Genomic map of Mycobacterium phage Akoma (NC_023742)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_023742
Definition
Mycobacterium phage Akoma, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Pipefishvirus.
DB of origin
REFSEQ
Length
68711
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
67.54
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_009018583.1 NC_023742_p73 hypothetical protein phrog_4885 unknown function unknown function 1 58934 59191
YP_009018562.1 NC_023742_p52 type III restriction helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 45461 47260
YP_009018605.1 NC_023742_p95 hypothetical protein phrog_6114 unknown function unknown function -1 64584 64763
YP_009018527.1 NC_023742_p17 hypothetical protein phrog_565 holin lysis 1 14566 15000
YP_009018557.1 NC_023742_p47 LysB phrog_102 endolysin lysis 1 41537 42601
YP_009018548.1 NC_023742_p38 hypothetical protein phrog_3329 unknown function unknown function 1 35526 36875
YP_009018587.1 NC_023742_p77 hypothetical protein phrog_928 unknown function unknown function 1 59885 60412
YP_009018594.1 NC_023742_p84 hypothetical protein phrog_6338 unknown function unknown function -1 61691 61849
YP_009018539.1 NC_023742_p29 hypothetical protein phrog_838 unknown function unknown function 1 26147 27577
YP_009018595.1 NC_023742_p85 hypothetical protein phrog_4392 unknown function unknown function -1 61842 62195
YP_009018578.1 NC_023742_p68 hypothetical protein phrog_1016 unknown function unknown function 1 57286 57534
YP_009018596.1 NC_023742_p86 hypothetical protein phrog_7541 unknown function unknown function -1 62195 62527
YP_009018517.1 NC_023742_p7 hypothetical protein phrog_6317 unknown function unknown function -1 4615 4866
YP_009018602.1 NC_023742_p92 hypothetical protein phrog_6428 unknown function unknown function -1 63954 64166
YP_009018546.1 NC_023742_p36 hypothetical protein phrog_282 unknown function unknown function 1 34280 34933
YP_009018540.1 NC_023742_p30 hypothetical protein phrog_837 minor tail protein tail 1 27574 28617
YP_009018554.1 NC_023742_p44 hypothetical protein phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39028 39465
YP_009018529.1 NC_023742_p19 hypothetical protein phrog_2344 unknown function unknown function 1 15461 15940
YP_009018601.1 NC_023742_p91 hypothetical protein phrog_6199 unknown function unknown function -1 63530 63889
YP_009018573.1 NC_023742_p63 hypothetical protein phrog_6735 unknown function unknown function -1 55010 55129
YP_009018521.1 NC_023742_p11 hypothetical protein phrog_776 portal protein head and packaging 1 6314 8218
YP_009018566.1 NC_023742_p56 RepA phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 48461 51064
YP_009018551.1 NC_023742_p41 hypothetical protein phrog_892 tail fiber protein tail 1 37604 38014
YP_009018609.1 NC_023742_p99 hypothetical protein phrog_2972 unknown function unknown function -1 67073 67309
YP_009018547.1 NC_023742_p37 hypothetical protein phrog_282 unknown function unknown function 1 34930 35529
YP_009018600.1 NC_023742_p90 hypothetical protein phrog_5355 unknown function unknown function -1 63299 63454
YP_009018519.1 NC_023742_p9 hypothetical protein phrog_6276 unknown function unknown function -1 5548 5844
YP_009018598.1 NC_023742_p88 hypothetical protein phrog_7490 unknown function unknown function -1 62808 62996
YP_009018571.1 NC_023742_p61 hypothetical protein phrog_3025 unknown function unknown function -1 54091 54537
YP_009018608.1 NC_023742_p98 hypothetical protein phrog_1221 unknown function unknown function -1 65887 66999
YP_009018590.1 NC_023742_p80 HNH domain phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 60946 61275
YP_009018550.1 NC_023742_p40 hypothetical protein phrog_941 unknown function unknown function 1 37350 37586
YP_009018560.1 NC_023742_p50 hypothetical protein phrog_7519 unknown function unknown function -1 44878 45099
YP_009018607.1 NC_023742_p97 hypothetical protein phrog_1010 unknown function unknown function -1 65325 65813
YP_009018534.1 NC_023742_p24 hypothetical protein phrog_810 unknown function unknown function 1 18474 18995
YP_009018572.1 NC_023742_p62 hypothetical protein phrog_993 unknown function unknown function -1 54534 55010
YP_009018591.1 NC_023742_p81 hypothetical protein phrog_4461 unknown function unknown function -1 61262 61366
YP_009018593.1 NC_023742_p83 hypothetical protein phrog_6460 unknown function unknown function -1 61524 61694
YP_009018537.1 NC_023742_p27 tail assembly chaperone phrog_1118 tail assembly chaperone tail 1 19777 20370
YP_009018522.1 NC_023742_p12 portal phrog_859 portal protein head and packaging 1 8208 10640
YP_009018588.1 NC_023742_p78 hypothetical protein phrog_4974 unknown function unknown function -1 60425 60613
YP_009018575.1 NC_023742_p65 hypothetical protein phrog_6105 unknown function unknown function -1 55393 55743
YP_009018563.1 NC_023742_p53 hypothetical protein phrog_6400 unknown function unknown function -1 47257 47619
YP_009018535.1 NC_023742_p25 hypothetical protein phrog_901 unknown function unknown function 1 19006 19380
YP_009018544.1 NC_023742_p34 hypothetical protein phrog_240 head protein head and packaging 1 33452 33835
YP_009018518.1 NC_023742_p8 RuvC phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism -1 4863 5414
YP_009018603.1 NC_023742_p93 hypothetical protein phrog_5411 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64166 64546
YP_009018555.1 NC_023742_p45 hypothetical protein phrog_636 unknown function unknown function -1 39510 40208
YP_009018604.1 NC_023742_p94 hypothetical protein singleton unknown function unknown function -1 64546 64587
YP_009018581.1 NC_023742_p71 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 57919 58518
YP_009018589.1 NC_023742_p79 hypothetical protein phrog_6691 unknown function unknown function -1 60668 60949
YP_009018549.1 NC_023742_p39 hypothetical protein phrog_915 unknown function unknown function 1 36898 37266
YP_009018515.1 NC_023742_p5 ParB phrog_2159 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 2148 2717
YP_009018523.1 NC_023742_p13 hypothetical protein phrog_2069 unknown function unknown function 1 10640 10846
YP_009018585.1 NC_023742_p75 hypothetical protein phrog_6511 unknown function unknown function 1 59393 59545
YP_009018552.1 NC_023742_p42 hypothetical protein phrog_2804 virion structural protein head and packaging 1 38014 38739
YP_009018532.1 NC_023742_p22 hypothetical protein phrog_6514 unknown function unknown function -1 17496 17606
YP_009018559.1 NC_023742_p49 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43265 44878
YP_009018561.1 NC_023742_p51 hypothetical protein phrog_780 unknown function unknown function -1 45146 45415
YP_009018579.1 NC_023742_p69 hypothetical protein phrog_6404 unknown function unknown function 1 57531 57761
YP_009018553.1 NC_023742_p43 hypothetical protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 38795 39031
YP_009018614.1 NC_023742_p104 hypothetical protein phrog_5930 unknown function unknown function 1 68360 68662
YP_009018520.1 NC_023742_p10 hypothetical protein phrog_781 unknown function unknown function 1 5949 6284
YP_009018558.1 NC_023742_p48 hypothetical protein phrog_870 unknown function unknown function -1 42671 43216
YP_009018543.1 NC_023742_p33 hypothetical protein phrog_416 minor tail protein tail 1 32223 33425
YP_009018512.1 NC_023742_p2 hypothetical protein phrog_6919 unknown function unknown function 1 690 854
YP_009018606.1 NC_023742_p96 hypothetical protein phrog_6469 unknown function unknown function -1 64760 65227
YP_009018580.1 NC_023742_p70 hypothetical protein phrog_4938 unknown function unknown function 1 57758 57922
YP_009018599.1 NC_023742_p89 hypothetical protein phrog_2089 unknown function unknown function -1 63090 63284
YP_009018516.1 NC_023742_p6 terminase large subunit phrog_38 terminase large subunit head and packaging 1 2696 4474
YP_009018536.1 NC_023742_p26 tail assembly chaperone phrog_5 tail completion or Neck1 protein connector 1 19364 19777
YP_009018513.1 NC_023742_p3 hypothetical protein phrog_6307 unknown function unknown function 1 851 1072
YP_009018545.1 NC_023742_p35 hypothetical protein phrog_948 unknown function unknown function 1 33844 34269
YP_009018577.1 NC_023742_p67 hypothetical protein phrog_996 unknown function unknown function 1 56483 57250
YP_009018538.1 NC_023742_p28 tapemeasure protein phrog_934 tail length tape measure protein tail 1 20396 26137
YP_009018528.1 NC_023742_p18 hypothetical protein phrog_2272 unknown function unknown function 1 15003 15464
YP_009018565.1 NC_023742_p55 hypothetical protein phrog_1371 unknown function unknown function -1 47945 48418
YP_009018556.1 NC_023742_p46 LysA phrog_700 endolysin lysis 1 40271 41536
YP_009018569.1 NC_023742_p59 hypothetical protein phrog_6482 unknown function unknown function -1 53685 53960
YP_009018592.1 NC_023742_p82 hypothetical protein phrog_6304 unknown function unknown function -1 61363 61527
YP_009018533.1 NC_023742_p23 hypothetical protein phrog_783 head-tail adaptor connector 1 17737 18477
YP_009018514.1 NC_023742_p4 QueC phrog_2302 phosphoadenosine phosphosulfate reductase moron, auxiliary metabolic gene and host takeover 1 1069 2151
YP_009018611.1 NC_023742_p101 hypothetical protein phrog_5733 unknown function unknown function 1 67671 67916
YP_009018582.1 NC_023742_p72 hypothetical protein phrog_1031 unknown function unknown function 1 58523 58927
YP_009018541.1 NC_023742_p31 hypothetical protein phrog_746 minor tail protein tail 1 28614 30842
YP_009018584.1 NC_023742_p74 hypothetical protein phrog_1306 unknown function unknown function -1 59204 59338
YP_009018612.1 NC_023742_p102 hypothetical protein phrog_6097 unknown function unknown function 1 67913 68149
YP_009018526.1 NC_023742_p16 hypothetical protein phrog_970 unknown function unknown function 1 13964 14569
YP_009018574.1 NC_023742_p64 hypothetical protein phrog_6656 unknown function unknown function -1 55166 55396
YP_009018530.1 NC_023742_p20 hypothetical protein phrog_2525 unknown function unknown function 1 15937 16269
YP_009018525.1 NC_023742_p15 hypothetical protein phrog_779 unknown function unknown function 1 13140 13949
YP_009018568.1 NC_023742_p58 DNA pol I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 51868 53685
YP_009018524.1 NC_023742_p14 capsid phrog_777 major head protein head and packaging 1 11026 13041
YP_009018567.1 NC_023742_p57 hypothetical protein phrog_6342 unknown function unknown function -1 51098 51871
YP_009018597.1 NC_023742_p87 hypothetical protein phrog_7414 unknown function unknown function -1 62524 62811
YP_009018576.1 NC_023742_p66 hypothetical protein phrog_982 unknown function unknown function -1 55820 56089
YP_009018570.1 NC_023742_p60 hypothetical protein phrog_6936 unknown function unknown function -1 53957 54094
YP_009018586.1 NC_023742_p76 hypothetical protein phrog_6229 unknown function unknown function 1 59556 59903
YP_009018542.1 NC_023742_p32 hypothetical protein phrog_356 minor tail protein tail 1 30844 32226
YP_009018564.1 NC_023742_p54 hypothetical protein phrog_3892 unknown function unknown function -1 47619 47948
YP_009018613.1 NC_023742_p103 hypothetical protein phrog_6432 unknown function unknown function 1 68140 68295
YP_009018511.1 NC_023742_p1 ParB phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 693
YP_009018610.1 NC_023742_p100 hypothetical protein phrog_4825 unknown function unknown function 1 67487 67660
YP_009018531.1 NC_023742_p21 major tail subunit phrog_792 major tail protein tail 1 16357 17436