Genomic map of Ralstonia phage RSB2 (NC_023736)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023736
Definition
Ralstonia phage RSB2 DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Kelmasvirus; Ralstonia virus RSB2.
DB of origin
REFSEQ
Length
40411
Host Name
Ralstonia solanacearum
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
61.75
Number of singletons
18
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009017764.1 NC_023736_p43 internal virion protein B phrog_805 internal virion protein head and packaging 1 28150 28722
YP_009017728.1 NC_023736_p7 hypothetical protein singleton unknown function unknown function 1 2993 3307
YP_009017755.1 NC_023736_p34 hypothetical protein singleton unknown function unknown function 1 19815 20174
YP_009017743.1 NC_023736_p22 hypothetical protein phrog_30269 unknown function unknown function 1 10785 11075
YP_009017740.1 NC_023736_p19 hypothetical protein phrog_31516 unknown function unknown function 1 9753 10220
YP_009017736.1 NC_023736_p15 hypothetical protein singleton unknown function unknown function 1 5636 5737
YP_009017770.1 NC_023736_p49 packaging maturation protein A phrog_1351 terminase small subunit head and packaging 1 37559 37840
YP_009017769.1 NC_023736_p48 lysis protein phrog_920 holin lysis 1 37359 37559
YP_009017722.1 NC_023736_p1 hypothetical protein phrog_30187 unknown function unknown function 1 950 1162
YP_009017745.1 NC_023736_p24 hypothetical protein singleton unknown function unknown function 1 11769 11909
YP_009017761.1 NC_023736_p40 tail tubular protein A phrog_446 tail protein tail 1 24634 25212
YP_009017766.1 NC_023736_p45 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 30939 34811
YP_009017757.1 NC_023736_p36 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 20555 20869
YP_009017725.1 NC_023736_p4 hypothetical protein singleton unknown function unknown function 1 2334 2576
YP_009017751.1 NC_023736_p30 DNA polymerase-like protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 16127 18232
YP_009017773.1 NC_023736_p52 hypothetical protein singleton unknown function unknown function 1 39865 40017
YP_009017746.1 NC_023736_p25 ssDNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 11984 12673
YP_009017772.1 NC_023736_p51 hypothetical protein singleton unknown function unknown function 1 39758 39877
YP_009017723.1 NC_023736_p2 hypothetical protein singleton unknown function unknown function 1 1692 1850
YP_009017763.1 NC_023736_p42 internal virion protein A phrog_308 internal virion protein head and packaging 1 27711 28157
YP_009017737.1 NC_023736_p16 hypothetical protein singleton unknown function unknown function 1 5737 5961
YP_009017756.1 NC_023736_p35 hypothetical protein phrog_3986 unknown function unknown function 1 20119 20553
YP_009017730.1 NC_023736_p9 hypothetical protein phrog_37607 unknown function unknown function 1 3661 3846
YP_009017762.1 NC_023736_p41 tail tubular protein B phrog_457 tail protein tail 1 25227 27593
YP_009017729.1 NC_023736_p8 hypothetical protein singleton unknown function unknown function 1 3297 3674
YP_009017768.1 NC_023736_p47 hypothetical protein singleton unknown function unknown function 1 37101 37280
YP_009017748.1 NC_023736_p27 lysozyme-like protein phrog_822 amidase lysis 1 13145 13615
YP_009017754.1 NC_023736_p33 exonuclease-like protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 18931 19794
YP_009017724.1 NC_023736_p3 hypothetical protein phrog_2226 SAM-dependent methyltransferase other 1 1861 2274
YP_009017758.1 NC_023736_p37 head to tail joining protein phrog_449 head-tail adaptor connector 1 20874 22469
YP_009017731.1 NC_023736_p10 hypothetical protein singleton unknown function unknown function 1 3859 4089
YP_009017733.1 NC_023736_p12 hypothetical protein phrog_35025 unknown function unknown function 1 4335 4664
YP_009017738.1 NC_023736_p17 DNA ligase-like protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 5954 6883
YP_009017727.1 NC_023736_p6 hypothetical protein singleton unknown function unknown function 1 2841 2996
YP_009017753.1 NC_023736_p32 hypothetical protein phrog_1334 unknown function unknown function 1 18707 18907
YP_009017726.1 NC_023736_p5 hypothetical protein singleton unknown function unknown function 1 2644 2820
YP_009017739.1 NC_023736_p18 RNA polymerase-like protein phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 7145 9736
YP_009017734.1 NC_023736_p13 hypothetical protein singleton unknown function unknown function 1 4721 5245
YP_009017744.1 NC_023736_p23 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 11072 11749
YP_009017752.1 NC_023736_p31 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 18269 18691
YP_009017749.1 NC_023736_p28 hypothetical protein phrog_13935 unknown function unknown function 1 13637 14233
YP_009017741.1 NC_023736_p20 hypothetical protein singleton unknown function unknown function 1 10259 10435
YP_009017771.1 NC_023736_p50 packaging maturation protein B phrog_38 terminase large subunit head and packaging 1 37862 39643
YP_009017732.1 NC_023736_p11 hypothetical protein phrog_6379 unknown function unknown function 1 4056 4322
YP_009017759.1 NC_023736_p38 capsid assembly protein phrog_1052 head assembly head and packaging 1 22546 23355
YP_009017747.1 NC_023736_p26 endonuclease-like protein phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 12675 13142
YP_009017765.1 NC_023736_p44 internal virion protein C phrog_1339 internal virion protein head and packaging 1 28732 30918
YP_009017767.1 NC_023736_p46 tail fiber protein phrog_4492 tail fiber protein tail 1 34879 36972
YP_009017742.1 NC_023736_p21 hypothetical protein singleton unknown function unknown function 1 10432 10725
YP_009017735.1 NC_023736_p14 hypothetical protein singleton unknown function unknown function 1 5245 5634
YP_009017750.1 NC_023736_p29 DNA primase/helicase-like protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 14315 16003
YP_009017760.1 NC_023736_p39 major capsid protein phrog_267 major head protein head and packaging 1 23426 24382