Genomic map of Rhodococcus phage ReqiPepy6 (NC_023735)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023735
Definition
Rhodococcus phage ReqiPepy6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pepyhexavirus.
DB of origin
REFSEQ
Length
76797
Host Name
Rhodococcus equi
Host domain
Bacteria
Is prophage?
undef
Number of proteins
107
%GC
53.41
Number of singletons
12
Number of paralogs
12

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009017669.1 NC_023735_p55 hypothetical protein phrog_2152 unknown function unknown function 1 43823 44617
YP_009017649.1 NC_023735_p35 tape measure protein phrog_4372 tail length tape measure protein tail 1 30017 35869
YP_009017625.1 NC_023735_p11 holin phrog_29195 holin lysis 1 9809 10297
YP_009017719.1 NC_023735_p105 hypothetical protein phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 72958 73512
YP_009017706.1 NC_023735_p92 hypothetical protein phrog_35556 unknown function unknown function 1 64801 65370
YP_009017686.1 NC_023735_p72 hypothetical protein phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 52377 56261
YP_009017712.1 NC_023735_p98 hypothetical protein phrog_35090 unknown function unknown function 1 67336 68703
YP_009017656.1 NC_023735_p42 hypothetical protein phrog_32238 unknown function unknown function 1 39716 39931
YP_009017678.1 NC_023735_p64 hypothetical protein phrog_4282 unknown function unknown function 1 47253 47894
YP_009017637.1 NC_023735_p23 hypothetical protein phrog_12541 unknown function unknown function 1 21319 21969
YP_009017685.1 NC_023735_p71 hypothetical protein phrog_4678 unknown function unknown function 1 51794 52342
YP_009017640.1 NC_023735_p26 hypothetical protein phrog_4270 unknown function unknown function 1 24289 24642
YP_009017659.1 NC_023735_p45 hypothetical protein phrog_28747 unknown function unknown function 1 40522 40794
YP_009017616.1 NC_023735_p2 tail fiber protein phrog_11419 tail fiber protein tail 1 1788 3533
YP_009017714.1 NC_023735_p100 hypothetical protein singleton unknown function unknown function 1 69759 69962
YP_009017652.1 NC_023735_p38 hypothetical protein phrog_24913 unknown function unknown function 1 38078 38704
YP_009017694.1 NC_023735_p80 hypothetical protein phrog_7996 unknown function unknown function 1 59910 60173
YP_009017701.1 NC_023735_p87 hypothetical protein phrog_19093 unknown function unknown function 1 62397 63032
YP_009017703.1 NC_023735_p89 hypothetical protein phrog_37300 unknown function unknown function 1 63518 63757
YP_009017664.1 NC_023735_p50 hypothetical protein phrog_29055 unknown function unknown function 1 42585 42692
YP_009017644.1 NC_023735_p30 head protein phrog_2645 major tail protein tail 1 26415 27218
YP_009017651.1 NC_023735_p37 hypothetical protein phrog_538 minor tail protein tail 1 36697 38091
YP_009017684.1 NC_023735_p70 hypothetical protein phrog_4695 unknown function unknown function 1 50892 51794
YP_009017683.1 NC_023735_p69 hypothetical protein phrog_2152 unknown function unknown function 1 50002 50880
YP_009017692.1 NC_023735_p78 hypothetical protein phrog_33255 unknown function unknown function 1 59236 59577
YP_009017681.1 NC_023735_p67 hypothetical protein phrog_4079 unknown function unknown function 1 49130 49810
YP_009017655.1 NC_023735_p41 hypothetical protein singleton unknown function unknown function 1 39445 39636
YP_009017699.1 NC_023735_p85 hypothetical protein phrog_7996 unknown function unknown function 1 61811 62095
YP_009017716.1 NC_023735_p102 hypothetical protein phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 70167 71795
YP_009017676.1 NC_023735_p62 hypothetical protein phrog_27587 unknown function unknown function 1 46382 46618
YP_009017671.1 NC_023735_p57 hypothetical protein phrog_29121 unknown function unknown function 1 44885 45085
YP_009017691.1 NC_023735_p77 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 58658 59239
YP_009017636.1 NC_023735_p22 portal protein phrog_12 portal protein head and packaging 1 19977 21317
YP_009017665.1 NC_023735_p51 hypothetical protein singleton unknown function unknown function 1 42789 43004
YP_009017688.1 NC_023735_p74 hypothetical protein phrog_19221 unknown function unknown function 1 56754 57488
YP_009017673.1 NC_023735_p59 hypothetical protein singleton unknown function unknown function 1 45311 45661
YP_009017667.1 NC_023735_p53 hypothetical protein phrog_32807 unknown function unknown function 1 43258 43539
YP_009017717.1 NC_023735_p103 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 72091 72582
YP_009017720.1 NC_023735_p106 hypothetical protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 73543 76257
YP_009017618.1 NC_023735_p4 tail fiber protein phrog_24580 tail fiber protein tail 1 4449 5327
YP_009017617.1 NC_023735_p3 hypothetical protein phrog_18370 unknown function unknown function 1 3530 4390
YP_009017622.1 NC_023735_p8 hypothetical protein phrog_4259 unknown function unknown function 1 8195 8551
YP_009017704.1 NC_023735_p90 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 63754 64467
YP_009017697.1 NC_023735_p83 hypothetical protein phrog_7996 unknown function unknown function 1 61257 61511
YP_009017690.1 NC_023735_p76 hypothetical protein singleton unknown function unknown function 1 58513 58656
YP_009017675.1 NC_023735_p61 hypothetical protein phrog_34332 unknown function unknown function 1 46067 46297
YP_009017648.1 NC_023735_p34 structural protein phrog_5 tail completion or Neck1 protein connector 1 29640 30020
YP_009017630.1 NC_023735_p16 hypothetical protein phrog_38171 unknown function unknown function 1 14589 15254
YP_009017696.1 NC_023735_p82 hypothetical protein phrog_7996 unknown function unknown function 1 60481 61254
YP_009017679.1 NC_023735_p65 hypothetical protein phrog_27818 unknown function unknown function 1 48054 48440
YP_009017672.1 NC_023735_p58 hypothetical protein phrog_32424 unknown function unknown function 1 45078 45311
YP_009017702.1 NC_023735_p88 hypothetical protein phrog_19093 unknown function unknown function 1 63039 63521
YP_009017628.1 NC_023735_p14 TerL phrog_9 terminase large subunit head and packaging 1 12293 14038
YP_009017677.1 NC_023735_p63 hypothetical protein phrog_6802 unknown function unknown function 1 46716 47210
YP_009017687.1 NC_023735_p73 hypothetical protein phrog_19221 unknown function unknown function 1 56269 56649
YP_009017645.1 NC_023735_p31 hypothetical protein phrog_22009 unknown function unknown function 1 27232 27735
YP_009017668.1 NC_023735_p54 hypothetical protein phrog_30341 unknown function unknown function 1 43558 43782
YP_009017707.1 NC_023735_p93 hypothetical protein phrog_37238 unknown function unknown function 1 65370 65612
YP_009017641.1 NC_023735_p27 structural protein phrog_78 tail terminator connector 1 24605 24907
YP_009017662.1 NC_023735_p48 hypothetical protein phrog_32469 unknown function unknown function 1 41936 42214
YP_009017657.1 NC_023735_p43 hypothetical protein phrog_12653 unknown function unknown function 1 39982 40149
YP_009017626.1 NC_023735_p12 structural protein phrog_4247 virion structural protein head and packaging 1 10337 10684
YP_009017660.1 NC_023735_p46 hypothetical protein singleton unknown function unknown function 1 40891 41121
YP_009017711.1 NC_023735_p97 hypothetical protein phrog_31149 unknown function unknown function 1 66744 67298
YP_009017682.1 NC_023735_p68 hypothetical protein phrog_6038 unknown function unknown function 1 49847 49990
YP_009017620.1 NC_023735_p6 hypothetical protein phrog_33609 unknown function unknown function 1 7019 7321
YP_009017674.1 NC_023735_p60 hypothetical protein phrog_38041 unknown function unknown function 1 45654 46070
YP_009017646.1 NC_023735_p32 hypothetical protein phrog_23770 unknown function unknown function 1 27732 28799
YP_009017700.1 NC_023735_p86 hypothetical protein phrog_7996 unknown function unknown function 1 62108 62392
YP_009017666.1 NC_023735_p52 hypothetical protein phrog_28025 unknown function unknown function 1 43050 43229
YP_009017721.1 NC_023735_p107 hypothetical protein phrog_4303 unknown function unknown function 1 76267 76509
YP_009017713.1 NC_023735_p99 hypothetical protein phrog_35414 unknown function unknown function 1 68748 69698
YP_009017698.1 NC_023735_p84 hypothetical protein phrog_7996 unknown function unknown function 1 61518 61811
YP_009017624.1 NC_023735_p10 LysA phrog_880 endolysin lysis 1 9009 9806
YP_009017639.1 NC_023735_p25 prohead protease phrog_3270 head maturation protease head and packaging 1 22127 24277
YP_009017638.1 NC_023735_p24 hypothetical protein singleton unknown function unknown function 1 21981 22097
YP_009017670.1 NC_023735_p56 hypothetical protein phrog_25998 unknown function unknown function 1 44650 44892
YP_009017653.1 NC_023735_p39 hypothetical protein phrog_33583 unknown function unknown function 1 38550 38891
YP_009017709.1 NC_023735_p95 hypothetical protein singleton unknown function unknown function 1 65867 66109
YP_009017642.1 NC_023735_p28 head protein phrog_2645 major tail protein tail 1 24923 25810
YP_009017631.1 NC_023735_p17 hypothetical protein phrog_7502 unknown function unknown function 1 15271 16104
YP_009017658.1 NC_023735_p44 hypothetical protein singleton unknown function unknown function 1 40228 40404
YP_009017629.1 NC_023735_p15 hypothetical protein phrog_14126 unknown function unknown function 1 14185 14574
YP_009017647.1 NC_023735_p33 LysB phrog_102 endolysin lysis 1 28827 29618
YP_009017661.1 NC_023735_p47 hypothetical protein phrog_29246 unknown function unknown function 1 41599 41850
YP_009017621.1 NC_023735_p7 tail fiber protein phrog_38417 hyaluronidase other 1 7338 8183
YP_009017643.1 NC_023735_p29 hypothetical protein phrog_4338 unknown function unknown function 1 25842 26396
YP_009017708.1 NC_023735_p94 hypothetical protein phrog_29296 unknown function unknown function 1 65727 65858
YP_009017650.1 NC_023735_p36 hypothetical protein phrog_33 distal tail protein Dit tail 1 35866 36693
YP_009017615.1 NC_023735_p1 tail fiber protein phrog_33904 tail fiber protein tail 1 115 1743
YP_009017633.1 NC_023735_p19 structural protein phrog_35934 virion structural protein head and packaging 1 17204 18199
YP_009017680.1 NC_023735_p66 hypothetical protein phrog_7539 unknown function unknown function 1 48806 49051
YP_009017632.1 NC_023735_p18 hypothetical protein phrog_7502 unknown function unknown function 1 16104 17147
YP_009017663.1 NC_023735_p49 hypothetical protein phrog_26966 unknown function unknown function 1 42303 42539
YP_009017623.1 NC_023735_p9 hypothetical protein phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 8541 8951
YP_009017619.1 NC_023735_p5 tail fiber protein singleton unknown function unknown function 1 5343 6959
YP_009017705.1 NC_023735_p91 hypothetical protein phrog_32271 unknown function unknown function 1 64479 64694
YP_009017695.1 NC_023735_p81 hypothetical protein phrog_32781 unknown function unknown function 1 60275 60484
YP_009017635.1 NC_023735_p21 hypothetical protein phrog_6291 unknown function unknown function 1 19396 19935
YP_009017715.1 NC_023735_p101 hypothetical protein singleton unknown function unknown function 1 69959 70153
YP_009017710.1 NC_023735_p96 hypothetical protein singleton unknown function unknown function 1 66268 66741
YP_009017689.1 NC_023735_p75 hypothetical protein phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 57614 58513
YP_009017627.1 NC_023735_p13 hypothetical protein phrog_24711 unknown function unknown function 1 10681 12276
YP_009017634.1 NC_023735_p20 hypothetical protein phrog_7502 unknown function unknown function 1 18201 19283
YP_009017718.1 NC_023735_p104 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 72684 73013
YP_009017654.1 NC_023735_p40 hypothetical protein phrog_5818 unknown function unknown function 1 38884 39249
YP_009017693.1 NC_023735_p79 hypothetical protein phrog_7996 unknown function unknown function 1 59597 59881