Genomic map of Mycobacterium phage Redi (NC_023730)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023730
Definition
Mycobacterium phage Redi, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Nclasvirinae; Redivirus.
DB of origin
REFSEQ
Length
42594
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
66.14
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009017132.1 NC_023730_p68 protein of an unannotated phage phrog_1385 unknown function unknown function 1 41877 42122
YP_009017106.1 NC_023730_p42 protein of an unannotated phage phrog_5081 unknown function unknown function 1 30202 30669
YP_009017073.1 NC_023730_p9 protein of an unannotated phage phrog_1531 head closure connector 1 6479 6823
YP_009017090.1 NC_023730_p26 protein of an unannotated phage phrog_526 holin lysis 1 23389 23793
YP_009017082.1 NC_023730_p18 protein of an unannotated phage phrog_110 minor tail protein tail 1 14993 16702
YP_009017129.1 NC_023730_p65 protein of an unannotated phage phrog_27168 unknown function unknown function 1 40992 41258
YP_009017066.1 NC_023730_p2 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 512 2044
YP_009017110.1 NC_023730_p46 protein of an unannotated phage phrog_11875 unknown function unknown function 1 32062 32235
YP_009017093.1 NC_023730_p29 protein of an unannotated phage phrog_38264 unknown function unknown function 1 25182 25361
YP_009017130.1 NC_023730_p66 protein of an unannotated phage phrog_1694 unknown function unknown function 1 41261 41485
YP_009017088.1 NC_023730_p24 protein of an unannotated phage phrog_1172 unknown function unknown function 1 21647 21823
YP_009017074.1 NC_023730_p10 protein of an unannotated phage phrog_8006 neck protein connector 1 6836 7033
YP_009017118.1 NC_023730_p54 protein of an unannotated phage phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35783 36175
YP_009017077.1 NC_023730_p13 protein of an unannotated phage phrog_476 major tail protein tail 1 7923 8981
YP_009017133.1 NC_023730_p69 protein of an unannotated phage phrog_35672 unknown function unknown function -1 42133 42462
YP_009017111.1 NC_023730_p47 protein of an unannotated phage phrog_36278 unknown function unknown function 1 32232 32360
YP_009017113.1 NC_023730_p49 protein of an unannotated phage phrog_1333 unknown function unknown function 1 32626 33006
YP_009017092.1 NC_023730_p28 protein of an unannotated phage phrog_33457 minor tail protein tail -1 24414 25067
YP_009017112.1 NC_023730_p48 protein of an unannotated phage phrog_8273 unknown function unknown function 1 32357 32629
YP_009017086.1 NC_023730_p22 protein of an unannotated phage phrog_6030 unknown function unknown function 1 21028 21267
YP_009017067.1 NC_023730_p3 protein of an unannotated phage phrog_6750 unknown function unknown function 1 2037 2246
YP_009017124.1 NC_023730_p60 protein of an unannotated phage phrog_30312 unknown function unknown function 1 38126 38245
YP_009017084.1 NC_023730_p20 protein of an unannotated phage phrog_3493 minor tail protein tail 1 17560 19866
YP_009017108.1 NC_023730_p44 protein of an unannotated phage phrog_15773 unknown function unknown function 1 31044 31706
YP_009017087.1 NC_023730_p23 protein of an unannotated phage phrog_240 head protein head and packaging 1 21267 21647
YP_009017121.1 NC_023730_p57 protein of an unannotated phage phrog_11218 unknown function unknown function 1 36815 37108
YP_009017126.1 NC_023730_p62 protein of an unannotated phage phrog_3599 unknown function unknown function 1 39142 39744
YP_009017083.1 NC_023730_p19 protein of an unannotated phage phrog_732 minor tail protein tail 1 16718 17560
YP_009017072.1 NC_023730_p8 protein of an unannotated phage phrog_442 head-tail adaptor connector 1 5997 6482
YP_009017071.1 NC_023730_p7 protein of an unannotated phage phrog_7530 unknown function unknown function 1 5753 6004
YP_009017122.1 NC_023730_p58 protein of an unannotated phage phrog_5505 unknown function unknown function 1 37108 37323
YP_009017128.1 NC_023730_p64 protein of an unannotated phage phrog_908 unknown function unknown function 1 40183 40848
YP_009017119.1 NC_023730_p55 protein of an unannotated phage phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 36172 36420
YP_009017065.1 NC_023730_p1 protein of an unannotated phage phrog_6975 unknown function unknown function 1 63 512
YP_009017078.1 NC_023730_p14 protein of an unannotated phage phrog_978 tail assembly chaperone tail 1 9081 9987
YP_009017094.1 NC_023730_p30 protein of an unannotated phage phrog_32282 unknown function unknown function 1 25369 25776
YP_009017107.1 NC_023730_p43 protein of an unannotated phage phrog_15628 unknown function unknown function 1 30733 31047
YP_009017131.1 NC_023730_p67 protein of an unannotated phage phrog_1186 unknown function unknown function 1 41425 41880
YP_009017116.1 NC_023730_p52 protein of an unannotated phage phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34363 35427
YP_009017099.1 NC_023730_p35 protein of an unannotated phage phrog_16514 unknown function unknown function -1 27478 27630
YP_009017085.1 NC_023730_p21 protein of an unannotated phage phrog_416 minor tail protein tail 1 19877 21031
YP_009017102.1 NC_023730_p38 protein of an unannotated phage phrog_2328 transcriptional repressor transcription regulation -1 29039 29410
YP_009017117.1 NC_023730_p53 protein of an unannotated phage phrog_4387 unknown function unknown function 1 35424 35786
YP_009017095.1 NC_023730_p31 protein of an unannotated phage phrog_32886 unknown function unknown function 1 25979 26173
YP_009017105.1 NC_023730_p41 protein of an unannotated phage phrog_10253 unknown function unknown function 1 30080 30205
YP_009017080.1 NC_023730_p16 protein of an unannotated phage phrog_2337 tail length tape measure protein tail 1 10169 13270
YP_009017079.1 NC_023730_p15 protein of an unannotated phage phrog_621 tail assembly chaperone tail 1 9081 9611
YP_009017125.1 NC_023730_p61 protein of an unannotated phage phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 38267 39145
YP_009017069.1 NC_023730_p5 protein of an unannotated phage phrog_80 head maturation protease head and packaging 1 3555 4361
YP_009017104.1 NC_023730_p40 protein of an unannotated phage phrog_3507 unknown function unknown function 1 29772 30083
YP_009017098.1 NC_023730_p34 protein of an unannotated phage phrog_353 toxin moron, auxiliary metabolic gene and host takeover -1 27213 27428
YP_009017101.1 NC_023730_p37 protein of an unannotated phage phrog_1 integrase integration and excision -1 28064 28951
YP_009017120.1 NC_023730_p56 protein of an unannotated phage phrog_6650 unknown function unknown function 1 36417 36818
YP_009017127.1 NC_023730_p63 protein of an unannotated phage phrog_15405 unknown function unknown function 1 39731 40186
YP_009017081.1 NC_023730_p17 protein of an unannotated phage phrog_106 minor tail protein tail 1 13272 14993
YP_009017115.1 NC_023730_p51 protein of an unannotated phage phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 33347 34357
YP_009017114.1 NC_023730_p50 protein of an unannotated phage phrog_11506 unknown function unknown function 1 33003 33350
YP_009017091.1 NC_023730_p27 protein of an unannotated phage phrog_404 minor tail protein tail 1 23790 24299
YP_009017097.1 NC_023730_p33 protein of an unannotated phage phrog_8245 HicB-like antitoxin moron, auxiliary metabolic gene and host takeover -1 26833 27216
YP_009017103.1 NC_023730_p39 protein of an unannotated phage phrog_4583 transcriptional repressor transcription regulation 1 29533 29775
YP_009017076.1 NC_023730_p12 protein of an unannotated phage phrog_813 head-tail adaptor connector 1 7388 7807
YP_009017075.1 NC_023730_p11 protein of an unannotated phage phrog_2325 minor tail protein tail 1 7020 7391
YP_009017070.1 NC_023730_p6 protein of an unannotated phage phrog_10 major head protein head and packaging 1 4389 5684
YP_009017109.1 NC_023730_p45 protein of an unannotated phage phrog_658 unknown function unknown function 1 31703 32065
YP_009017089.1 NC_023730_p25 protein of an unannotated phage phrog_1519 endolysin lysis 1 21893 23392
YP_009017068.1 NC_023730_p4 protein of an unannotated phage phrog_12 portal protein head and packaging 1 2263 3552
YP_009017123.1 NC_023730_p59 protein of an unannotated phage phrog_25663 unknown function unknown function 1 37320 38129
YP_009017100.1 NC_023730_p36 protein of an unannotated phage phrog_1712 unknown function unknown function -1 27680 28018
YP_009017096.1 NC_023730_p32 protein of an unannotated phage phrog_31065 unknown function unknown function -1 26262 26819