Genomic map of Mycobacterium virus Billknuckles (NC_023739)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023739
Definition
Mycobacterium phage BillKnuckles, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus.
DB of origin
REFSEQ
Length
51821
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
86
%GC
63.43
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009018229.1 NC_023739_p2 HNH domain phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 748 1044
YP_009018246.1 NC_023739_p19 hypothetical protein phrog_320 head closure Hc1 connector 1 14046 14426
YP_009018266.1 NC_023739_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31890 32162
YP_009018259.1 NC_023739_p32 hypothetical protein phrog_346 minor tail protein tail 1 24816 26669
YP_009018311.1 NC_023739_p84 hypothetical protein phrog_15443 unknown function unknown function -1 50605 50889
YP_009018233.1 NC_023739_p6 hypothetical protein phrog_553 minor tail protein tail 1 3460 4170
YP_009018245.1 NC_023739_p18 hypothetical protein phrog_2348 unknown function unknown function 1 13921 14049
YP_009018250.1 NC_023739_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16253 17052
YP_009018251.1 NC_023739_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16253 16630
YP_009018257.1 NC_023739_p30 hypothetical protein phrog_981 minor tail protein tail 1 24115 24447
YP_009018278.1 NC_023739_p51 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37484 37624
YP_009018242.1 NC_023739_p15 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 11758 12255
YP_009018287.1 NC_023739_p60 DnaB helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42432 43253
YP_009018254.1 NC_023739_p27 hypothetical protein phrog_1543 minor tail protein tail 1 21635 21817
YP_009018277.1 NC_023739_p50 hypothetical protein phrog_354 sigma-K factor transcription regulation -1 36700 37476
YP_009018234.1 NC_023739_p7 hypothetical protein phrog_1718 tail protein tail 1 4184 4444
YP_009018240.1 NC_023739_p13 portal phrog_104 portal protein head and packaging 1 9350 10816
YP_009018237.1 NC_023739_p10 LysA phrog_317 endolysin lysis 1 5290 6684
YP_009018305.1 NC_023739_p78 hypothetical protein phrog_2985 unknown function unknown function -1 48981 49136
YP_009018285.1 NC_023739_p58 hypothetical protein singleton unknown function unknown function -1 41839 42021
YP_009018228.1 NC_023739_p1 hypothetical protein phrog_4649 unknown function unknown function 1 599 751
YP_009018230.1 NC_023739_p3 tail fiber phrog_226 minor tail protein tail 1 1080 1520
YP_009018238.1 NC_023739_p11 LysB phrog_102 endolysin lysis 1 6674 7642
YP_009018299.1 NC_023739_p72 hypothetical protein phrog_1387 unknown function unknown function -1 47074 47277
YP_009018253.1 NC_023739_p26 minor tail phrog_106 minor tail protein tail 1 19559 21616
YP_009018241.1 NC_023739_p14 head assembly protease phrog_193 head maturation protease head and packaging 1 10813 11697
YP_009018252.1 NC_023739_p25 tapemeasure phrog_305 tail length tape measure protein tail 1 17064 19535
YP_009018289.1 NC_023739_p62 hypothetical protein phrog_1705 unknown function unknown function -1 43423 43545
YP_009018273.1 NC_023739_p46 hypothetical protein phrog_1781 unknown function unknown function -1 35406 35636
YP_009018269.1 NC_023739_p42 hypothetical protein phrog_1971 unknown function unknown function -1 32418 32660
YP_009018296.1 NC_023739_p69 repressor phrog_357 transcriptional repressor transcription regulation -1 45738 46250
YP_009018284.1 NC_023739_p57 endoVII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 41361 41852
YP_009018235.1 NC_023739_p8 hypothetical protein phrog_747 unknown function unknown function 1 4452 4709
YP_009018283.1 NC_023739_p56 hypothetical protein phrog_397 unknown function unknown function -1 41107 41364
YP_009018248.1 NC_023739_p21 hypothetical protein phrog_123 tail terminator connector 1 14825 15271
YP_009018300.1 NC_023739_p73 hypothetical protein phrog_1155 unknown function unknown function -1 47274 47462
YP_009018302.1 NC_023739_p75 hypothetical protein phrog_2093 unknown function unknown function -1 47626 47754
YP_009018271.1 NC_023739_p44 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 33039 33515
YP_009018310.1 NC_023739_p83 hypothetical protein phrog_5130 unknown function unknown function -1 50384 50572
YP_009018290.1 NC_023739_p63 hypothetical protein phrog_520 unknown function unknown function -1 43542 43835
YP_009018244.1 NC_023739_p17 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 13547 13924
YP_009018281.1 NC_023739_p54 DNA primase/intein phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39158 40699
YP_009018293.1 NC_023739_p66 hypothetical protein phrog_1311 unknown function unknown function -1 44859 44999
YP_009018231.1 NC_023739_p4 hypothetical protein phrog_2830 unknown function unknown function 1 1808 2119
YP_009018288.1 NC_023739_p61 hypothetical protein phrog_2507 unknown function unknown function -1 43253 43426
YP_009018272.1 NC_023739_p45 DNA pol I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33540 35369
YP_009018255.1 NC_023739_p28 minor tail phrog_110 minor tail protein tail 1 21817 23619
YP_009018243.1 NC_023739_p16 capsid phrog_10 major head protein head and packaging 1 12288 13481
YP_009018308.1 NC_023739_p81 hypothetical protein phrog_5419 unknown function unknown function -1 49788 50042
YP_009018303.1 NC_023739_p76 hypothetical protein phrog_932 unknown function unknown function -1 47775 47924
YP_009018282.1 NC_023739_p55 hypothetical protein phrog_1783 unknown function unknown function -1 40952 41110
YP_009018313.1 NC_023739_p86 hypothetical protein phrog_828 unknown function unknown function -1 51279 51482
YP_009018264.1 NC_023739_p37 hypothetical protein phrog_411 unknown function unknown function 1 29831 30115
YP_009018279.1 NC_023739_p52 RDF phrog_221 metallo-phosphoesterase other -1 37624 38391
YP_009018267.1 NC_023739_p40 hypothetical protein phrog_2035 unknown function unknown function -1 32159 32329
YP_009018258.1 NC_023739_p31 hypothetical protein phrog_1397 unknown function unknown function 1 24444 24791
YP_009018291.1 NC_023739_p64 hypothetical protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 43839 44021
YP_009018265.1 NC_023739_p38 serine integrase phrog_95 integrase integration and excision 1 30267 31769
YP_009018292.1 NC_023739_p65 RecB phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 44048 44866
YP_009018286.1 NC_023739_p59 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 42130 42435
YP_009018280.1 NC_023739_p53 hypothetical protein phrog_1167 phosphofructokinase other -1 38388 39161
YP_009018298.1 NC_023739_p71 hypothetical protein phrog_1720 unknown function unknown function -1 46808 47077
YP_009018294.1 NC_023739_p67 hypothetical protein phrog_658 unknown function unknown function -1 44996 45304
YP_009018249.1 NC_023739_p22 major tail protein phrog_117 major tail protein tail 1 15280 16131
YP_009018232.1 NC_023739_p5 hypothetical protein phrog_1197 tail protein tail 1 2380 3450
YP_009018270.1 NC_023739_p43 hypothetical protein phrog_383 unknown function unknown function -1 32657 33016
YP_009018312.1 NC_023739_p85 hypothetical protein phrog_10520 unknown function unknown function -1 50886 51113
YP_009018295.1 NC_023739_p68 repressor phrog_1809 unknown function unknown function -1 45301 45696
YP_009018261.1 NC_023739_p34 hypothetical protein phrog_644 unknown function unknown function 1 28230 28553
YP_009018236.1 NC_023739_p9 HNH domain phrog_1492 HNH endonuclease DNA, RNA and nucleotide metabolism 1 4709 5290
YP_009018239.1 NC_023739_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7662 9350
YP_009018256.1 NC_023739_p29 hypothetical protein phrog_352 minor tail protein tail 1 23657 24103
YP_009018304.1 NC_023739_p77 DNA methylase phrog_363 DNA methyltransferase other -1 48223 48897
YP_009018262.1 NC_023739_p35 hypothetical protein phrog_1560 unknown function unknown function 1 28563 28754
YP_009018309.1 NC_023739_p82 hypothetical protein phrog_5970 unknown function unknown function -1 50142 50387
YP_009018268.1 NC_023739_p41 hypothetical protein phrog_1860 unknown function unknown function -1 32326 32421
YP_009018247.1 NC_023739_p20 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14426 14821
YP_009018297.1 NC_023739_p70 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 46512 46811
YP_009018307.1 NC_023739_p80 hypothetical protein phrog_2212 unknown function unknown function -1 49612 49695
YP_009018275.1 NC_023739_p48 hypothetical protein phrog_2094 unknown function unknown function -1 36188 36520
YP_009018276.1 NC_023739_p49 hypothetical protein phrog_499 unknown function unknown function -1 36521 36703
YP_009018263.1 NC_023739_p36 hypothetical protein phrog_754 minor tail protein tail 1 28751 29710
YP_009018274.1 NC_023739_p47 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35667 36158
YP_009018301.1 NC_023739_p74 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 47462 47629
YP_009018260.1 NC_023739_p33 tail phrog_382 minor tail protein with lysin activity tail 1 26662 28140
YP_009018306.1 NC_023739_p79 hypothetical protein phrog_10288 unknown function unknown function -1 49344 49583