Genomic map of Mycobacterium phage Trixie (NC_023731)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023731
Definition
Mycobacterium phage Trixie, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
53526
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
92
%GC
64.46
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009017212.1 NC_023731_p79 hypothetical protein phrog_1875 unknown function unknown function -1 47543 47785
YP_009017145.1 NC_023731_p12 lysin B phrog_102 endolysin lysis 1 8087 9064
YP_009017152.1 NC_023731_p19 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 15031 15408
YP_009017172.1 NC_023731_p39 hypothetical protein phrog_2099 unknown function unknown function -1 29252 29551
YP_009017163.1 NC_023731_p30 hypothetical protein phrog_352 minor tail protein tail 1 23642 24088
YP_009017199.1 NC_023731_p66 hypothetical protein phrog_2731 unknown function unknown function -1 42679 42816
YP_009017178.1 NC_023731_p45 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32434 33165
YP_009017164.1 NC_023731_p31 hypothetical protein phrog_404 minor tail protein tail 1 24085 24438
YP_009017171.1 NC_023731_p38 hypothetical protein phrog_383 unknown function unknown function -1 28888 29265
YP_009017208.1 NC_023731_p75 hypothetical protein phrog_4294 unknown function unknown function -1 46703 46861
YP_009017201.1 NC_023731_p68 antirepressor phrog_130 anti-repressor Ant transcription regulation -1 43045 43815
YP_009017166.1 NC_023731_p33 integrase (Y-int) phrog_1 integrase integration and excision -1 26259 27323
YP_009017189.1 NC_023731_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38794 39186
YP_009017148.1 NC_023731_p15 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12460 13212
YP_009017225.1 NC_023731_p92 hypothetical protein phrog_1676 unknown function unknown function -1 52047 52346
YP_009017169.1 NC_023731_p36 hypothetical protein phrog_13926 unknown function unknown function -1 28510 28710
YP_009017184.1 NC_023731_p51 hypothetical protein phrog_2436 unknown function unknown function -1 36877 37029
YP_009017220.1 NC_023731_p87 hypothetical protein phrog_519 unknown function unknown function -1 50242 50409
YP_009017167.1 NC_023731_p34 DNA binding domain phrog_733 excisionase integration and excision 1 27768 28199
YP_009017192.1 NC_023731_p59 hypothetical protein phrog_2187 unknown function unknown function -1 39833 40009
YP_009017136.1 NC_023731_p3 VIP2 phrog_4491 unknown function unknown function 1 2122 2427
YP_009017197.1 NC_023731_p64 hypothetical protein phrog_1374 unknown function unknown function -1 41654 41830
YP_009017183.1 NC_023731_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36206 36877
YP_009017204.1 NC_023731_p71 RecB-like exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44301 45128
YP_009017156.1 NC_023731_p23 hypothetical protein phrog_123 tail terminator connector 1 16308 16733
YP_009017159.1 NC_023731_p26 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17455 17859
YP_009017205.1 NC_023731_p72 hypothetical protein phrog_1562 unknown function unknown function -1 45125 45538
YP_009017151.1 NC_023731_p18 hypothetical protein phrog_748 head-tail connector protein connector 1 14845 15027
YP_009017165.1 NC_023731_p32 minor tail protein phrog_737 minor tail protein tail 1 24439 26220
YP_009017134.1 NC_023731_p1 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 507 1274
YP_009017158.1 NC_023731_p25 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17455 18284
YP_009017216.1 NC_023731_p83 hypothetical protein phrog_855 unknown function unknown function -1 48976 49116
YP_009017176.1 NC_023731_p43 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31820 32233
YP_009017196.1 NC_023731_p63 hypothetical protein phrog_5101 unknown function unknown function -1 41343 41657
YP_009017198.1 NC_023731_p65 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41863 42669
YP_009017180.1 NC_023731_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33811 35841
YP_009017224.1 NC_023731_p91 hypothetical protein phrog_1392 unknown function unknown function -1 51198 51908
YP_009017190.1 NC_023731_p57 hypothetical protein phrog_1370 unknown function unknown function -1 39255 39389
YP_009017219.1 NC_023731_p86 hypothetical protein phrog_586 unknown function unknown function -1 49794 50150
YP_009017154.1 NC_023731_p21 hypothetical protein phrog_320 head closure Hc1 connector 1 15596 15964
YP_009017161.1 NC_023731_p28 minor tail subunit phrog_106 minor tail protein tail 1 20845 21858
YP_009017222.1 NC_023731_p89 hypothetical protein phrog_8476 unknown function unknown function -1 50621 50923
YP_009017173.1 NC_023731_p40 hypothetical protein phrog_3283 unknown function unknown function -1 29542 29772
YP_009017214.1 NC_023731_p81 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47910 48218
YP_009017147.1 NC_023731_p14 portal phrog_104 portal protein head and packaging 1 10871 12331
YP_009017211.1 NC_023731_p78 hypothetical protein phrog_1178 unknown function unknown function -1 47271 47546
YP_009017179.1 NC_023731_p46 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33275 33814
YP_009017157.1 NC_023731_p24 major tail subunit phrog_117 major tail protein tail 1 16751 17341
YP_009017202.1 NC_023731_p69 hypothetical protein phrog_666 unknown function unknown function -1 43844 44038
YP_009017209.1 NC_023731_p76 hypothetical protein phrog_4569 unknown function unknown function -1 46862 47131
YP_009017193.1 NC_023731_p60 hydrolase phrog_789 esterase/lipase other -1 39991 40833
YP_009017181.1 NC_023731_p48 hypothetical protein phrog_2046 unknown function unknown function -1 35842 36033
YP_009017194.1 NC_023731_p61 hypothetical protein phrog_13419 unknown function unknown function -1 40821 40973
YP_009017213.1 NC_023731_p80 hypothetical protein phrog_1477 unknown function unknown function -1 47782 47910
YP_009017146.1 NC_023731_p13 hypothetical protein phrog_9 terminase large subunit head and packaging 1 9087 10874
YP_009017143.1 NC_023731_p10 lysin A phrog_317 endolysin lysis 1 6376 7671
YP_009017182.1 NC_023731_p49 hypothetical protein phrog_499 unknown function unknown function -1 36030 36209
YP_009017135.1 NC_023731_p2 hypothetical protein phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1367 2125
YP_009017175.1 NC_023731_p42 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30024 31811
YP_009017160.1 NC_023731_p27 tapemeasure phrog_305 tail length tape measure protein tail 1 18274 20811
YP_009017206.1 NC_023731_p73 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45596 46174
YP_009017200.1 NC_023731_p67 hypothetical protein phrog_520 unknown function unknown function -1 42813 43058
YP_009017215.1 NC_023731_p82 hypothetical protein phrog_421 unknown function unknown function -1 48218 48979
YP_009017195.1 NC_023731_p62 hypothetical protein phrog_397 unknown function unknown function -1 40974 41204
YP_009017144.1 NC_023731_p11 holin phrog_526 holin lysis 1 7668 8090
YP_009017138.1 NC_023731_p5 hypothetical protein phrog_226 minor tail protein tail 1 2759 3229
YP_009017177.1 NC_023731_p44 hypothetical protein phrog_690 unknown function unknown function -1 32230 32430
YP_009017153.1 NC_023731_p20 hypothetical protein phrog_830 head-tail connector protein connector 1 15405 15599
YP_009017141.1 NC_023731_p8 hypothetical protein phrog_356 minor tail protein tail 1 5232 5918
YP_009017207.1 NC_023731_p74 hypothetical protein phrog_1173 unknown function unknown function -1 46399 46566
YP_009017137.1 NC_023731_p4 HNH endonuclease domain phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2424 2720
YP_009017142.1 NC_023731_p9 hypothetical protein phrog_1087 unknown function unknown function 1 6218 6376
YP_009017140.1 NC_023731_p7 hypothetical protein phrog_819 tail protein tail 1 4278 5228
YP_009017218.1 NC_023731_p85 hypothetical protein phrog_12268 unknown function unknown function -1 49441 49773
YP_009017168.1 NC_023731_p35 Xis phrog_66 excisionase and transcriptional regulator integration and excision -1 28326 28496
YP_009017174.1 NC_023731_p41 hypothetical protein phrog_896 unknown function unknown function -1 29772 29993
YP_009017191.1 NC_023731_p58 endo VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39415 39882
YP_009017203.1 NC_023731_p70 hypothetical protein phrog_642 unknown function unknown function -1 44035 44253
YP_009017149.1 NC_023731_p16 scaffolding phrog_233 head scaffolding protein head and packaging 1 13264 13788
YP_009017186.1 NC_023731_p53 hypothetical protein phrog_1167 phosphofructokinase other -1 37799 38251
YP_009017162.1 NC_023731_p29 minor tail subunit phrog_110 minor tail protein tail 1 21855 23627
YP_009017188.1 NC_023731_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38334 38966
YP_009017155.1 NC_023731_p22 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 15964 16299
YP_009017185.1 NC_023731_p52 phosphoesterase phrog_221 metallo-phosphoesterase other -1 37032 37802
YP_009017210.1 NC_023731_p77 hypothetical protein phrog_8490 unknown function unknown function -1 47131 47274
YP_009017217.1 NC_023731_p84 hypothetical protein phrog_3718 unknown function unknown function -1 49113 49391
YP_009017187.1 NC_023731_p54 hypothetical protein phrog_2264 unknown function unknown function -1 38248 38334
YP_009017170.1 NC_023731_p37 hypothetical protein phrog_542 unknown function unknown function -1 28718 28891
YP_009017139.1 NC_023731_p6 structural, minor tail phrog_1260 minor tail protein tail 1 3316 4278
YP_009017150.1 NC_023731_p17 major capsid phrog_10 major head protein head and packaging 1 13819 14775
YP_009017221.1 NC_023731_p88 hypothetical protein phrog_1946 unknown function unknown function -1 50406 50621
YP_009017223.1 NC_023731_p90 hypothetical protein phrog_3207 unknown function unknown function -1 50923 51189