| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023744 |
Definition |
Mycobacterium phage DS6A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
60588 |
Host Name |
Mycobacterium tuberculosis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
68.43 |
Number of singletons |
35 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009018785.1 | NC_023744_p97 | HNH | singleton | unknown function | unknown function | 1 | 60043 | 60486 |
| YP_009018783.1 | NC_023744_p95 | hypothetical protein | phrog_2287 | unknown function | unknown function | 1 | 59160 | 59372 |
| YP_009018706.1 | NC_023744_p18 | tail assembly chaperone | singleton | unknown function | unknown function | 1 | 11578 | 11886 |
| YP_009018733.1 | NC_023744_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33665 | 33946 |
| YP_009018717.1 | NC_023744_p29 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 25034 | 25297 |
| YP_009018774.1 | NC_023744_p86 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 55827 | 56213 |
| YP_009018739.1 | NC_023744_p51 | hypothetical protein | phrog_16880 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36540 | 36971 |
| YP_009018770.1 | NC_023744_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52171 | 52845 |
| YP_009018707.1 | NC_023744_p19 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 12375 | 16001 |
| YP_009018768.1 | NC_023744_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51642 | 51794 |
| YP_009018715.1 | NC_023744_p27 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 22707 | 24575 |
| YP_009018740.1 | NC_023744_p52 | hypothetical protein | phrog_17862 | unknown function | unknown function | 1 | 36971 | 37405 |
| YP_009018714.1 | NC_023744_p26 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 22409 | 22699 |
| YP_009018729.1 | NC_023744_p41 | hypothetical protein | phrog_7061 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32431 | 32637 |
| YP_009018773.1 | NC_023744_p85 | DNA primase | singleton | unknown function | unknown function | 1 | 53804 | 55558 |
| YP_009018702.1 | NC_023744_p14 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 10056 | 10361 |
| YP_009018759.1 | NC_023744_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46438 | 46806 |
| YP_009018696.1 | NC_023744_p8 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 6719 | 6934 |
| YP_009018741.1 | NC_023744_p53 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37402 | 37767 |
| YP_009018777.1 | NC_023744_p89 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56826 | 57761 |
| YP_009018748.1 | NC_023744_p60 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 41278 | 41484 |
| YP_009018708.1 | NC_023744_p20 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 16001 | 16972 |
| YP_009018722.1 | NC_023744_p34 | DNA pol III | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 28680 | 29831 |
| YP_009018766.1 | NC_023744_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51334 | 51417 |
| YP_009018752.1 | NC_023744_p64 | hypothetical protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 42165 | 43073 |
| YP_009018778.1 | NC_023744_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57758 | 57985 |
| YP_009018710.1 | NC_023744_p22 | hypothetical protein | phrog_8122 | minor tail protein | tail | 1 | 18715 | 19122 |
| YP_009018725.1 | NC_023744_p37 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 31428 | 31652 |
| YP_009018771.1 | NC_023744_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52845 | 52976 |
| YP_009018776.1 | NC_023744_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56485 | 56829 |
| YP_009018750.1 | NC_023744_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41681 | 41806 |
| YP_009018731.1 | NC_023744_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32980 | 33321 |
| YP_009018699.1 | NC_023744_p11 | major capsid subunit | phrog_10 | major head protein | head and packaging | 1 | 8184 | 9230 |
| YP_009018693.1 | NC_023744_p5 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1816 | 3612 |
| YP_009018775.1 | NC_023744_p87 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 56210 | 56485 |
| YP_009018728.1 | NC_023744_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32222 | 32434 |
| YP_009018732.1 | NC_023744_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33318 | 33668 |
| YP_009018763.1 | NC_023744_p75 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 49089 | 49295 |
| YP_009018697.1 | NC_023744_p9 | hypothetical protein | phrog_7081 | unknown function | unknown function | -1 | 6980 | 7366 |
| YP_009018758.1 | NC_023744_p70 | MazG | phrog_229 | MazG-like pyrophosphatase | other | 1 | 45911 | 46435 |
| YP_009018690.1 | NC_023744_p2 | hypothetical protein | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 693 | 1319 |
| YP_009018762.1 | NC_023744_p74 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 48826 | 49065 |
| YP_009018749.1 | NC_023744_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41481 | 41684 |
| YP_009018761.1 | NC_023744_p73 | DNA methyltransferase | phrog_67 | DNA methyltransferase | other | 1 | 47459 | 48829 |
| YP_009018719.1 | NC_023744_p31 | hypothetical protein | phrog_102 | endolysin | lysis | 1 | 26756 | 27793 |
| YP_009018735.1 | NC_023744_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34158 | 34313 |
| YP_009018745.1 | NC_023744_p57 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39803 | 40555 |
| YP_009018751.1 | NC_023744_p63 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 41803 | 42168 |
| YP_009018695.1 | NC_023744_p7 | hypothetical protein | phrog_1752 | head maturation protease | head and packaging | 1 | 5169 | 6722 |
| YP_009018716.1 | NC_023744_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24667 | 25017 |
| YP_009018703.1 | NC_023744_p15 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 10364 | 10735 |
| YP_009018724.1 | NC_023744_p36 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30214 | 31425 |
| YP_009018726.1 | NC_023744_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31719 | 31955 |
| YP_009018721.1 | NC_023744_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28114 | 28467 |
| YP_009018782.1 | NC_023744_p94 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58852 | 59097 |
| YP_009018713.1 | NC_023744_p25 | hypothetical protein | phrog_356 | minor tail protein | tail | 1 | 21526 | 22386 |
| YP_009018698.1 | NC_023744_p10 | hypothetical protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7559 | 8122 |
| YP_009018760.1 | NC_023744_p72 | hypothetical protein | phrog_870 | unknown function | unknown function | 1 | 46893 | 47366 |
| YP_009018764.1 | NC_023744_p76 | RtcB | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 49300 | 50502 |
| YP_009018691.1 | NC_023744_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1312 | 1494 |
| YP_009018737.1 | NC_023744_p49 | hypothetical protein | phrog_36180 | unknown function | unknown function | 1 | 34991 | 35539 |
| YP_009018723.1 | NC_023744_p35 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 29978 | 30217 |
| YP_009018736.1 | NC_023744_p48 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34368 | 34784 |
| YP_009018700.1 | NC_023744_p12 | hypothetical protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 9306 | 9719 |
| YP_009018711.1 | NC_023744_p23 | hypothetical protein | phrog_737 | minor tail protein | tail | 1 | 19119 | 21227 |
| YP_009018694.1 | NC_023744_p6 | portal | phrog_104 | portal protein | head and packaging | 1 | 3643 | 5166 |
| YP_009018727.1 | NC_023744_p39 | hypothetical protein | phrog_1498 | unknown function | unknown function | -1 | 32024 | 32218 |
| YP_009018738.1 | NC_023744_p50 | hypothetical protein | phrog_2340 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 35536 | 36210 |
| YP_009018705.1 | NC_023744_p17 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11578 | 12356 |
| YP_009018712.1 | NC_023744_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21224 | 21526 |
| YP_009018720.1 | NC_023744_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27809 | 28111 |
| YP_009018692.1 | NC_023744_p4 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1652 | 1819 |
| YP_009018784.1 | NC_023744_p96 | hypothetical protein | singleton | unknown function | unknown function | 1 | 59468 | 59683 |
| YP_009018734.1 | NC_023744_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33943 | 34203 |
| YP_009018769.1 | NC_023744_p81 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 51791 | 52174 |
| YP_009018755.1 | NC_023744_p67 | hypothetical protein | phrog_6554 | unknown function | unknown function | 1 | 44165 | 44503 |
| YP_009018756.1 | NC_023744_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44500 | 44787 |
| YP_009018772.1 | NC_023744_p84 | hypothetical protein | phrog_11257 | unknown function | unknown function | 1 | 52973 | 53800 |
| YP_009018718.1 | NC_023744_p30 | hypothetical protein | phrog_700 | endolysin | lysis | 1 | 25294 | 26754 |
| YP_009018781.1 | NC_023744_p93 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 58451 | 58804 |
| YP_009018747.1 | NC_023744_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41048 | 41281 |
| YP_009018730.1 | NC_023744_p42 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 32699 | 32980 |
| YP_009018779.1 | NC_023744_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57982 | 58161 |
| YP_009018701.1 | NC_023744_p13 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9721 | 10056 |
| YP_009018765.1 | NC_023744_p77 | DNA primase | phrog_5852 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 50506 | 51303 |
| YP_009018689.1 | NC_023744_p1 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 246 | 680 |
| YP_009018767.1 | NC_023744_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51427 | 51645 |
| YP_009018744.1 | NC_023744_p56 | integrase | phrog_1 | integrase | integration and excision | 1 | 38186 | 39772 |
| YP_009018753.1 | NC_023744_p65 | hypothetical protein | phrog_2286 | unknown function | unknown function | 1 | 43090 | 43806 |
| YP_009018743.1 | NC_023744_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37948 | 38196 |
| YP_009018754.1 | NC_023744_p66 | hypothetical protein | phrog_2702 | unknown function | unknown function | 1 | 43803 | 44168 |
| YP_009018757.1 | NC_023744_p69 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44787 | 45914 |
| YP_009018704.1 | NC_023744_p16 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10775 | 11446 |
| YP_009018746.1 | NC_023744_p58 | hypothetical protein | phrog_12831 | transcriptional repressor | transcription regulation | -1 | 40578 | 41018 |
| YP_009018709.1 | NC_023744_p21 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 16975 | 18714 |
| YP_009018742.1 | NC_023744_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37764 | 37955 |
| YP_009018780.1 | NC_023744_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58158 | 58367 |