 unknown function unknown function -1 32871 33722
YP_009016454.1 NC_023724_p90 hypothetical protein phrog_2974 unknown function unknown function 1 58791 59036
YP_009016370.1 NC_023724_p6 portal phrog_104 portal protein head and packaging 1 2529 4067
YP_009016388.1 NC_023724_p24 hypothetical protein phrog_1736 minor tail protein tail 1 20760 21077
YP_009016372.1 NC_023724_p8 hypothetical protein phrog_1757 unknown function unknown function 1 6888 7088
YP_009016374.1 NC_023724_p10 major capsid phrog_10 major head protein head and packaging 1 7861 8793
YP_009016369.1 NC_023724_p5 terminase phrog_2 terminase large subunit head and packaging 1 1090 2517
YP_009016414.1 NC_023724_p50 hypothetical protein phrog_1956 unknown function unknown function 1 38587 38865
YP_009016398.1 NC_023724_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28797 30011
YP_009016440.1 NC_023724_p76 RtcB phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 51909 53114
YP_009016410.1 NC_023724_p46 hypothetical protein phrog_2781 unknown function unknown function 1 36146 36748
YP_009016380.1 NC_023724_p16 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11076 11962
YP_009016386.1 NC_023724_p22 hypothetical protein phrog_1697 minor tail protein tail 1 19169 19678
YP_009016391.1 NC_023724_p27 hypothetical protein phrog_416 minor tail protein tail 1 23878 24942
YP_009016459.1 NC_023724_p95 hypothetical protein phrog_10342 DNA binding protein DNA, RNA and nucleotide metabolism 1 61188 61580
YP_009016406.1 NC_023724_p42 hypothetical protein phrog_1702 transcriptional repressor transcription regulation 1 34386 34733
YP_009016383.1 NC_023724_p19 minor tail subunit phrog_106 minor tail protein tail 1 16169 17299
YP_009016424.1 NC_023724_p60 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 41955 42203
YP_009016401.1 NC_023724_p37 hypothetical protein phrog_21189 hydrolase other -1 30940 31071
YP_009016452.1 NC_023724_p88 hypothetical protein phrog_10190 DNA binding protein DNA, RNA and nucleotide metabolism 1 57490 57888
YP_009016417.1 NC_023724_p53 hypothetical protein phrog_2870 unknown function unknown function 1 39273 39545
YP_009016435.1 NC_023724_p71 hypothetical protein phrog_5135 unknown function unknown function 1 49851 50186
YP_009016437.1 NC_023724_p73 hypothetical protein phrog_3868 unknown function unknown function 1 50393 50875
YP_009016447.1 NC_023724_p83 hypothetical protein phrog_19470 unknown function unknown function 1 55610 55762
YP_009016416.1 NC_023724_p52 hypothetical protein phrog_4832 unknown function unknown function 1 39040 39204
YP_009016418.1 NC_023724_p54 hypothetical protein phrog_1498 unknown function unknown function 1 39542 39709
YP_009016436.1 NC_023724_p72 hypothetical protein phrog_2869 unknown function unknown function 1 50174 50380
YP_009016443.1 NC_023724_p79 hypothetical protein phrog_16134 unknown function unknown function 1 54118 54402
YP_009016430.1 NC_023724_p66 hypothetical protein phrog_908 unknown function unknown function 1 47423 48277
YP_009016434.1 NC_023724_p70 hypothetical protein phrog_7217 unknown function unknown function 1 49603 49854
YP_009016394.1 NC_023724_p30 LysB phrog_102 endolysin lysis 1 27026 27787
YP_009016415.1 NC_023724_p51 hypothetical protein phrog_10462 unknown function unknown function 1 38862 39017
YP_009016421.1 NC_023724_p57 hypothetical protein phrog_1581 unknown function unknown function 1 40784 40996
YP_009016426.1 NC_023724_p62 hypothetical protein phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42688 43068
YP_009016390.1 NC_023724_p26 hypothetical protein phrog_10753 unknown function unknown function 1 23575 23859
YP_009016392.1 NC_023724_p28 hypothetical protein phrog_240 head protein head and packaging 1 24969 25367
YP_009016399.1 NC_023724_p35 hypothetical protein phrog_1042 unknown function unknown function 1 30011 30235
YP_009016431.1 NC_023724_p67 hypothetical protein phrog_5505 unknown function unknown function 1 48347 48556
YP_009016427.1 NC_023724_p63 hypothetical protein phrog_10729 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 43099 45267
YP_009016409.1 NC_023724_p45 hypothetical protein phrog_2286 unknown function unknown function 1 35352 36107
YP_009016439.1 NC_023724_p75 hypothetical protein phrog_9980 unknown function unknown function 1 51175 51756
YP_009016382.1 NC_023724_p18 tapemeasure phrog_971 endolysin lysis 1 11980 16092
YP_009016397.1 NC_023724_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28559 28810
YP_009016371.1 NC_023724_p7 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4084 6891
YP_009016403.1 NC_023724_p39 hypothetical protein phrog_24177 unknown function unknown function 1 32705 32851
YP_009016438.1 NC_023724_p74 hypothetical protein phrog_8324 unknown function unknown function 1 50872 51105
YP_009016378.1 NC_023724_p14 hypothetical protein phrog_123 tail terminator connector 1 9904 10326
YP_009016387.1 NC_023724_p23 minor tail subunit phrog_1565 minor tail protein tail 1 19675 20760
YP_009016423.1 NC_023724_p59 hypothetical protein phrog_1911 unknown function unknown function 1 41253 41846
YP_009016441.1 NC_023724_p77 hypothetical protein phrog_3167 unknown function unknown function 1 53119 53481
YP_009016413.1 NC_023724_p49 hypothetical protein phrog_9124 unknown function unknown function 1 38366 38590
YP_009016412.1 NC_023724_p48 hypothetical protein phrog_301 secreted protein other 1 38025 38363
YP_009016419.1 NC_023724_p55 hypothetical protein phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 39706 40566
YP_009016445.1 NC_023724_p81 hypothetical protein phrog_980 unknown function unknown function 1 55057 55344
YP_009016379.1 NC_023724_p15 major tail subunit phrog_117 major tail protein tail 1 10368 10979
YP_009016389.1 NC_023724_p25 minor tail subunit phrog_346 minor tail protein tail 1 21061 23565
YP_009016384.1 NC_023724_p20 minor tail subunit phrog_110 minor tail protein tail 1 17347 18558
YP_009016400.1 NC_023724_p36 hypothetical protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 30358 30822
YP_009016450.1 NC_023724_p86 hypothetical protein phrog_20186 unknown function unknown function 1 56967 57146
YP_009016420.1 NC_023724_p56 hypothetical protein phrog_10500 unknown function unknown function 1 40563 40787
YP_009016448.1 NC_023724_p84 hypothetical protein phrog_19954 unknown function unknown function 1 55797 55964
YP_009016425.1 NC_023724_p61 hypothetical protein phrog_10696 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42200 42691
YP_009016395.1 NC_023724_p31 holin phrog_565 holin lysis 1 27784 28236
YP_009016407.1 NC_023724_p43 hypothetical protein phrog_2908 unknown function unknown function 1 34740 35030
YP_009016381.1 NC_023724_p17 tail assembly chaperone phrog_1861 unknown function unknown function 1 11076 11567
YP_009016451.1 NC_023724_p87 hypothetical protein phrog_9985 unknown function unknown function 1 57210 57488
YP_009016442.1 NC_023724_p78 hypothetical protein phrog_2822 unknown function unknown function 1 53481 54125
YP_009016367.1 NC_023724_p3 hypothetical protein singleton unknown function unknown function 1 418 513
YP_009016461.1 NC_023724_p97 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62571 62876
YP_009016385.1 NC_023724_p21 hypothetical protein phrog_20962 minor tail protein tail 1 18635 19168
YP_009016375.1 NC_023724_p11 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8924 9307
YP_009016393.1 NC_023724_p29 LysA phrog_317 endolysin lysis 1 25395 27029
YP_009016396.1 NC_023724_p32 hypothetical protein phrog_404 minor tail protein tail 1 28233 28562
YP_009016368.1 NC_023724_p4 hypothetical protein phrog_1459 terminase small subunit head and packaging 1 738 1097
YP_009016429.1 NC_023724_p65 RusA phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47058 47423
YP_009016460.1 NC_023724_p96 hypothetical protein phrog_12460 unknown function unknown function 1 62105 62515
YP_009016433.1 NC_023724_p69 regulator phrog_2342 unknown function unknown function 1 48752 49606
YP_009016376.1 NC_023724_p12 hypothetical protein phrog_763 head-tail adaptor connector 1 9307 9669
YP_009016411.1 NC_023724_p47 DNA pol III phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 36790 37974
YP_009016456.1 NC_023724_p92 hypothetical protein phrog_6842 unknown function unknown function 1 60240 60572
YP_009016453.1 NC_023724_p89 hypothetical protein phrog_2433 unknown function unknown function 1 58023 58709
YP_009016377.1 NC_023724_p13 hypothetical protein phrog_387 neck protein connector 1 9641 9907
YP_009016444.1 NC_023724_p80 hypothetical protein phrog_2493 unknown function unknown function 1 54395 55066
YP_009016402.1 NC_023724_p38 integrase, S-int phrog_95 integrase integration and excision 1 31141 32586
YP_009016365.1 NC_023724_p1 hypothetical protein phrog_10556 unknown function unknown function 1 55 303
YP_009016446.1 NC_023724_p82 hypothetical protein phrog_3665 unknown function unknown function 1 55305 55484
YP_009016405.1 NC_023724_p41 hypothetical protein phrog_1746 transcriptional repressor transcription regulation -1 33849 34253
YP_009016422.1 NC_023724_p58 hypothetical protein phrog_2388 unknown function unknown function 1 40993 41172
YP_009016449.1 NC_023724_p85 queuine tRNA-ribosyltransferase phrog_1279 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 56016 56900
YP_009016366.1 NC_023724_p2 hypothetical protein singleton unknown function unknown function 1 300 473
YP_009016428.1 NC_023724_p64 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 45264 46979
YP_009016432.1 NC_023724_p68 hypothetical protein phrog_11424 unknown function unknown function 1 48591 48755
YP_009016408.1 NC_023724_p44 hypothetical protein phrog_11593 unknown function unknown function 1 35108 35260
YP_009016458.1 NC_023724_p94 hypothetical protein phrog_38546 unknown function unknown function 1 61037 61198
YP_009016455.1 NC_023724_p91 hypothetical protein phrog_7638 unknown function unknown function 1 59154 60029
YP_009016457.1 NC_023724_p93 hypothetical protein phrog_8588 unknown function unknown function 1 60677 60988
YP_009016373.1 NC_023724_p9 scaffolding phrog_1793 head scaffolding protein head and packaging 1 7222 7788