Genomic map of Mycobacterium virus Euphoria (NC_023726)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023726
Definition
Mycobacterium phage Euphoria, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
53597
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
94
%GC
63.67
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009016780.1 NC_023726_p85 hypothetical protein phrog_2093 unknown function unknown function -1 49109 49237
YP_009016786.1 NC_023726_p91 hypothetical protein phrog_36632 unknown function unknown function -1 51996 52427
YP_009016762.1 NC_023726_p67 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 42680 42862
YP_009016787.1 NC_023726_p92 hypothetical protein phrog_5542 unknown function unknown function -1 52440 52790
YP_009016737.1 NC_023726_p42 hypothetical protein phrog_383 unknown function unknown function -1 31925 32305
YP_009016758.1 NC_023726_p63 hypothetical protein phrog_2507 unknown function unknown function -1 41768 41953
YP_009016766.1 NC_023726_p71 hypothetical protein phrog_4604 unknown function unknown function -1 45056 45517
YP_009016719.1 NC_023726_p24 tapemeasure phrog_305 tail length tape measure protein tail 1 16340 18808
YP_009016741.1 NC_023726_p46 hypothetical protein phrog_499 unknown function unknown function -1 34914 35099
YP_009016730.1 NC_023726_p35 hypothetical protein phrog_754 minor tail protein tail 1 28029 28874
YP_009016728.1 NC_023726_p33 hypothetical protein phrog_644 unknown function unknown function 1 27428 27829
YP_009016749.1 NC_023726_p54 hypothetical protein phrog_1783 unknown function unknown function -1 39172 39336
YP_009016702.1 NC_023726_p7 hypothetical protein phrog_1718 tail protein tail 1 4062 4322
YP_009016714.1 NC_023726_p19 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 13717 14112
YP_009016713.1 NC_023726_p18 hypothetical protein phrog_320 head closure Hc1 connector 1 13355 13717
YP_009016721.1 NC_023726_p26 hypothetical protein phrog_1543 minor tail protein tail 1 20908 21090
YP_009016789.1 NC_023726_p94 hypothetical protein phrog_828 unknown function unknown function -1 52985 53188
YP_009016729.1 NC_023726_p34 hypothetical protein phrog_1560 unknown function unknown function 1 27838 28029
YP_009016734.1 NC_023726_p39 hypothetical protein phrog_2035 unknown function unknown function -1 31376 31555
YP_009016698.1 NC_023726_p3 hypothetical protein phrog_226 minor tail protein tail 1 1067 1501
YP_009016753.1 NC_023726_p58 hypothetical protein phrog_1019 unknown function unknown function -1 40026 40112
YP_009016735.1 NC_023726_p40 hypothetical protein phrog_1860 unknown function unknown function -1 31543 31638
YP_009016777.1 NC_023726_p82 hypothetical protein phrog_12963 unknown function unknown function -1 48428 48664
YP_009016703.1 NC_023726_p8 hypothetical protein phrog_747 unknown function unknown function 1 4330 4587
YP_009016745.1 NC_023726_p50 hypothetical protein phrog_1503 unknown function unknown function -1 37740 37919
YP_009016768.1 NC_023726_p73 hypothetical protein phrog_5947 unknown function unknown function -1 45620 45787
YP_009016765.1 NC_023726_p70 hypothetical protein phrog_4285 transposase integration and excision -1 44013 44720
YP_009016751.1 NC_023726_p56 hypothetical protein phrog_397 unknown function unknown function -1 39404 39547
YP_009016755.1 NC_023726_p60 NrdH phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 40552 40818
YP_009016750.1 NC_023726_p55 hypothetical protein phrog_5801 unknown function unknown function -1 39336 39407
YP_009016723.1 NC_023726_p28 hypothetical protein phrog_352 minor tail protein tail 1 22930 23376
YP_009016727.1 NC_023726_p32 D-Ala-D-Ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 25935 27419
YP_009016767.1 NC_023726_p72 hypothetical protein phrog_6068 unknown function unknown function -1 45514 45627
YP_009016756.1 NC_023726_p61 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40818 41639
YP_009016716.1 NC_023726_p21 major tail subunit phrog_117 major tail protein tail 1 14571 15419
YP_009016738.1 NC_023726_p43 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 32302 34128
YP_009016775.1 NC_023726_p80 hypothetical protein phrog_1387 unknown function unknown function -1 48043 48246
YP_009016704.1 NC_023726_p9 lysin A phrog_317 endolysin lysis 1 4597 6018
YP_009016711.1 NC_023726_p16 hypothetical protein phrog_1857 head-tail connector protein connector 1 12646 12906
YP_009016740.1 NC_023726_p45 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 34426 34917
YP_009016763.1 NC_023726_p68 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42889 43689
YP_009016769.1 NC_023726_p74 hypothetical protein phrog_1584 unknown function unknown function -1 45784 46101
YP_009016739.1 NC_023726_p44 hypothetical protein phrog_1781 unknown function unknown function -1 34165 34395
YP_009016699.1 NC_023726_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1673 1984
YP_009016746.1 NC_023726_p51 hypothetical protein phrog_474 phosphofructokinase other -1 37916 38314
YP_009016770.1 NC_023726_p75 hypothetical protein phrog_1809 unknown function unknown function -1 46098 46502
YP_009016788.1 NC_023726_p93 hypothetical protein phrog_2212 unknown function unknown function -1 52793 52885
YP_009016708.1 NC_023726_p13 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10120 11001
YP_009016776.1 NC_023726_p81 hypothetical protein phrog_1155 unknown function unknown function -1 48243 48431
YP_009016761.1 NC_023726_p66 hypothetical protein phrog_2184 unknown function unknown function -1 42356 42676
YP_009016757.1 NC_023726_p62 hypothetical protein phrog_31337 unknown function unknown function -1 41662 41778
YP_009016779.1 NC_023726_p84 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 48945 49112
YP_009016696.1 NC_023726_p1 hypothetical protein phrog_21009 unknown function unknown function 1 600 755
YP_009016736.1 NC_023726_p41 hypothetical protein phrog_1971 unknown function unknown function -1 31635 31928
YP_009016785.1 NC_023726_p90 hypothetical protein phrog_5017 unknown function unknown function -1 51682 51996
YP_009016744.1 NC_023726_p49 RDF phrog_221 metallo-phosphoesterase other -1 36025 37743
YP_009016710.1 NC_023726_p15 major capsid phrog_10 major head protein head and packaging 1 11582 12589
YP_009016718.1 NC_023726_p23 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15528 15905
YP_009016783.1 NC_023726_p88 hypothetical protein phrog_3414 unknown function unknown function -1 50706 50990
YP_009016748.1 NC_023726_p53 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38783 39193
YP_009016725.1 NC_023726_p30 hypothetical protein phrog_1397 unknown function unknown function 1 23717 24064
YP_009016726.1 NC_023726_p31 minor tail subunit phrog_346 minor tail protein tail 1 24089 25942
YP_009016705.1 NC_023726_p10 lysin B phrog_102 endolysin lysis 1 6008 6976
YP_009016759.1 NC_023726_p64 hypothetical protein phrog_1705 unknown function unknown function -1 41950 42069
YP_009016700.1 NC_023726_p5 structural phrog_1197 tail protein tail 1 2267 3337
YP_009016731.1 NC_023726_p36 hypothetical protein phrog_411 unknown function unknown function 1 28995 29279
YP_009016724.1 NC_023726_p29 hypothetical protein phrog_981 minor tail protein tail 1 23373 23720
YP_009016706.1 NC_023726_p11 terminase phrog_9 terminase large subunit head and packaging 1 6996 8684
YP_009016747.1 NC_023726_p52 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38311 38955
YP_009016707.1 NC_023726_p12 portal phrog_104 portal protein head and packaging 1 8681 10123
YP_009016778.1 NC_023726_p83 hypothetical protein phrog_16402 unknown function unknown function -1 48661 48807
YP_009016781.1 NC_023726_p86 hypothetical protein phrog_932 unknown function unknown function -1 49259 49408
YP_009016772.1 NC_023726_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47309 47608
YP_009016771.1 NC_023726_p76 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 46535 47047
YP_009016722.1 NC_023726_p27 minor tail subunit phrog_110 minor tail protein tail 1 21090 22892
YP_009016760.1 NC_023726_p65 hypothetical protein phrog_520 unknown function unknown function -1 42066 42359
YP_009016754.1 NC_023726_p59 hypothetical protein phrog_1573 DNA methyltransferase other -1 40109 40555
YP_009016733.1 NC_023726_p38 hypothetical protein phrog_1966 unknown function unknown function -1 31107 31379
YP_009016709.1 NC_023726_p14 scaffolding phrog_233 head scaffolding protein head and packaging 1 11059 11571
YP_009016720.1 NC_023726_p25 minor tail subunit phrog_106 minor tail protein tail 1 18832 20889
YP_009016784.1 NC_023726_p89 hypothetical protein phrog_2985 unknown function unknown function -1 51284 51439
YP_009016782.1 NC_023726_p87 DNA methylase phrog_363 DNA methyltransferase other -1 49890 50663
YP_009016715.1 NC_023726_p20 hypothetical protein phrog_123 tail terminator connector 1 14116 14562
YP_009016701.1 NC_023726_p6 hypothetical protein phrog_553 minor tail protein tail 1 3347 4048
YP_009016732.1 NC_023726_p37 integrase (S-int) phrog_95 integrase integration and excision 1 29484 30986
YP_009016712.1 NC_023726_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 12906 13355
YP_009016697.1 NC_023726_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 736 1032
YP_009016764.1 NC_023726_p69 hypothetical protein phrog_8167 unknown function unknown function -1 43689 43997
YP_009016774.1 NC_023726_p79 hypothetical protein phrog_1720 unknown function unknown function -1 47777 48046
YP_009016742.1 NC_023726_p47 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 35096 35887
YP_009016773.1 NC_023726_p78 hypothetical protein phrog_6474 recombination directionality factor integration and excision -1 47601 47780
YP_009016743.1 NC_023726_p48 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 35880 36020
YP_009016717.1 NC_023726_p22 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15528 16327
YP_009016752.1 NC_023726_p57 endo VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39566 40039