| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_023863 |
Definition |
Vibrio phage CHOED, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae. |
DB of origin |
REFSEQ |
Length |
66316 |
Host Name |
Vibrio anguillarum |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
43.67 |
Number of singletons |
61 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_009021681.1 | NC_023863_p15 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14025 | 14546 |
| YP_009021736.1 | NC_023863_p70 | hypothetical protein | singleton | unknown function | unknown function | -1 | 44000 | 44218 |
| YP_009021749.1 | NC_023863_p80 | streptomycin biosynthesis operon regulatory protein | singleton | unknown function | unknown function | -1 | 51925 | 53073 |
| YP_009021704.1 | NC_023863_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28069 | 28347 |
| YP_009021737.1 | NC_023863_p71 | cell wall hydrolase | phrog_938 | endolysin | lysis | -1 | 45712 | 46155 |
| YP_009021738.2 | NC_023863_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46181 | 46360 |
| YP_009021668.1 | NC_023863_p2 | hypothetical protein | phrog_34933 | unknown function | unknown function | 1 | 1890 | 2201 |
| YP_009021699.1 | NC_023863_p33 | hypothetical protein | phrog_11573 | unknown function | unknown function | -1 | 25561 | 26034 |
| YP_009021705.1 | NC_023863_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28344 | 28547 |
| YP_009021752.1 | NC_023863_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55277 | 55660 |
| YP_009021740.1 | NC_023863_p74 | hypothetical protein | phrog_624 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 46755 | 47240 |
| YP_009021696.1 | NC_023863_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24417 | 24626 |
| YP_009021698.1 | NC_023863_p32 | hypothetical protein | singleton | unknown function | unknown function | -1 | 25333 | 25503 |
| YP_009021686.1 | NC_023863_p20 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19121 | 19507 |
| YP_009021734.1 | NC_023863_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43718 | 43858 |
| YP_009021726.1 | NC_023863_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40112 | 40429 |
| YP_009021676.1 | NC_023863_p10 | hypothetical protein | phrog_10745 | unknown function | unknown function | 1 | 9032 | 10075 |
| YP_009021701.1 | NC_023863_p35 | hypothetical protein | phrog_4256 | unknown function | unknown function | -1 | 27324 | 27641 |
| YP_009021700.1 | NC_023863_p34 | 5 -3 exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 26135 | 27217 |
| YP_009021695.1 | NC_023863_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 24151 | 24363 |
| YP_009021677.1 | NC_023863_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10127 | 10879 |
| YP_009021679.1 | NC_023863_p13 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12221 | 13603 |
| YP_009021708.1 | NC_023863_p42 | DNA primase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 31491 | 33218 |
| YP_009021680.1 | NC_023863_p14 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13615 | 14025 |
| YP_009021746.1 | NC_023863_p77 | hypothetical protein | singleton | unknown function | unknown function | -1 | 50928 | 51077 |
| YP_009021692.1 | NC_023863_p26 | thymidine kinase | phrog_592 | thymidine kinase | other | -1 | 23076 | 23642 |
| YP_009021728.1 | NC_023863_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40974 | 41426 |
| YP_009021688.1 | NC_023863_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19996 | 21276 |
| YP_009021693.1 | NC_023863_p27 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23647 | 23883 |
| YP_009021716.1 | NC_023863_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35930 | 36166 |
| YP_009021739.1 | NC_023863_p73 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46508 | 46639 |
| YP_009021671.1 | NC_023863_p5 | hypothetical protein | phrog_10775 | tail protein | tail | 1 | 3584 | 4294 |
| YP_009021754.1 | NC_023863_p85 | terminase-like family protein | phrog_979 | terminase large subunit | head and packaging | 1 | 57161 | 59167 |
| YP_009021753.1 | NC_023863_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56741 | 57115 |
| YP_009021727.1 | NC_023863_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 40512 | 40961 |
| YP_009021759.1 | NC_023863_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 63661 | 65181 |
| YP_009021710.1 | NC_023863_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33518 | 33703 |
| YP_009021711.1 | NC_023863_p45 | RNA ligase 2 | phrog_548 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 33762 | 34910 |
| YP_009021678.1 | NC_023863_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 10890 | 12191 |
| YP_009021741.1 | NC_023863_p75 | hypothetical protein | singleton | unknown function | unknown function | -1 | 47305 | 47622 |
| YP_009021707.1 | NC_023863_p41 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29178 | 31421 |
| YP_009021760.1 | NC_023863_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65178 | 65357 |
| YP_009021712.1 | NC_023863_p46 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34904 | 35158 |
| YP_009021667.1 | NC_023863_p1 | hypothetical protein | phrog_10818 | unknown function | unknown function | 1 | 4 | 1893 |
| YP_009021670.1 | NC_023863_p4 | hypothetical protein | phrog_717 | unknown function | unknown function | 1 | 3339 | 3569 |
| YP_009021709.1 | NC_023863_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33227 | 33466 |
| YP_009021706.1 | NC_023863_p40 | HNH endonuclease | phrog_6254 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 28537 | 29196 |
| YP_009021722.1 | NC_023863_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37338 | 37709 |
| YP_009021719.1 | NC_023863_p53 | hypothetical protein | phrog_15775 | unknown function | unknown function | -1 | 36594 | 36785 |
| YP_009021721.1 | NC_023863_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36998 | 37336 |
| YP_009021682.1 | NC_023863_p16 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14546 | 16060 |
| YP_009021702.1 | NC_023863_p36 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27641 | 27844 |
| YP_009021751.1 | NC_023863_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54400 | 54543 |
| YP_009021735.1 | NC_023863_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 43860 | 44000 |
| YP_009021723.1 | NC_023863_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37711 | 38121 |
| YP_009021715.1 | NC_023863_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35685 | 35936 |
| YP_009021747.1 | NC_023863_p78 | p10-like protein | singleton | unknown function | unknown function | -1 | 51392 | 51661 |
| YP_009021755.1 | NC_023863_p86 | portal protein | phrog_332 | head-tail adaptor | connector | 1 | 59210 | 61321 |
| YP_009021672.1 | NC_023863_p6 | dimodular nonribosomal peptide synthetase | phrog_5107 | amidase | lysis | 1 | 4294 | 5853 |
| YP_009021729.1 | NC_023863_p63 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41481 | 41693 |
| YP_009021675.1 | NC_023863_p9 | tail fiber repeat family protein | phrog_14064 | tail fiber protein | tail | 1 | 6388 | 9024 |
| YP_009021733.1 | NC_023863_p67 | hypothetical protein | phrog_9123 | unknown function | unknown function | -1 | 43536 | 43718 |
| YP_009021691.1 | NC_023863_p25 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22570 | 23010 |
| YP_009021714.1 | NC_023863_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35461 | 35694 |
| YP_009021758.1 | NC_023863_p89 | p22 coat protein | phrog_267 | major head protein | head and packaging | 1 | 62412 | 63584 |
| YP_009021720.1 | NC_023863_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36778 | 36996 |
| YP_009021669.1 | NC_023863_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2389 | 3249 |
| YP_009021673.1 | NC_023863_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5856 | 6065 |
| YP_009021689.1 | NC_023863_p23 | ATP-dependent DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | -1 | 21273 | 22346 |
| YP_009021724.1 | NC_023863_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 38187 | 38687 |
| YP_009021694.1 | NC_023863_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23888 | 24133 |
| YP_009021750.1 | NC_023863_p81 | s-adenosyl-l-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | -1 | 53151 | 53558 |
| YP_009021742.2 | NC_023863_p76 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 47640 | 50832 |
| YP_009021725.1 | NC_023863_p59 | hypothetical protein | phrog_11908 | unknown function | unknown function | -1 | 38784 | 40052 |
| YP_009021703.1 | NC_023863_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 27834 | 28076 |
| YP_009021687.1 | NC_023863_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19509 | 19943 |
| YP_009021685.1 | NC_023863_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18895 | 19119 |
| YP_009021731.1 | NC_023863_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42473 | 42757 |
| YP_009021713.1 | NC_023863_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35159 | 35449 |
| YP_009021730.1 | NC_023863_p64 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 41759 | 42262 |
| YP_009021748.1 | NC_023863_p79 | hypothetical protein | singleton | unknown function | unknown function | -1 | 51658 | 51843 |
| YP_009021718.1 | NC_023863_p52 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36448 | 36615 |
| YP_009021684.1 | NC_023863_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18579 | 18851 |
| YP_009021674.1 | NC_023863_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6065 | 6388 |
| YP_009021756.1 | NC_023863_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61323 | 61553 |
| YP_009021732.1 | NC_023863_p66 | hypothetical protein | phrog_17203 | unknown function | unknown function | -1 | 42917 | 43501 |
| YP_009021717.1 | NC_023863_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36166 | 36360 |
| YP_009021757.1 | NC_023863_p88 | hypothetical protein | phrog_13678 | unknown function | unknown function | 1 | 61645 | 62385 |
| YP_009021683.1 | NC_023863_p17 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16073 | 18526 |
| YP_009021690.1 | NC_023863_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22355 | 22558 |
| YP_009021697.1 | NC_023863_p31 | deoxynucleoside-5-monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 24623 | 25336 |