| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023747 |
Definition |
Mycobacterium phage BarrelRoll, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
REFSEQ |
Length |
59672 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
66.61 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009019049.1 | NC_023747_p69 | DNA primase/helicase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44793 | 47411 |
| YP_009019047.1 | NC_023747_p67 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 44144 | 44383 |
| YP_009019011.1 | NC_023747_p31 | holin | phrog_565 | holin | lysis | 1 | 27329 | 27769 |
| YP_009019044.1 | NC_023747_p64 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43092 | 43211 |
| YP_009019015.1 | NC_023747_p35 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29746 | 30177 |
| YP_009019037.1 | NC_023747_p57 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40519 | 40785 |
| YP_009019064.1 | NC_023747_p84 | RtcB | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 53915 | 55102 |
| YP_009019065.1 | NC_023747_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55102 | 55476 |
| YP_009018990.1 | NC_023747_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7085 | 7270 |
| YP_009019030.1 | NC_023747_p50 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37599 | 38540 |
| YP_009019041.1 | NC_023747_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42144 | 42338 |
| YP_009019003.1 | NC_023747_p23 | minor tail subunit | phrog_1697 | minor tail protein | tail | 1 | 18906 | 19382 |
| YP_009019058.1 | NC_023747_p78 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51806 | 51934 |
| YP_009019046.1 | NC_023747_p66 | NrdH | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43905 | 44147 |
| YP_009019070.1 | NC_023747_p90 | HTH DNA binding | phrog_5243 | unknown function | unknown function | 1 | 57577 | 57777 |
| YP_009019017.1 | NC_023747_p37 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30528 | 31214 |
| YP_009018984.1 | NC_023747_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 727 | 954 |
| YP_009019034.1 | NC_023747_p54 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39482 | 39760 |
| YP_009019050.1 | NC_023747_p70 | RusA | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47820 | 48518 |
| YP_009019060.1 | NC_023747_p80 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52830 | 53306 |
| YP_009019029.1 | NC_023747_p49 | WhiB | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37339 | 37602 |
| YP_009018986.1 | NC_023747_p6 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 1376 | 1603 |
| YP_009019048.1 | NC_023747_p68 | hypothetical protein | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44380 | 44751 |
| YP_009019038.1 | NC_023747_p58 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40782 | 41102 |
| YP_009019062.1 | NC_023747_p82 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53457 | 53654 |
| YP_009019066.1 | NC_023747_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55476 | 56015 |
| YP_009019006.1 | NC_023747_p26 | minor tail subunit | phrog_346 | minor tail protein | tail | 1 | 20864 | 23296 |
| YP_009019024.1 | NC_023747_p44 | HTH DNA binding domain | phrog_1840 | excisionase | integration and excision | 1 | 35381 | 35647 |
| YP_009018999.1 | NC_023747_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11221 | 11658 |
| YP_009019014.1 | NC_023747_p34 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28345 | 29553 |
| YP_009018997.1 | NC_023747_p17 | major tail subunit | phrog_117 | major tail protein | tail | 1 | 10496 | 11107 |
| YP_009019074.1 | NC_023747_p94 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59132 | 59314 |
| YP_009018987.1 | NC_023747_p7 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1587 | 3008 |
| YP_009019005.1 | NC_023747_p25 | minor tail subunit | phrog_1736 | minor tail protein | tail | 1 | 20555 | 20863 |
| YP_009019051.1 | NC_023747_p71 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48511 | 48972 |
| YP_009018993.1 | NC_023747_p13 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8973 | 9359 |
| YP_009019043.1 | NC_023747_p63 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42877 | 43092 |
| YP_009019056.1 | NC_023747_p76 | SprT | phrog_1006 | unknown function | unknown function | 1 | 50863 | 51324 |
| YP_009019010.1 | NC_023747_p30 | LysB | phrog_102 | endolysin | lysis | 1 | 26446 | 27318 |
| YP_009019054.1 | NC_023747_p74 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50288 | 50521 |
| YP_009019007.1 | NC_023747_p27 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 23308 | 24321 |
| YP_009019018.1 | NC_023747_p38 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 31330 | 31728 |
| YP_009019009.1 | NC_023747_p29 | LysA | phrog_1519 | endolysin | lysis | 1 | 24794 | 26449 |
| YP_009019059.1 | NC_023747_p79 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 51931 | 52833 |
| YP_009019000.1 | NC_023747_p20 | tapemeasure | phrog_971 | endolysin | lysis | 1 | 12068 | 15901 |
| YP_009019033.1 | NC_023747_p53 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39101 | 39481 |
| YP_009019008.1 | NC_023747_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24405 | 24776 |
| YP_009019016.1 | NC_023747_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30162 | 30452 |
| YP_009018991.1 | NC_023747_p11 | scaffolding | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7307 | 7849 |
| YP_009019040.1 | NC_023747_p60 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41260 | 42147 |
| YP_009019004.1 | NC_023747_p24 | minor tail subunit | phrog_1565 | minor tail protein | tail | 1 | 19466 | 20548 |
| YP_009019001.1 | NC_023747_p21 | minor tail subunit | phrog_106 | minor tail protein | tail | 1 | 16003 | 17139 |
| YP_009019021.1 | NC_023747_p41 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33655 | 34494 |
| YP_009019053.1 | NC_023747_p73 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 49169 | 50275 |
| YP_009018985.1 | NC_023747_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1180 | 1383 |
| YP_009018988.1 | NC_023747_p8 | portal | phrog_104 | portal protein | head and packaging | 1 | 3020 | 4573 |
| YP_009018996.1 | NC_023747_p16 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9971 | 10396 |
| YP_009019026.1 | NC_023747_p46 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36178 | 36345 |
| YP_009019025.1 | NC_023747_p45 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35649 | 35999 |
| YP_009019036.1 | NC_023747_p56 | DnaQ-like | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39965 | 40519 |
| YP_009018989.1 | NC_023747_p9 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4518 | 7088 |
| YP_009019022.1 | NC_023747_p42 | HTH DNA binding domain | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34584 | 34964 |
| YP_009019071.1 | NC_023747_p91 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 57899 | 58114 |
| YP_009019032.1 | NC_023747_p52 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38754 | 39104 |
| YP_009019052.1 | NC_023747_p72 | hypothetical protein | phrog_6689 | unknown function | unknown function | 1 | 48969 | 49172 |
| YP_009018982.1 | NC_023747_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 294 | 479 |
| YP_009018994.1 | NC_023747_p14 | hypothetical protein | phrog_763 | head-tail adaptor | connector | 1 | 9356 | 9712 |
| YP_009019028.1 | NC_023747_p48 | HTH DNA binding | phrog_2286 | unknown function | unknown function | 1 | 36551 | 37342 |
| YP_009019019.1 | NC_023747_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 31802 | 32104 |
| YP_009019012.1 | NC_023747_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27772 | 28110 |
| YP_009018995.1 | NC_023747_p15 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 9693 | 9974 |
| YP_009019002.1 | NC_023747_p22 | minor tail subunit | phrog_110 | minor tail protein | tail | 1 | 17140 | 18906 |
| YP_009019063.1 | NC_023747_p83 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 53651 | 53803 |
| YP_009019035.1 | NC_023747_p55 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39757 | 39954 |
| YP_009019027.1 | NC_023747_p47 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36342 | 36554 |
| YP_009019042.1 | NC_023747_p62 | hypothetical protein | phrog_9435 | unknown function | unknown function | 1 | 42392 | 42880 |
| YP_009019031.1 | NC_023747_p51 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38552 | 38722 |
| YP_009018981.1 | NC_023747_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 297 |
| YP_009019055.1 | NC_023747_p75 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50518 | 50790 |
| YP_009019013.1 | NC_023747_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28107 | 28358 |
| YP_009018983.1 | NC_023747_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 476 | 730 |
| YP_009019023.1 | NC_023747_p43 | HTH DNA binding domain | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35124 | 35384 |
| YP_009019045.1 | NC_023747_p65 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43294 | 43803 |
| YP_009019061.1 | NC_023747_p81 | hypothetical protein | phrog_20353 | unknown function | unknown function | 1 | 53281 | 53463 |
| YP_009019057.1 | NC_023747_p77 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51441 | 51719 |
| YP_009019072.1 | NC_023747_p92 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58262 | 58531 |
| YP_009019067.1 | NC_023747_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56008 | 56577 |
| YP_009019069.1 | NC_023747_p89 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 56907 | 57545 |
| YP_009019020.1 | NC_023747_p40 | integrase | phrog_1 | integrase | integration and excision | 1 | 32462 | 33550 |
| YP_009018998.1 | NC_023747_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11221 | 12068 |
| YP_009019073.1 | NC_023747_p93 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 58905 | 59135 |
| YP_009018992.1 | NC_023747_p12 | major capsid | phrog_10 | major head protein | head and packaging | 1 | 7926 | 8861 |
| YP_009019068.1 | NC_023747_p88 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 56574 | 56735 |
| YP_009019075.1 | NC_023747_p95 | HNH endonuclease domain | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59311 | 59613 |
| YP_009019039.1 | NC_023747_p59 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41099 | 41263 |