| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023732 |
Definition |
Mycobacterium phage Rumpelstiltskin, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus. |
DB of origin |
REFSEQ |
Length |
69279 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
110 |
%GC |
58.91 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009017313.1 | NC_023732_p88 | hypothetical protein | phrog_7890 | unknown function | unknown function | 1 | 58367 | 58477 |
| YP_009017255.1 | NC_023732_p30 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 28020 | 28274 |
| YP_009017304.1 | NC_023732_p79 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 53843 | 54247 |
| YP_009017292.1 | NC_023732_p67 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 46153 | 46332 |
| YP_009017265.1 | NC_023732_p40 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34158 | 34547 |
| YP_009017278.1 | NC_023732_p53 | hypothetical protein | phrog_2380 | unknown function | unknown function | 1 | 39594 | 39833 |
| YP_009017239.1 | NC_023732_p14 | hypothetical protein | phrog_2624 | tail assembly chaperone | tail | 1 | 9991 | 10814 |
| YP_009017226.1 | NC_023732_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 91 | 468 |
| YP_009017318.1 | NC_023732_p93 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 59856 | 60206 |
| YP_009017287.1 | NC_023732_p62 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44153 | 44908 |
| YP_009017301.1 | NC_023732_p76 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 52796 | 53029 |
| YP_009017314.1 | NC_023732_p89 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 58474 | 58713 |
| YP_009017269.1 | NC_023732_p44 | hypothetical protein | phrog_8707 | unknown function | unknown function | 1 | 35516 | 35626 |
| YP_009017284.1 | NC_023732_p59 | hypothetical protein | phrog_7425 | unknown function | unknown function | 1 | 42680 | 42883 |
| YP_009017315.1 | NC_023732_p90 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 58706 | 59044 |
| YP_009017298.1 | NC_023732_p73 | hypothetical protein | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 49330 | 50193 |
| YP_009017243.1 | NC_023732_p18 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 16995 | 18728 |
| YP_009017256.1 | NC_023732_p31 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 28277 | 28699 |
| YP_009017282.1 | NC_023732_p57 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 42197 | 42514 |
| YP_009017302.1 | NC_023732_p77 | hypothetical protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53185 | 53598 |
| YP_009017308.1 | NC_023732_p83 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 55548 | 55766 |
| YP_009017276.1 | NC_023732_p51 | hypothetical protein | phrog_9674 | unknown function | unknown function | 1 | 38698 | 38826 |
| YP_009017316.1 | NC_023732_p91 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59092 | 59505 |
| YP_009017272.1 | NC_023732_p47 | hypothetical protein | phrog_1649 | metallo-phosphoesterase | other | 1 | 36871 | 37905 |
| YP_009017268.1 | NC_023732_p43 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 35173 | 35535 |
| YP_009017262.1 | NC_023732_p37 | hypothetical protein | phrog_10128 | unknown function | unknown function | -1 | 31018 | 31386 |
| YP_009017306.1 | NC_023732_p81 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 54546 | 55112 |
| YP_009017286.1 | NC_023732_p61 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 43838 | 44152 |
| YP_009017317.1 | NC_023732_p92 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 59603 | 59863 |
| YP_009017251.1 | NC_023732_p26 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 24446 | 25354 |
| YP_009017260.1 | NC_023732_p35 | hypothetical protein | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 29648 | 30394 |
| YP_009017293.1 | NC_023732_p68 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 46329 | 47009 |
| YP_009017295.1 | NC_023732_p70 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 48668 | 48922 |
| YP_009017322.1 | NC_023732_p97 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61298 | 61720 |
| YP_009017275.1 | NC_023732_p50 | hypothetical protein | phrog_7316 | unknown function | unknown function | 1 | 38533 | 38661 |
| YP_009017289.1 | NC_023732_p64 | hypothetical protein | phrog_7527 | unknown function | unknown function | 1 | 45105 | 45389 |
| YP_009017333.1 | NC_023732_p108 | hypothetical protein | phrog_16092 | unknown function | unknown function | -1 | 67659 | 67889 |
| YP_009017310.1 | NC_023732_p85 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 57113 | 57292 |
| YP_009017263.1 | NC_023732_p38 | hypothetical protein | phrog_1 | integrase | integration and excision | 1 | 31923 | 33230 |
| YP_009017274.1 | NC_023732_p49 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 38208 | 38525 |
| YP_009017253.1 | NC_023732_p28 | hypothetical protein | phrog_102 | endolysin | lysis | 1 | 26523 | 27551 |
| YP_009017296.1 | NC_023732_p71 | hypothetical protein | phrog_6624 | unknown function | unknown function | 1 | 48955 | 49209 |
| YP_009017257.1 | NC_023732_p32 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 28735 | 28956 |
| YP_009017312.1 | NC_023732_p87 | hypothetical protein | phrog_7495 | unknown function | unknown function | 1 | 57972 | 58367 |
| YP_009017261.1 | NC_023732_p36 | hypothetical protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 30481 | 30942 |
| YP_009017241.1 | NC_023732_p16 | hypothetical protein | phrog_3547 | tail length tape measure protein | tail | 1 | 10856 | 15991 |
| YP_009017300.1 | NC_023732_p75 | hypothetical protein | phrog_505 | polynucleotide kinase | other | 1 | 51761 | 52687 |
| YP_009017324.1 | NC_023732_p99 | hypothetical protein | phrog_3699 | unknown function | unknown function | 1 | 62125 | 62343 |
| YP_009017330.1 | NC_023732_p105 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 64741 | 65592 |
| YP_009017246.1 | NC_023732_p21 | hypothetical protein | phrog_9672 | minor tail protein | tail | 1 | 21036 | 21206 |
| YP_009017277.1 | NC_023732_p52 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 39174 | 39593 |
| YP_009017258.1 | NC_023732_p33 | hypothetical protein | phrog_6558 | unknown function | unknown function | -1 | 29026 | 29370 |
| YP_009017240.1 | NC_023732_p15 | hypothetical protein | phrog_4464 | tail assembly chaperone | tail | 1 | 9991 | 10290 |
| YP_009017230.1 | NC_023732_p5 | hypothetical protein | phrog_104 | portal protein | head and packaging | 1 | 2638 | 4293 |
| YP_009017335.1 | NC_023732_p110 | hypothetical protein | phrog_7398 | unknown function | unknown function | -1 | 68065 | 68448 |
| YP_009017331.1 | NC_023732_p106 | hypothetical protein | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 65802 | 67040 |
| YP_009017309.1 | NC_023732_p84 | hypothetical protein | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55831 | 57129 |
| YP_009017252.1 | NC_023732_p27 | hypothetical protein | phrog_700 | endolysin | lysis | 1 | 25354 | 26523 |
| YP_009017232.1 | NC_023732_p7 | hypothetical protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5422 | 6027 |
| YP_009017291.1 | NC_023732_p66 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45792 | 46190 |
| YP_009017270.1 | NC_023732_p45 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 35623 | 36039 |
| YP_009017303.1 | NC_023732_p78 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 53546 | 53842 |
| YP_009017332.1 | NC_023732_p107 | hypothetical protein | phrog_26032 | unknown function | unknown function | -1 | 67396 | 67662 |
| YP_009017237.1 | NC_023732_p12 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 8471 | 8974 |
| YP_009017231.1 | NC_023732_p6 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 4311 | 5369 |
| YP_009017227.1 | NC_023732_p2 | hypothetical protein | phrog_1496 | terminase small subunit | head and packaging | 1 | 477 | 866 |
| YP_009017307.1 | NC_023732_p82 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 55099 | 55485 |
| YP_009017320.1 | NC_023732_p95 | hypothetical protein | phrog_397 | unknown function | unknown function | 1 | 60986 | 61168 |
| YP_009017233.1 | NC_023732_p8 | hypothetical protein | phrog_283 | major head protein | head and packaging | 1 | 6070 | 7218 |
| YP_009017245.1 | NC_023732_p20 | hypothetical protein | phrog_2689 | minor tail protein | tail | 1 | 19231 | 21030 |
| YP_009017229.1 | NC_023732_p4 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 1069 | 2637 |
| YP_009017319.1 | NC_023732_p94 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 60203 | 60985 |
| YP_009017285.1 | NC_023732_p60 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42925 | 43857 |
| YP_009017328.1 | NC_023732_p103 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 63541 | 64026 |
| YP_009017244.1 | NC_023732_p19 | hypothetical protein | phrog_4413 | minor tail protein | tail | 1 | 18753 | 19250 |
| YP_009017294.1 | NC_023732_p69 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 47006 | 48271 |
| YP_009017279.1 | NC_023732_p54 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 39949 | 41379 |
| YP_009017273.1 | NC_023732_p48 | hypothetical protein | phrog_9705 | unknown function | unknown function | 1 | 37886 | 38221 |
| YP_009017288.1 | NC_023732_p63 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44938 | 45108 |
| YP_009017235.1 | NC_023732_p10 | hypothetical protein | phrog_5309 | head-tail adaptor | connector | 1 | 7692 | 8030 |
| YP_009017248.1 | NC_023732_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21556 | 21942 |
| YP_009017297.1 | NC_023732_p72 | hypothetical protein | phrog_6206 | unknown function | unknown function | 1 | 49199 | 49345 |
| YP_009017271.1 | NC_023732_p46 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 36513 | 36878 |
| YP_009017238.1 | NC_023732_p13 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 9002 | 9901 |
| YP_009017334.1 | NC_023732_p109 | hypothetical protein | phrog_14714 | unknown function | unknown function | -1 | 67901 | 68065 |
| YP_009017249.1 | NC_023732_p24 | hypothetical protein | phrog_9784 | minor tail protein | tail | 1 | 21943 | 24231 |
| YP_009017254.1 | NC_023732_p29 | hypothetical protein | phrog_5963 | holin | lysis | 1 | 27553 | 28020 |
| YP_009017283.1 | NC_023732_p58 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 42511 | 42687 |
| YP_009017259.1 | NC_023732_p34 | hypothetical protein | phrog_9776 | unknown function | unknown function | -1 | 29376 | 29663 |
| YP_009017323.1 | NC_023732_p98 | hypothetical protein | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 61717 | 62124 |
| YP_009017267.1 | NC_023732_p42 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 34961 | 35173 |
| YP_009017321.1 | NC_023732_p96 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 61165 | 61335 |
| YP_009017242.1 | NC_023732_p17 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 16080 | 16994 |
| YP_009017280.1 | NC_023732_p55 | hypothetical protein | phrog_4670 | unknown function | unknown function | 1 | 41748 | 41879 |
| YP_009017247.1 | NC_023732_p22 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 21196 | 21471 |
| YP_009017329.1 | NC_023732_p104 | hypothetical protein | phrog_22726 | unknown function | unknown function | -1 | 64023 | 64295 |
| YP_009017326.1 | NC_023732_p101 | hypothetical protein | phrog_6800 | unknown function | unknown function | 1 | 62455 | 62631 |
| YP_009017290.1 | NC_023732_p65 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 45386 | 45745 |
| YP_009017228.1 | NC_023732_p3 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 866 | 1069 |
| YP_009017305.1 | NC_023732_p80 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 54237 | 54467 |
| YP_009017236.1 | NC_023732_p11 | hypothetical protein | phrog_5775 | head-tail connector protein | connector | 1 | 8030 | 8461 |
| YP_009017299.1 | NC_023732_p74 | hypothetical protein | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 50190 | 51674 |
| YP_009017250.1 | NC_023732_p25 | hypothetical protein | phrog_9833 | unknown function | unknown function | 1 | 24263 | 24412 |
| YP_009017327.1 | NC_023732_p102 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 62845 | 63534 |
| YP_009017311.1 | NC_023732_p86 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 57289 | 57972 |
| YP_009017234.1 | NC_023732_p9 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7231 | 7695 |
| YP_009017266.1 | NC_023732_p41 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34659 | 34964 |
| YP_009017264.1 | NC_023732_p39 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33227 | 34006 |
| YP_009017281.1 | NC_023732_p56 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 41872 | 42207 |
| YP_009017325.1 | NC_023732_p100 | hypothetical protein | phrog_6027 | unknown function | unknown function | 1 | 62336 | 62455 |